starting build "373e6466-ddd7-401d-ad60-88c99d172812" FETCHSOURCE BUILD Starting Step #0 Step #0: Already have image (with digest): gcr.io/cloud-builders/git Step #0: Cloning into 'oss-fuzz'... Finished Step #0 Starting Step #1 Step #1: Already have image (with digest): gcr.io/cloud-builders/docker Step #1: Sending build context to Docker daemon 5.12kB Step #1: Step 1/5 : FROM gcr.io/oss-fuzz-base/base-builder Step #1: latest: Pulling from oss-fuzz-base/base-builder Step #1: b549f31133a9: Pulling fs layer Step #1: 800687449569: Pulling fs layer Step #1: 67cc84ed39bf: Pulling fs layer Step #1: 33c4464df317: Pulling fs layer Step #1: 7a3d59ffed63: Pulling fs layer Step #1: bc24bccd8f7c: Pulling fs layer Step #1: 18d20619fb8d: Pulling fs layer Step #1: 0ec212d79142: Pulling fs layer Step #1: 0d731e844f5b: Pulling fs layer Step #1: 03e6d4298870: Pulling fs layer Step #1: 9cb6c9480ffe: Pulling fs layer Step #1: 636367483a85: Pulling fs layer Step #1: ab160a08f40f: Pulling fs layer Step #1: d56fb1501120: Pulling fs layer Step #1: 6e5ee80d4b76: Pulling fs layer Step #1: 069b70ca1828: Pulling fs layer Step #1: 082a5c4ba783: Pulling fs layer Step #1: 33c4464df317: Waiting Step #1: aeb889ce9374: Pulling fs layer Step #1: b3c77a307741: Pulling fs layer Step #1: 19afa95abd0d: Pulling fs layer Step #1: 7a3d59ffed63: Waiting Step #1: bc24bccd8f7c: Waiting Step #1: 18d20619fb8d: Waiting Step #1: 3331bfca5447: Pulling fs layer Step #1: ca89507fe8d3: Pulling fs layer Step #1: 093d0a8d4813: Pulling fs layer Step #1: 9cb6c9480ffe: Waiting Step #1: 562130e5e1f0: Pulling fs layer Step #1: c78d65770fdc: Pulling fs layer Step #1: 636367483a85: Waiting Step #1: d8a48a39f3bb: Pulling fs layer Step #1: d547270a8392: Pulling fs layer Step #1: ab160a08f40f: Waiting Step #1: 0ec212d79142: Waiting Step #1: cd72b15f7674: Pulling fs layer Step #1: 082a5c4ba783: Waiting Step #1: fed123fa2f8a: Pulling fs layer Step #1: 39a8609a58c5: Pulling fs layer Step #1: 0d731e844f5b: Waiting Step #1: d56fb1501120: Waiting Step #1: b3c77a307741: Waiting Step #1: aeb889ce9374: Waiting Step #1: 069b70ca1828: Waiting Step #1: 3331bfca5447: Waiting Step #1: ca89507fe8d3: Waiting Step #1: 093d0a8d4813: Waiting Step #1: d8a48a39f3bb: Waiting Step #1: 562130e5e1f0: Waiting Step #1: d547270a8392: Waiting Step #1: c78d65770fdc: Waiting Step #1: cd72b15f7674: Waiting Step #1: fed123fa2f8a: Waiting Step #1: 39a8609a58c5: Waiting Step #1: 03e6d4298870: Waiting Step #1: 19afa95abd0d: Waiting Step #1: 67cc84ed39bf: Verifying Checksum Step #1: 67cc84ed39bf: Download complete Step #1: b549f31133a9: Verifying Checksum Step #1: b549f31133a9: Download complete Step #1: 33c4464df317: Verifying Checksum Step #1: 33c4464df317: Download complete Step #1: 7a3d59ffed63: Verifying Checksum Step #1: 7a3d59ffed63: Download complete Step #1: bc24bccd8f7c: Download complete Step #1: 0ec212d79142: Verifying Checksum Step #1: 0ec212d79142: Download complete Step #1: 0d731e844f5b: Download complete Step #1: 800687449569: Verifying Checksum Step #1: 800687449569: Download complete Step #1: 9cb6c9480ffe: Verifying Checksum Step #1: 9cb6c9480ffe: Download complete Step #1: 636367483a85: Download complete Step #1: ab160a08f40f: Verifying Checksum Step #1: ab160a08f40f: Download complete Step #1: d56fb1501120: Verifying Checksum Step #1: d56fb1501120: Download complete Step #1: 6e5ee80d4b76: Verifying Checksum Step #1: 6e5ee80d4b76: Download complete Step #1: b549f31133a9: Pull complete Step #1: 069b70ca1828: Verifying Checksum Step #1: 069b70ca1828: Download complete Step #1: 082a5c4ba783: Verifying Checksum Step #1: 082a5c4ba783: Download complete Step #1: aeb889ce9374: Verifying Checksum Step #1: aeb889ce9374: Download complete Step #1: b3c77a307741: Verifying Checksum Step #1: b3c77a307741: Download complete Step #1: 19afa95abd0d: Verifying Checksum Step #1: 19afa95abd0d: Download complete Step #1: 3331bfca5447: Verifying Checksum Step #1: 3331bfca5447: Download complete Step #1: 03e6d4298870: Download complete Step #1: 093d0a8d4813: Verifying Checksum Step #1: 093d0a8d4813: Download complete Step #1: ca89507fe8d3: Verifying Checksum Step #1: ca89507fe8d3: Download complete Step #1: 562130e5e1f0: Verifying Checksum Step #1: 562130e5e1f0: Download complete Step #1: c78d65770fdc: Verifying Checksum Step #1: c78d65770fdc: Download complete Step #1: d8a48a39f3bb: Verifying Checksum Step #1: d8a48a39f3bb: Download complete Step #1: cd72b15f7674: Download complete Step #1: d547270a8392: Download complete Step #1: fed123fa2f8a: Verifying Checksum Step #1: fed123fa2f8a: Download complete Step #1: 39a8609a58c5: Verifying Checksum Step #1: 39a8609a58c5: Download complete Step #1: 18d20619fb8d: Verifying Checksum Step #1: 18d20619fb8d: Download complete Step #1: 800687449569: Pull complete Step #1: 67cc84ed39bf: Pull complete Step #1: 33c4464df317: Pull complete Step #1: 7a3d59ffed63: Pull complete Step #1: bc24bccd8f7c: Pull complete Step #1: 18d20619fb8d: Pull complete Step #1: 0ec212d79142: Pull complete Step #1: 0d731e844f5b: Pull complete Step #1: 03e6d4298870: Pull complete Step #1: 9cb6c9480ffe: Pull complete Step #1: 636367483a85: Pull complete Step #1: ab160a08f40f: Pull complete Step #1: d56fb1501120: Pull complete Step #1: 6e5ee80d4b76: Pull complete Step #1: 069b70ca1828: Pull complete Step #1: 082a5c4ba783: Pull complete Step #1: aeb889ce9374: Pull complete Step #1: b3c77a307741: Pull complete Step #1: 19afa95abd0d: Pull complete Step #1: 3331bfca5447: Pull complete Step #1: ca89507fe8d3: Pull complete Step #1: 093d0a8d4813: Pull complete Step #1: 562130e5e1f0: Pull complete Step #1: c78d65770fdc: Pull complete Step #1: d8a48a39f3bb: Pull complete Step #1: d547270a8392: Pull complete Step #1: cd72b15f7674: Pull complete Step #1: fed123fa2f8a: Pull complete Step #1: 39a8609a58c5: Pull complete Step #1: Digest: sha256:e8550ff2b57077cb14770e2ec5a77bdcd040c602412df65fe7355825f55ed250 Step #1: Status: Downloaded newer image for gcr.io/oss-fuzz-base/base-builder:latest Step #1: ---> d548bd1f3608 Step #1: Step 2/5 : RUN apt-get update && apt-get install -y make autoconf automake zlib1g-dev libbz2-dev liblzma-dev libcurl4-gnutls-dev libssl-dev Step #1: ---> Running in f12b27d20962 Step #1: Hit:1 http://archive.ubuntu.com/ubuntu focal InRelease Step #1: Hit:2 http://security.ubuntu.com/ubuntu focal-security InRelease Step #1: Get:3 http://archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB] Step #1: Hit:4 http://archive.ubuntu.com/ubuntu focal-backports InRelease Step #1: Fetched 114 kB in 1s (118 kB/s) Step #1: Reading package lists... Step #1: Reading package lists... Step #1: Building dependency tree... Step #1: Reading state information... Step #1: make is already the newest version (4.2.1-1.2). Step #1: make set to manually installed. Step #1: libssl-dev is already the newest version (1.1.1f-1ubuntu2.20). Step #1: The following additional packages will be installed: Step #1: autotools-dev bzip2-doc libsigsegv2 m4 Step #1: Suggested packages: Step #1: autoconf-archive gnu-standards autoconf-doc libtool gettext libcurl4-doc Step #1: libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev Step #1: libssh2-1-dev pkg-config liblzma-doc m4-doc Step #1: The following NEW packages will be installed: Step #1: autoconf automake autotools-dev bzip2-doc libbz2-dev libcurl4-gnutls-dev Step #1: liblzma-dev libsigsegv2 m4 zlib1g-dev Step #1: 0 upgraded, 10 newly installed, 0 to remove and 0 not upgraded. Step #1: Need to get 2248 kB of archives. Step #1: After this operation, 7511 kB of additional disk space will be used. Step #1: Get:1 http://archive.ubuntu.com/ubuntu focal/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB] Step #1: Get:2 http://archive.ubuntu.com/ubuntu focal/main amd64 m4 amd64 1.4.18-4 [199 kB] Step #1: Get:3 http://archive.ubuntu.com/ubuntu focal/main amd64 autoconf all 2.69-11.1 [321 kB] Step #1: Get:4 http://archive.ubuntu.com/ubuntu focal/main amd64 autotools-dev all 20180224.1 [39.6 kB] Step #1: Get:5 http://archive.ubuntu.com/ubuntu focal/main amd64 automake all 1:1.16.1-4ubuntu6 [522 kB] Step #1: Get:6 http://archive.ubuntu.com/ubuntu focal/main amd64 bzip2-doc all 1.0.8-2 [501 kB] Step #1: Get:7 http://archive.ubuntu.com/ubuntu focal/main amd64 libbz2-dev amd64 1.0.8-2 [30.2 kB] Step #1: Get:8 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-gnutls-dev amd64 7.68.0-1ubuntu2.20 [320 kB] Step #1: Get:9 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2ubuntu1.5 [155 kB] Step #1: Get:10 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 liblzma-dev amd64 5.2.4-1ubuntu1.1 [147 kB] Step #1: debconf: delaying package configuration, since apt-utils is not installed Step #1: Fetched 2248 kB in 1s (2074 kB/s) Step #1: Selecting previously unselected package libsigsegv2:amd64. Step #1: (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17382 files and directories currently installed.) Step #1: Preparing to unpack .../0-libsigsegv2_2.12-2_amd64.deb ... Step #1: Unpacking libsigsegv2:amd64 (2.12-2) ... Step #1: Selecting previously unselected package m4. Step #1: Preparing to unpack .../1-m4_1.4.18-4_amd64.deb ... Step #1: Unpacking m4 (1.4.18-4) ... Step #1: Selecting previously unselected package autoconf. Step #1: Preparing to unpack .../2-autoconf_2.69-11.1_all.deb ... Step #1: Unpacking autoconf (2.69-11.1) ... Step #1: Selecting previously unselected package autotools-dev. Step #1: Preparing to unpack .../3-autotools-dev_20180224.1_all.deb ... Step #1: Unpacking autotools-dev (20180224.1) ... Step #1: Selecting previously unselected package automake. Step #1: Preparing to unpack .../4-automake_1%3a1.16.1-4ubuntu6_all.deb ... Step #1: Unpacking automake (1:1.16.1-4ubuntu6) ... Step #1: Selecting previously unselected package bzip2-doc. Step #1: Preparing to unpack .../5-bzip2-doc_1.0.8-2_all.deb ... Step #1: Unpacking bzip2-doc (1.0.8-2) ... Step #1: Selecting previously unselected package libbz2-dev:amd64. Step #1: Preparing to unpack .../6-libbz2-dev_1.0.8-2_amd64.deb ... Step #1: Unpacking libbz2-dev:amd64 (1.0.8-2) ... Step #1: Selecting previously unselected package libcurl4-gnutls-dev:amd64. Step #1: Preparing to unpack .../7-libcurl4-gnutls-dev_7.68.0-1ubuntu2.20_amd64.deb ... Step #1: Unpacking libcurl4-gnutls-dev:amd64 (7.68.0-1ubuntu2.20) ... Step #1: Selecting previously unselected package zlib1g-dev:amd64. Step #1: Preparing to unpack .../8-zlib1g-dev_1%3a1.2.11.dfsg-2ubuntu1.5_amd64.deb ... Step #1: Unpacking zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu1.5) ... Step #1: Selecting previously unselected package liblzma-dev:amd64. Step #1: Preparing to unpack .../9-liblzma-dev_5.2.4-1ubuntu1.1_amd64.deb ... Step #1: Unpacking liblzma-dev:amd64 (5.2.4-1ubuntu1.1) ... Step #1: Setting up bzip2-doc (1.0.8-2) ... Step #1: Setting up libcurl4-gnutls-dev:amd64 (7.68.0-1ubuntu2.20) ... Step #1: Setting up autotools-dev (20180224.1) ... Step #1: Setting up libsigsegv2:amd64 (2.12-2) ... Step #1: Setting up liblzma-dev:amd64 (5.2.4-1ubuntu1.1) ... Step #1: Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu1.5) ... Step #1: Setting up libbz2-dev:amd64 (1.0.8-2) ... Step #1: Setting up m4 (1.4.18-4) ... Step #1: Setting up autoconf (2.69-11.1) ... Step #1: Setting up automake (1:1.16.1-4ubuntu6) ... Step #1: update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Step #1: update-alternatives: warning: skip creation of /usr/share/man/man1/automake.1.gz because associated file /usr/share/man/man1/automake-1.16.1.gz (of link group automake) doesn't exist Step #1: update-alternatives: warning: skip creation of /usr/share/man/man1/aclocal.1.gz because associated file /usr/share/man/man1/aclocal-1.16.1.gz (of link group automake) doesn't exist Step #1: Processing triggers for libc-bin (2.31-0ubuntu9.12) ... Step #1: Removing intermediate container f12b27d20962 Step #1: ---> c0ee01105473 Step #1: Step 3/5 : RUN git clone --depth 1 --shallow-submodules --recurse-submodules https://github.com/samtools/htslib.git htslib Step #1: ---> Running in 5716ff327c24 Step #1: Cloning into 'htslib'... Step #1: Submodule 'htscodecs' (https://github.com/samtools/htscodecs.git) registered for path 'htscodecs' Step #1: Cloning into '/src/htslib/htscodecs'... Step #1: From https://github.com/samtools/htscodecs Step #1: * branch 2aca18b335bc2b580698e487092b794c514ac62c -> FETCH_HEAD Step #1: Submodule path 'htscodecs': checked out '2aca18b335bc2b580698e487092b794c514ac62c' Step #1: Removing intermediate container 5716ff327c24 Step #1: ---> 838b70e82ae9 Step #1: Step 4/5 : WORKDIR htslib Step #1: ---> Running in 42f47705f4f2 Step #1: Removing intermediate container 42f47705f4f2 Step #1: ---> 0e32dfd43082 Step #1: Step 5/5 : COPY build.sh $SRC/ Step #1: ---> 1c793fc32718 Step #1: Successfully built 1c793fc32718 Step #1: Successfully tagged gcr.io/oss-fuzz/htslib:latest Finished Step #1 Starting Step #2 - "srcmap" Step #2 - "srcmap": Already have image: gcr.io/oss-fuzz/htslib Step #2 - "srcmap": ++ tempfile Step #2 - "srcmap": + SRCMAP=/tmp/fileR6Xp9L Step #2 - "srcmap": + echo '{}' Step #2 - "srcmap": + PATHS_TO_SCAN=/src Step #2 - "srcmap": + [[ c++ == \g\o ]] Step #2 - "srcmap": ++ find /src -name .git -type d Step #2 - "srcmap": + for DOT_GIT_DIR in $(find $PATHS_TO_SCAN -name ".git" -type d) Step #2 - "srcmap": ++ dirname /src/htslib/.git Step #2 - "srcmap": + GIT_DIR=/src/htslib Step #2 - "srcmap": + cd /src/htslib Step #2 - "srcmap": ++ git config --get remote.origin.url Step #2 - "srcmap": + GIT_URL=https://github.com/samtools/htslib.git Step #2 - "srcmap": ++ git rev-parse HEAD Step #2 - "srcmap": + GIT_REV=d1aae5214012f764740eba65f8b47182ea3bd8e0 Step #2 - "srcmap": + jq_inplace /tmp/fileR6Xp9L '."/src/htslib" = { type: "git", url: "https://github.com/samtools/htslib.git", rev: "d1aae5214012f764740eba65f8b47182ea3bd8e0" }' Step #2 - "srcmap": ++ tempfile Step #2 - "srcmap": + F=/tmp/file3ufe0c Step #2 - "srcmap": + cat /tmp/fileR6Xp9L Step #2 - "srcmap": + jq '."/src/htslib" = { type: "git", url: "https://github.com/samtools/htslib.git", rev: "d1aae5214012f764740eba65f8b47182ea3bd8e0" }' Step #2 - "srcmap": + mv /tmp/file3ufe0c /tmp/fileR6Xp9L Step #2 - "srcmap": ++ find /src -name .svn -type d Step #2 - "srcmap": ++ find /src -name .hg -type d Step #2 - "srcmap": + '[' '' '!=' '' ']' Step #2 - "srcmap": + cat /tmp/fileR6Xp9L Step #2 - "srcmap": + rm /tmp/fileR6Xp9L Step #2 - "srcmap": { Step #2 - "srcmap": "/src/htslib": { Step #2 - "srcmap": "type": "git", Step #2 - "srcmap": "url": "https://github.com/samtools/htslib.git", Step #2 - "srcmap": "rev": "d1aae5214012f764740eba65f8b47182ea3bd8e0" Step #2 - "srcmap": } Step #2 - "srcmap": } Finished Step #2 - "srcmap" Starting Step #3 - "compile-afl-address-x86_64" Step #3 - "compile-afl-address-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #3 - "compile-afl-address-x86_64": --------------------------------------------------------------- Step #3 - "compile-afl-address-x86_64": Copying precompiled AFL++ Step #3 - "compile-afl-address-x86_64": Step #3 - "compile-afl-address-x86_64": AFL++ target compilation setup: Step #3 - "compile-afl-address-x86_64": AFL_IGNORE_UNKNOWN_ENVS=1 Step #3 - "compile-afl-address-x86_64": AFL_QUIET=1 Step #3 - "compile-afl-address-x86_64": AFL_IGNORE_PROBLEMS=1 Step #3 - "compile-afl-address-x86_64": Step #3 - "compile-afl-address-x86_64": done. Step #3 - "compile-afl-address-x86_64": --------------------------------------------------------------- Step #3 - "compile-afl-address-x86_64": CC=/src/aflplusplus/afl-clang-fast Step #3 - "compile-afl-address-x86_64": CXX=/src/aflplusplus/afl-clang-fast++ Step #3 - "compile-afl-address-x86_64": CFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope Step #3 - "compile-afl-address-x86_64": CXXFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -stdlib=libc++ Step #3 - "compile-afl-address-x86_64": RUSTFLAGS=--cfg fuzzing -Zsanitizer=address -Cdebuginfo=1 -Cforce-frame-pointers Step #3 - "compile-afl-address-x86_64": --------------------------------------------------------------- Step #3 - "compile-afl-address-x86_64": + autoconf Step #3 - "compile-afl-address-x86_64": + autoheader Step #3 - "compile-afl-address-x86_64": + ./configure Step #3 - "compile-afl-address-x86_64": checking for gcc... /src/aflplusplus/afl-clang-fast Step #3 - "compile-afl-address-x86_64": checking whether the C compiler works... yes Step #3 - "compile-afl-address-x86_64": checking for C compiler default output file name... a.out Step #3 - "compile-afl-address-x86_64": checking for suffix of executables... Step #3 - "compile-afl-address-x86_64": checking whether we are cross compiling... no Step #3 - "compile-afl-address-x86_64": checking for suffix of object files... o Step #3 - "compile-afl-address-x86_64": checking whether we are using the GNU C compiler... yes Step #3 - "compile-afl-address-x86_64": checking whether /src/aflplusplus/afl-clang-fast accepts -g... yes Step #3 - "compile-afl-address-x86_64": checking for /src/aflplusplus/afl-clang-fast option to accept ISO C89... none needed Step #3 - "compile-afl-address-x86_64": checking for ranlib... ranlib Step #3 - "compile-afl-address-x86_64": checking for grep that handles long lines and -e... /usr/bin/grep Step #3 - "compile-afl-address-x86_64": checking for C compiler warning flags... -Wall Step #3 - "compile-afl-address-x86_64": checking how to run the C preprocessor... /src/aflplusplus/afl-clang-fast -E Step #3 - "compile-afl-address-x86_64": checking for egrep... /usr/bin/grep -E Step #3 - "compile-afl-address-x86_64": checking for ANSI C header files... yes Step #3 - "compile-afl-address-x86_64": checking for sys/types.h... yes Step #3 - "compile-afl-address-x86_64": checking for sys/stat.h... yes Step #3 - "compile-afl-address-x86_64": checking for stdlib.h... yes Step #3 - "compile-afl-address-x86_64": checking for string.h... yes Step #3 - "compile-afl-address-x86_64": checking for memory.h... yes Step #3 - "compile-afl-address-x86_64": checking for strings.h... yes Step #3 - "compile-afl-address-x86_64": checking for inttypes.h... yes Step #3 - "compile-afl-address-x86_64": checking for stdint.h... yes Step #3 - "compile-afl-address-x86_64": checking for unistd.h... yes Step #3 - "compile-afl-address-x86_64": checking whether _XOPEN_SOURCE is declared... no Step #3 - "compile-afl-address-x86_64": checking C compiler flags needed for sse4.1... -msse4.1 -mssse3 -mpopcnt Step #3 - "compile-afl-address-x86_64": checking C compiler flags needed for avx2... -mavx2 -mpopcnt Step #3 - "compile-afl-address-x86_64": checking C compiler flags needed for avx512f... -mavx512f -mpopcnt Step #3 - "compile-afl-address-x86_64": checking for pkg-config... no Step #3 - "compile-afl-address-x86_64": checking for special C compiler options needed for large files... no Step #3 - "compile-afl-address-x86_64": checking for _FILE_OFFSET_BITS value needed for large files... no Step #3 - "compile-afl-address-x86_64": checking shared library type for unknown-Linux... plain .so Step #3 - "compile-afl-address-x86_64": checking whether the linker supports versioned symbols... yes Step #3 - "compile-afl-address-x86_64": checking whether the compiler accepts -fvisibility=hidden... yes Step #3 - "compile-afl-address-x86_64": checking for stdlib.h... (cached) yes Step #3 - "compile-afl-address-x86_64": checking for unistd.h... (cached) yes Step #3 - "compile-afl-address-x86_64": checking for sys/param.h... yes Step #3 - "compile-afl-address-x86_64": checking for getpagesize... yes Step #3 - "compile-afl-address-x86_64": checking for working mmap... yes Step #3 - "compile-afl-address-x86_64": checking for gmtime_r... yes Step #3 - "compile-afl-address-x86_64": checking for fsync... yes Step #3 - "compile-afl-address-x86_64": checking for drand48... yes Step #3 - "compile-afl-address-x86_64": checking for srand48_deterministic... no Step #3 - "compile-afl-address-x86_64": checking whether fdatasync is declared... yes Step #3 - "compile-afl-address-x86_64": checking for fdatasync... yes Step #3 - "compile-afl-address-x86_64": checking for library containing log... none required Step #3 - "compile-afl-address-x86_64": checking for zlib.h... yes Step #3 - "compile-afl-address-x86_64": checking for inflate in -lz... yes Step #3 - "compile-afl-address-x86_64": checking for library containing recv... none required Step #3 - "compile-afl-address-x86_64": checking for bzlib.h... yes Step #3 - "compile-afl-address-x86_64": checking for BZ2_bzBuffToBuffCompress in -lbz2... yes Step #3 - "compile-afl-address-x86_64": checking for lzma.h... yes Step #3 - "compile-afl-address-x86_64": checking for lzma_easy_buffer_encode in -llzma... yes Step #3 - "compile-afl-address-x86_64": checking whether htscodecs files are present... yes Step #3 - "compile-afl-address-x86_64": checking for libdeflate.h... no Step #3 - "compile-afl-address-x86_64": checking for libdeflate_deflate_compress in -ldeflate... no Step #3 - "compile-afl-address-x86_64": checking for curl/curl.h... yes Step #3 - "compile-afl-address-x86_64": checking for curl_easy_pause in -lcurl... yes Step #3 - "compile-afl-address-x86_64": checking for CCHmac... no Step #3 - "compile-afl-address-x86_64": checking for library containing HMAC... -lcrypto Step #3 - "compile-afl-address-x86_64": checking for library containing regcomp... none required Step #3 - "compile-afl-address-x86_64": configure: creating ./config.status Step #3 - "compile-afl-address-x86_64": config.status: creating config.mk Step #3 - "compile-afl-address-x86_64": config.status: creating htslib.pc.tmp Step #3 - "compile-afl-address-x86_64": config.status: creating config.h Step #3 - "compile-afl-address-x86_64": config.status: linking htscodecs_bundled.mk to htscodecs.mk Step #3 - "compile-afl-address-x86_64": ++ nproc Step #3 - "compile-afl-address-x86_64": + make -j32 libhts.a test/fuzz/hts_open_fuzzer.o Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o kfunc.o kfunc.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o kstring.o kstring.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o bcf_sr_sort.o bcf_sr_sort.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o bgzf.o bgzf.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o errmod.o errmod.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o faidx.o faidx.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o header.o header.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o hfile.o hfile.c Step #3 - "compile-afl-address-x86_64": echo '#define HTS_VERSION_TEXT "1.18-1-gd1aae52"' > version.h Step #3 - "compile-afl-address-x86_64": printf '#define HTS_CC "%s"\n#define HTS_CPPFLAGS "%s"\n#define HTS_CFLAGS "%s"\n#define HTS_LDFLAGS "%s"\n#define HTS_LIBS "%s"\n' \ Step #3 - "compile-afl-address-x86_64": '/src/aflplusplus/afl-clang-fast' \ Step #3 - "compile-afl-address-x86_64": '' \ Step #3 - "compile-afl-address-x86_64": '-Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden' \ Step #3 - "compile-afl-address-x86_64": '-fvisibility=hidden ' \ Step #3 - "compile-afl-address-x86_64": '-llzma -lbz2 -lz -lcurl -lcrypto' > config_vars.h Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o hts_expr.o hts_expr.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o hts_os.o hts_os.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o md5.o md5.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o multipart.o multipart.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o probaln.o probaln.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o realn.o realn.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o regidx.o regidx.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o region.o region.c Step #3 - "compile-afl-address-x86_64": awk: line 1: syntax error at or near , Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o sam.o sam.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o sam_mods.o sam_mods.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o synced_bcf_reader.o synced_bcf_reader.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o vcf_sweep.o vcf_sweep.c Step #3 - "compile-afl-address-x86_64": Updating htscodecs/htscodecs/version.h : #define HTSCODECS_VERSION_TEXT "-g2aca18b" Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o tbx.o tbx.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o textutils.o textutils.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o thread_pool.o thread_pool.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o vcf.o vcf.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o vcfutils.o vcfutils.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/cram_codecs.o cram/cram_codecs.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/cram_decode.o cram/cram_decode.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/cram_encode.o cram/cram_encode.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/cram_external.o cram/cram_external.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/cram_index.o cram/cram_index.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/cram_io.o cram/cram_io.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/cram_stats.o cram/cram_stats.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/mFILE.o cram/mFILE.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/open_trace_file.o cram/open_trace_file.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/pooled_alloc.o cram/pooled_alloc.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o cram/string_alloc.o cram/string_alloc.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/arith_dynamic.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/fqzcomp_qual.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/htscodecs.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/pack.o htscodecs/htscodecs/pack.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static4x16pr.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -mavx2 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx2.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -mavx512f -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_avx512.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -msse4.1 -mssse3 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_sse4.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr_neon.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static32x16pr.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rANS_static.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rle.o htscodecs/htscodecs/rle.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/tokenise_name3.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o htscodecs/htscodecs/utils.o htscodecs/htscodecs/utils.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o hfile_libcurl.o hfile_libcurl.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o hfile_gcs.o hfile_gcs.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o hfile_s3.o hfile_s3.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o hfile_s3_write.o hfile_s3_write.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o test/fuzz/hts_open_fuzzer.o test/fuzz/hts_open_fuzzer.c Step #3 - "compile-afl-address-x86_64": /src/aflplusplus/afl-clang-fast -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fvisibility=hidden -I. -c -o hts.o hts.c Step #3 - "compile-afl-address-x86_64": ar -rc libhts.a kfunc.o kstring.o bcf_sr_sort.o bgzf.o errmod.o faidx.o header.o hfile.o hts.o hts_expr.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o region.o sam.o sam_mods.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_stats.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/string_alloc.o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/pack.o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rle.o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/utils.o hfile_libcurl.o hfile_gcs.o hfile_s3.o hfile_s3_write.o Step #3 - "compile-afl-address-x86_64": ranlib libhts.a Step #3 - "compile-afl-address-x86_64": + /src/aflplusplus/afl-clang-fast++ -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -stdlib=libc++ -o /workspace/out/afl-address-x86_64/hts_open_fuzzer test/fuzz/hts_open_fuzzer.o /usr/lib/libFuzzingEngine.a libhts.a -lz -lbz2 -llzma -lcurl -lcrypto -lpthread Finished Step #3 - "compile-afl-address-x86_64" Starting Step #4 - "build-check-afl-address-x86_64" Step #4 - "build-check-afl-address-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #4 - "build-check-afl-address-x86_64": Unable to find image 'gcr.io/oss-fuzz-base/base-runner:latest' locally Step #4 - "build-check-afl-address-x86_64": latest: Pulling from oss-fuzz-base/base-runner Step #4 - "build-check-afl-address-x86_64": b549f31133a9: Already exists Step #4 - "build-check-afl-address-x86_64": 800687449569: Already exists Step #4 - "build-check-afl-address-x86_64": 67cc84ed39bf: Already exists Step #4 - "build-check-afl-address-x86_64": 4f9c5aaef41d: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": 70a3154e11f3: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": 4fab6a53b47e: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": 2c8974b97e3f: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": fa34d2d81dbe: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": 25703bb604aa: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": c73cf34df98f: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": 52a1fd76d509: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": 6887dca9f6f7: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": 9d450e2f2926: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": caeaffc0bf5a: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": 5bddf29a1eb5: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": 5123d679bab9: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": cd3fe814a4bf: Pulling fs layer Step #4 - "build-check-afl-address-x86_64": fa34d2d81dbe: Waiting Step #4 - "build-check-afl-address-x86_64": 2c8974b97e3f: Waiting Step #4 - "build-check-afl-address-x86_64": 25703bb604aa: Waiting Step #4 - "build-check-afl-address-x86_64": c73cf34df98f: Waiting Step #4 - "build-check-afl-address-x86_64": 52a1fd76d509: Waiting Step #4 - "build-check-afl-address-x86_64": 9d450e2f2926: Waiting Step #4 - "build-check-afl-address-x86_64": caeaffc0bf5a: Waiting Step #4 - "build-check-afl-address-x86_64": 5bddf29a1eb5: Waiting Step #4 - "build-check-afl-address-x86_64": 5123d679bab9: Waiting Step #4 - "build-check-afl-address-x86_64": cd3fe814a4bf: Waiting Step #4 - "build-check-afl-address-x86_64": 4fab6a53b47e: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": 4fab6a53b47e: Download complete Step #4 - "build-check-afl-address-x86_64": 4f9c5aaef41d: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": 4f9c5aaef41d: Download complete Step #4 - "build-check-afl-address-x86_64": 70a3154e11f3: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": 70a3154e11f3: Download complete Step #4 - "build-check-afl-address-x86_64": fa34d2d81dbe: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": fa34d2d81dbe: Download complete Step #4 - "build-check-afl-address-x86_64": 25703bb604aa: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": 25703bb604aa: Download complete Step #4 - "build-check-afl-address-x86_64": 4f9c5aaef41d: Pull complete Step #4 - "build-check-afl-address-x86_64": c73cf34df98f: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": c73cf34df98f: Download complete Step #4 - "build-check-afl-address-x86_64": 6887dca9f6f7: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": 6887dca9f6f7: Download complete Step #4 - "build-check-afl-address-x86_64": 52a1fd76d509: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": 52a1fd76d509: Download complete Step #4 - "build-check-afl-address-x86_64": 70a3154e11f3: Pull complete Step #4 - "build-check-afl-address-x86_64": caeaffc0bf5a: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": caeaffc0bf5a: Download complete Step #4 - "build-check-afl-address-x86_64": 4fab6a53b47e: Pull complete Step #4 - "build-check-afl-address-x86_64": 5bddf29a1eb5: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": 5bddf29a1eb5: Download complete Step #4 - "build-check-afl-address-x86_64": 2c8974b97e3f: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": 2c8974b97e3f: Download complete Step #4 - "build-check-afl-address-x86_64": cd3fe814a4bf: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": cd3fe814a4bf: Download complete Step #4 - "build-check-afl-address-x86_64": 9d450e2f2926: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": 9d450e2f2926: Download complete Step #4 - "build-check-afl-address-x86_64": 5123d679bab9: Verifying Checksum Step #4 - "build-check-afl-address-x86_64": 5123d679bab9: Download complete Step #4 - "build-check-afl-address-x86_64": 2c8974b97e3f: Pull complete Step #4 - "build-check-afl-address-x86_64": fa34d2d81dbe: Pull complete Step #4 - "build-check-afl-address-x86_64": 25703bb604aa: Pull complete Step #4 - "build-check-afl-address-x86_64": c73cf34df98f: Pull complete Step #4 - "build-check-afl-address-x86_64": 52a1fd76d509: Pull complete Step #4 - "build-check-afl-address-x86_64": 6887dca9f6f7: Pull complete Step #4 - "build-check-afl-address-x86_64": 9d450e2f2926: Pull complete Step #4 - "build-check-afl-address-x86_64": caeaffc0bf5a: Pull complete Step #4 - "build-check-afl-address-x86_64": 5bddf29a1eb5: Pull complete Step #4 - "build-check-afl-address-x86_64": 5123d679bab9: Pull complete Step #4 - "build-check-afl-address-x86_64": cd3fe814a4bf: Pull complete Step #4 - "build-check-afl-address-x86_64": Digest: sha256:f6046c5172da95c6c285c79de830b29f4115d542fe22b864a5dbc1432da29528 Step #4 - "build-check-afl-address-x86_64": Status: Downloaded newer image for gcr.io/oss-fuzz-base/base-runner:latest Step #4 - "build-check-afl-address-x86_64": INFO: performing bad build checks for /tmp/not-out/tmp916phjzh/hts_open_fuzzer Finished Step #4 - "build-check-afl-address-x86_64" Starting Step #5 Step #5: Already have image (with digest): gcr.io/oss-fuzz-base/base-runner Finished Step #5 Starting Step #6 Step #6: Already have image: gcr.io/oss-fuzz/htslib Step #6: adding: SanitizerCoveragePCGUARD.so (deflated 70%) Step #6: adding: afl-analyze (deflated 54%) Step #6: adding: afl-as (deflated 63%) Step #6: adding: afl-c++ (deflated 55%) Step #6: adding: afl-cc (deflated 55%) Step #6: adding: afl-clang (deflated 55%) Step #6: adding: afl-clang++ (deflated 55%) Step #6: adding: afl-clang-fast (deflated 55%) Step #6: adding: afl-clang-fast++ (deflated 55%) Step #6: adding: afl-clang-lto (deflated 55%) Step #6: adding: afl-clang-lto++ (deflated 55%) Step #6: adding: afl-cmin (deflated 71%) Step #6: adding: afl-cmin.bash (deflated 65%) Step #6: adding: afl-compiler-rt-32.o (deflated 56%) Step #6: adding: afl-compiler-rt-64.o (deflated 67%) Step #6: adding: afl-compiler-rt.o (deflated 67%) Step #6: adding: afl-fuzz (deflated 55%) Step #6: adding: afl-g++ (deflated 55%) Step #6: adding: afl-gcc (deflated 55%) Step #6: adding: afl-gotcpu (deflated 63%) Step #6: adding: afl-ld-lto (deflated 63%) Step #6: adding: afl-llvm-dict2file.so (deflated 68%) Step #6: adding: afl-llvm-lto-instrumentlist.so (deflated 70%) Step #6: adding: afl-llvm-pass.so (deflated 68%) Step #6: adding: afl-lto (deflated 55%) Step #6: adding: afl-lto++ (deflated 55%) Step #6: adding: afl-persistent-config (deflated 60%) Step #6: adding: afl-plot (deflated 65%) Step #6: adding: afl-showmap (deflated 54%) Step #6: adding: afl-system-config (deflated 63%) Step #6: adding: afl-tmin (deflated 53%) Step #6: adding: afl-whatsup (deflated 69%) Step #6: adding: afl-wine-trace (deflated 70%) Step #6: adding: afl_options.txt (deflated 20%) Step #6: adding: cmplog-instructions-pass.so (deflated 69%) Step #6: adding: cmplog-routines-pass.so (deflated 69%) Step #6: adding: cmplog-switches-pass.so (deflated 69%) Step #6: adding: compare-transform-pass.so (deflated 69%) Step #6: adding: dynamic_list.txt (deflated 76%) Step #6: adding: hts_open_fuzzer (deflated 59%) Step #6: adding: libAFLDriver.a (deflated 63%) Step #6: adding: libAFLQemuDriver.a (deflated 64%) Step #6: adding: llvm-symbolizer (deflated 64%) Step #6: adding: split-compares-pass.so (deflated 68%) Step #6: adding: split-switches-pass.so (deflated 69%) Finished Step #6 Starting Step #7 Step #7: Pulling image: gcr.io/oss-fuzz-base/uploader Step #7: Using default tag: latest Step #7: latest: Pulling from oss-fuzz-base/uploader Step #7: c62795f78da9: Pulling fs layer Step #7: d4fceeeb758e: Pulling fs layer Step #7: 5c9125a401ae: Pulling fs layer Step #7: 0062f774e994: Pulling fs layer Step #7: 6b33fd031fac: Pulling fs layer Step #7: 7eb39101e508: Pulling fs layer Step #7: 89257482f398: Pulling fs layer Step #7: 7eb39101e508: Waiting Step #7: 6b33fd031fac: Waiting Step #7: 89257482f398: Waiting Step #7: 0062f774e994: Waiting Step #7: d4fceeeb758e: Download complete Step #7: 5c9125a401ae: Download complete Step #7: 6b33fd031fac: Verifying Checksum Step #7: 6b33fd031fac: Download complete Step #7: 0062f774e994: Verifying Checksum Step #7: 0062f774e994: Download complete Step #7: 89257482f398: Verifying Checksum Step #7: 89257482f398: Download complete Step #7: c62795f78da9: Verifying Checksum Step #7: c62795f78da9: Download complete Step #7: 7eb39101e508: Verifying Checksum Step #7: 7eb39101e508: Download complete Step #7: c62795f78da9: Pull complete Step #7: d4fceeeb758e: Pull complete Step #7: 5c9125a401ae: Pull complete Step #7: 0062f774e994: Pull complete Step #7: 6b33fd031fac: Pull complete Step #7: 7eb39101e508: Pull complete Step #7: 89257482f398: Pull complete Step #7: Digest: sha256:5717ba63d13b5515063e2a6ccad09fb5bf32a86c8e0798a363d81c2be522e411 Step #7: Status: Downloaded newer image for gcr.io/oss-fuzz-base/uploader:latest Step #7: gcr.io/oss-fuzz-base/uploader:latest Step #7: % Total % Received % Xferd Average Speed Time Time Time Current Step #7: Dload Upload Total Spent Left Speed Step #7: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 153 0 0 100 153 0 729 --:--:-- --:--:-- --:--:-- 732 Finished Step #7 Starting Step #8 Step #8: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #8: % Total % Received % Xferd Average Speed Time Time Time Current Step #8: Dload Upload Total Spent Left Speed Step #8: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 10.1M 0 0 100 10.1M 0 18.2M --:--:-- --:--:-- --:--:-- 18.3M Finished Step #8 Starting Step #9 Step #9: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #9: % Total % Received % Xferd Average Speed Time Time Time Current Step #9: Dload Upload Total Spent Left Speed Step #9: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 16 0 0 100 16 0 60 --:--:-- --:--:-- --:--:-- 60 Finished Step #9 Starting Step #10 Step #10: Already have image (with digest): gcr.io/cloud-builders/curl Step #10: % Total % Received % Xferd Average Speed Time Time Time Current Step #10: Dload Upload Total Spent Left Speed Step #10: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 31 0 0 100 31 0 151 --:--:-- --:--:-- --:--:-- 151 Finished Step #10 Starting Step #11 Step #11: Already have image: gcr.io/oss-fuzz/htslib Finished Step #11 Starting Step #12 - "compile-honggfuzz-address-x86_64" Step #12 - "compile-honggfuzz-address-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #12 - "compile-honggfuzz-address-x86_64": --------------------------------------------------------------- Step #12 - "compile-honggfuzz-address-x86_64": Skipping compilation; using precompiled honggfuzz Step #12 - "compile-honggfuzz-address-x86_64": done. Step #12 - "compile-honggfuzz-address-x86_64": --------------------------------------------------------------- Step #12 - "compile-honggfuzz-address-x86_64": CC=clang Step #12 - "compile-honggfuzz-address-x86_64": CXX=clang++ Step #12 - "compile-honggfuzz-address-x86_64": CFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp Step #12 - "compile-honggfuzz-address-x86_64": CXXFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -stdlib=libc++ Step #12 - "compile-honggfuzz-address-x86_64": RUSTFLAGS=--cfg fuzzing -Zsanitizer=address -Cdebuginfo=1 -Cforce-frame-pointers Step #12 - "compile-honggfuzz-address-x86_64": --------------------------------------------------------------- Step #12 - "compile-honggfuzz-address-x86_64": + autoconf Step #12 - "compile-honggfuzz-address-x86_64": + autoheader Step #12 - "compile-honggfuzz-address-x86_64": + ./configure Step #12 - "compile-honggfuzz-address-x86_64": checking for gcc... clang Step #12 - "compile-honggfuzz-address-x86_64": checking whether the C compiler works... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for C compiler default output file name... a.out Step #12 - "compile-honggfuzz-address-x86_64": checking for suffix of executables... Step #12 - "compile-honggfuzz-address-x86_64": checking whether we are cross compiling... no Step #12 - "compile-honggfuzz-address-x86_64": checking for suffix of object files... o Step #12 - "compile-honggfuzz-address-x86_64": checking whether we are using the GNU C compiler... yes Step #12 - "compile-honggfuzz-address-x86_64": checking whether clang accepts -g... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for clang option to accept ISO C89... none needed Step #12 - "compile-honggfuzz-address-x86_64": checking for ranlib... ranlib Step #12 - "compile-honggfuzz-address-x86_64": checking for grep that handles long lines and -e... /usr/bin/grep Step #12 - "compile-honggfuzz-address-x86_64": checking for C compiler warning flags... -Wall Step #12 - "compile-honggfuzz-address-x86_64": checking how to run the C preprocessor... clang -E Step #12 - "compile-honggfuzz-address-x86_64": checking for egrep... /usr/bin/grep -E Step #12 - "compile-honggfuzz-address-x86_64": checking for ANSI C header files... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for sys/types.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for sys/stat.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for stdlib.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for string.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for memory.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for strings.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for inttypes.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for stdint.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for unistd.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking whether _XOPEN_SOURCE is declared... no Step #12 - "compile-honggfuzz-address-x86_64": checking C compiler flags needed for sse4.1... -msse4.1 -mssse3 -mpopcnt Step #12 - "compile-honggfuzz-address-x86_64": checking C compiler flags needed for avx2... -mavx2 -mpopcnt Step #12 - "compile-honggfuzz-address-x86_64": checking C compiler flags needed for avx512f... -mavx512f -mpopcnt Step #12 - "compile-honggfuzz-address-x86_64": checking for pkg-config... no Step #12 - "compile-honggfuzz-address-x86_64": checking for special C compiler options needed for large files... no Step #12 - "compile-honggfuzz-address-x86_64": checking for _FILE_OFFSET_BITS value needed for large files... no Step #12 - "compile-honggfuzz-address-x86_64": checking shared library type for unknown-Linux... plain .so Step #12 - "compile-honggfuzz-address-x86_64": checking whether the linker supports versioned symbols... yes Step #12 - "compile-honggfuzz-address-x86_64": checking whether the compiler accepts -fvisibility=hidden... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for stdlib.h... (cached) yes Step #12 - "compile-honggfuzz-address-x86_64": checking for unistd.h... (cached) yes Step #12 - "compile-honggfuzz-address-x86_64": checking for sys/param.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for getpagesize... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for working mmap... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for gmtime_r... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for fsync... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for drand48... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for srand48_deterministic... no Step #12 - "compile-honggfuzz-address-x86_64": checking whether fdatasync is declared... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for fdatasync... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for library containing log... none required Step #12 - "compile-honggfuzz-address-x86_64": checking for zlib.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for inflate in -lz... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for library containing recv... none required Step #12 - "compile-honggfuzz-address-x86_64": checking for bzlib.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for BZ2_bzBuffToBuffCompress in -lbz2... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for lzma.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for lzma_easy_buffer_encode in -llzma... yes Step #12 - "compile-honggfuzz-address-x86_64": checking whether htscodecs files are present... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for libdeflate.h... no Step #12 - "compile-honggfuzz-address-x86_64": checking for libdeflate_deflate_compress in -ldeflate... no Step #12 - "compile-honggfuzz-address-x86_64": checking for curl/curl.h... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for curl_easy_pause in -lcurl... yes Step #12 - "compile-honggfuzz-address-x86_64": checking for CCHmac... no Step #12 - "compile-honggfuzz-address-x86_64": checking for library containing HMAC... -lcrypto Step #12 - "compile-honggfuzz-address-x86_64": checking for library containing regcomp... none required Step #12 - "compile-honggfuzz-address-x86_64": configure: creating ./config.status Step #12 - "compile-honggfuzz-address-x86_64": config.status: creating config.mk Step #12 - "compile-honggfuzz-address-x86_64": config.status: creating htslib.pc.tmp Step #12 - "compile-honggfuzz-address-x86_64": config.status: creating config.h Step #12 - "compile-honggfuzz-address-x86_64": config.status: linking htscodecs_bundled.mk to htscodecs.mk Step #12 - "compile-honggfuzz-address-x86_64": ++ nproc Step #12 - "compile-honggfuzz-address-x86_64": + make -j32 libhts.a test/fuzz/hts_open_fuzzer.o Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o kfunc.o kfunc.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o kstring.o kstring.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o bcf_sr_sort.o bcf_sr_sort.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o bgzf.o bgzf.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o errmod.o errmod.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o faidx.o faidx.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o header.o header.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o hfile.o hfile.c Step #12 - "compile-honggfuzz-address-x86_64": echo '#define HTS_VERSION_TEXT "1.18-1-gd1aae52"' > version.h Step #12 - "compile-honggfuzz-address-x86_64": printf '#define HTS_CC "%s"\n#define HTS_CPPFLAGS "%s"\n#define HTS_CFLAGS "%s"\n#define HTS_LDFLAGS "%s"\n#define HTS_LIBS "%s"\n' \ Step #12 - "compile-honggfuzz-address-x86_64": 'clang' \ Step #12 - "compile-honggfuzz-address-x86_64": '' \ Step #12 - "compile-honggfuzz-address-x86_64": '-Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden' \ Step #12 - "compile-honggfuzz-address-x86_64": '-fvisibility=hidden ' \ Step #12 - "compile-honggfuzz-address-x86_64": '-llzma -lbz2 -lz -lcurl -lcrypto' > config_vars.h Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o hts_expr.o hts_expr.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o hts_os.o hts_os.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o md5.o md5.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o multipart.o multipart.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o probaln.o probaln.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o realn.o realn.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o regidx.o regidx.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o region.o region.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o sam.o sam.c Step #12 - "compile-honggfuzz-address-x86_64": awk: line 1: clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o sam_mods.o sam_mods.c Step #12 - "compile-honggfuzz-address-x86_64": syntax error at or near , Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o synced_bcf_reader.o synced_bcf_reader.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o vcf_sweep.o vcf_sweep.c Step #12 - "compile-honggfuzz-address-x86_64": Updating htscodecs/htscodecs/version.h : #define HTSCODECS_VERSION_TEXT "-g2aca18b" Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o tbx.o tbx.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o textutils.o textutils.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o thread_pool.o thread_pool.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o vcf.o vcf.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o vcfutils.o vcfutils.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/cram_codecs.o cram/cram_codecs.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/cram_decode.o cram/cram_decode.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/cram_encode.o cram/cram_encode.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/cram_external.o cram/cram_external.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/cram_index.o cram/cram_index.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/cram_io.o cram/cram_io.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/cram_stats.o cram/cram_stats.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/mFILE.o cram/mFILE.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/open_trace_file.o cram/open_trace_file.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/pooled_alloc.o cram/pooled_alloc.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o cram/string_alloc.o cram/string_alloc.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/arith_dynamic.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/fqzcomp_qual.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/htscodecs.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/pack.o htscodecs/htscodecs/pack.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static4x16pr.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -mavx2 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx2.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -mavx512f -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_avx512.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -msse4.1 -mssse3 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_sse4.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr_neon.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static32x16pr.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rANS_static.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rle.o htscodecs/htscodecs/rle.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/tokenise_name3.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o htscodecs/htscodecs/utils.o htscodecs/htscodecs/utils.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o hfile_libcurl.o hfile_libcurl.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o hfile_gcs.o hfile_gcs.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o hfile_s3.o hfile_s3.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o hfile_s3_write.o hfile_s3_write.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o test/fuzz/hts_open_fuzzer.o test/fuzz/hts_open_fuzzer.c Step #12 - "compile-honggfuzz-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -fvisibility=hidden -I. -c -o hts.o hts.c Step #12 - "compile-honggfuzz-address-x86_64": ar -rc libhts.a kfunc.o kstring.o bcf_sr_sort.o bgzf.o errmod.o faidx.o header.o hfile.o hts.o hts_expr.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o region.o sam.o sam_mods.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_stats.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/string_alloc.o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/pack.o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rle.o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/utils.o hfile_libcurl.o hfile_gcs.o hfile_s3.o hfile_s3_write.o Step #12 - "compile-honggfuzz-address-x86_64": ranlib libhts.a Step #12 - "compile-honggfuzz-address-x86_64": + clang++ -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize-coverage=trace-pc-guard,indirect-calls,trace-cmp -stdlib=libc++ -o /workspace/out/honggfuzz-address-x86_64/hts_open_fuzzer test/fuzz/hts_open_fuzzer.o /usr/lib/libFuzzingEngine.a libhts.a -lz -lbz2 -llzma -lcurl -lcrypto -lpthread Finished Step #12 - "compile-honggfuzz-address-x86_64" Starting Step #13 - "build-check-honggfuzz-address-x86_64" Step #13 - "build-check-honggfuzz-address-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #13 - "build-check-honggfuzz-address-x86_64": INFO: performing bad build checks for /tmp/not-out/tmpwkgempgm/hts_open_fuzzer Finished Step #13 - "build-check-honggfuzz-address-x86_64" Starting Step #14 Step #14: Already have image (with digest): gcr.io/oss-fuzz-base/base-runner Finished Step #14 Starting Step #15 Step #15: Already have image: gcr.io/oss-fuzz/htslib Step #15: adding: honggfuzz (deflated 66%) Step #15: adding: hts_open_fuzzer (deflated 60%) Step #15: adding: llvm-symbolizer (deflated 64%) Finished Step #15 Starting Step #16 Step #16: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #16: % Total % Received % Xferd Average Speed Time Time Time Current Step #16: Dload Upload Total Spent Left Speed Step #16: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 153 0 0 100 153 0 206 --:--:-- --:--:-- --:--:-- 206 100 153 0 0 100 153 0 206 --:--:-- --:--:-- --:--:-- 206 Finished Step #16 Starting Step #17 Step #17: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #17: % Total % Received % Xferd Average Speed Time Time Time Current Step #17: Dload Upload Total Spent Left Speed Step #17: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 5291k 0 0 100 5291k 0 16.8M --:--:-- --:--:-- --:--:-- 16.8M Finished Step #17 Starting Step #18 Step #18: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #18: % Total % Received % Xferd Average Speed Time Time Time Current Step #18: Dload Upload Total Spent Left Speed Step #18: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 16 0 0 100 16 0 45 --:--:-- --:--:-- --:--:-- 45 Finished Step #18 Starting Step #19 Step #19: Already have image (with digest): gcr.io/cloud-builders/curl Step #19: % Total % Received % Xferd Average Speed Time Time Time Current Step #19: Dload Upload Total Spent Left Speed Step #19: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 31 0 0 100 31 0 150 --:--:-- --:--:-- --:--:-- 150 Finished Step #19 Starting Step #20 Step #20: Already have image: gcr.io/oss-fuzz/htslib Finished Step #20 Starting Step #21 - "compile-libfuzzer-address-x86_64" Step #21 - "compile-libfuzzer-address-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #21 - "compile-libfuzzer-address-x86_64": --------------------------------------------------------------- Step #21 - "compile-libfuzzer-address-x86_64": Compiling libFuzzer to /usr/lib/libFuzzingEngine.a... done. Step #21 - "compile-libfuzzer-address-x86_64": --------------------------------------------------------------- Step #21 - "compile-libfuzzer-address-x86_64": CC=clang Step #21 - "compile-libfuzzer-address-x86_64": CXX=clang++ Step #21 - "compile-libfuzzer-address-x86_64": CFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link Step #21 - "compile-libfuzzer-address-x86_64": CXXFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -stdlib=libc++ Step #21 - "compile-libfuzzer-address-x86_64": RUSTFLAGS=--cfg fuzzing -Zsanitizer=address -Cdebuginfo=1 -Cforce-frame-pointers Step #21 - "compile-libfuzzer-address-x86_64": --------------------------------------------------------------- Step #21 - "compile-libfuzzer-address-x86_64": + autoconf Step #21 - "compile-libfuzzer-address-x86_64": + autoheader Step #21 - "compile-libfuzzer-address-x86_64": + ./configure Step #21 - "compile-libfuzzer-address-x86_64": checking for gcc... clang Step #21 - "compile-libfuzzer-address-x86_64": checking whether the C compiler works... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for C compiler default output file name... a.out Step #21 - "compile-libfuzzer-address-x86_64": checking for suffix of executables... Step #21 - "compile-libfuzzer-address-x86_64": checking whether we are cross compiling... no Step #21 - "compile-libfuzzer-address-x86_64": checking for suffix of object files... o Step #21 - "compile-libfuzzer-address-x86_64": checking whether we are using the GNU C compiler... yes Step #21 - "compile-libfuzzer-address-x86_64": checking whether clang accepts -g... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for clang option to accept ISO C89... none needed Step #21 - "compile-libfuzzer-address-x86_64": checking for ranlib... ranlib Step #21 - "compile-libfuzzer-address-x86_64": checking for grep that handles long lines and -e... /usr/bin/grep Step #21 - "compile-libfuzzer-address-x86_64": checking for C compiler warning flags... -Wall Step #21 - "compile-libfuzzer-address-x86_64": checking how to run the C preprocessor... clang -E Step #21 - "compile-libfuzzer-address-x86_64": checking for egrep... /usr/bin/grep -E Step #21 - "compile-libfuzzer-address-x86_64": checking for ANSI C header files... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for sys/types.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for sys/stat.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for stdlib.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for string.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for memory.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for strings.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for inttypes.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for stdint.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for unistd.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking whether _XOPEN_SOURCE is declared... no Step #21 - "compile-libfuzzer-address-x86_64": checking C compiler flags needed for sse4.1... -msse4.1 -mssse3 -mpopcnt Step #21 - "compile-libfuzzer-address-x86_64": checking C compiler flags needed for avx2... -mavx2 -mpopcnt Step #21 - "compile-libfuzzer-address-x86_64": checking C compiler flags needed for avx512f... -mavx512f -mpopcnt Step #21 - "compile-libfuzzer-address-x86_64": checking for pkg-config... no Step #21 - "compile-libfuzzer-address-x86_64": checking for special C compiler options needed for large files... no Step #21 - "compile-libfuzzer-address-x86_64": checking for _FILE_OFFSET_BITS value needed for large files... no Step #21 - "compile-libfuzzer-address-x86_64": checking shared library type for unknown-Linux... plain .so Step #21 - "compile-libfuzzer-address-x86_64": checking whether the linker supports versioned symbols... yes Step #21 - "compile-libfuzzer-address-x86_64": checking whether the compiler accepts -fvisibility=hidden... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for stdlib.h... (cached) yes Step #21 - "compile-libfuzzer-address-x86_64": checking for unistd.h... (cached) yes Step #21 - "compile-libfuzzer-address-x86_64": checking for sys/param.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for getpagesize... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for working mmap... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for gmtime_r... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for fsync... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for drand48... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for srand48_deterministic... no Step #21 - "compile-libfuzzer-address-x86_64": checking whether fdatasync is declared... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for fdatasync... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for library containing log... none required Step #21 - "compile-libfuzzer-address-x86_64": checking for zlib.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for inflate in -lz... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for library containing recv... none required Step #21 - "compile-libfuzzer-address-x86_64": checking for bzlib.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for BZ2_bzBuffToBuffCompress in -lbz2... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for lzma.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for lzma_easy_buffer_encode in -llzma... yes Step #21 - "compile-libfuzzer-address-x86_64": checking whether htscodecs files are present... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for libdeflate.h... no Step #21 - "compile-libfuzzer-address-x86_64": checking for libdeflate_deflate_compress in -ldeflate... no Step #21 - "compile-libfuzzer-address-x86_64": checking for curl/curl.h... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for curl_easy_pause in -lcurl... yes Step #21 - "compile-libfuzzer-address-x86_64": checking for CCHmac... no Step #21 - "compile-libfuzzer-address-x86_64": checking for library containing HMAC... -lcrypto Step #21 - "compile-libfuzzer-address-x86_64": checking for library containing regcomp... none required Step #21 - "compile-libfuzzer-address-x86_64": configure: creating ./config.status Step #21 - "compile-libfuzzer-address-x86_64": config.status: creating config.mk Step #21 - "compile-libfuzzer-address-x86_64": config.status: creating htslib.pc.tmp Step #21 - "compile-libfuzzer-address-x86_64": config.status: creating config.h Step #21 - "compile-libfuzzer-address-x86_64": config.status: linking htscodecs_bundled.mk to htscodecs.mk Step #21 - "compile-libfuzzer-address-x86_64": ++ nproc Step #21 - "compile-libfuzzer-address-x86_64": + make -j32 libhts.a test/fuzz/hts_open_fuzzer.o Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o kfunc.o kfunc.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o kstring.o kstring.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o bcf_sr_sort.o bcf_sr_sort.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o bgzf.o bgzf.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o errmod.o errmod.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o faidx.o faidx.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o header.o header.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile.o hfile.c Step #21 - "compile-libfuzzer-address-x86_64": echo '#define HTS_VERSION_TEXT "1.18-1-gd1aae52"' > version.h Step #21 - "compile-libfuzzer-address-x86_64": printf '#define HTS_CC "%s"\n#define HTS_CPPFLAGS "%s"\n#define HTS_CFLAGS "%s"\n#define HTS_LDFLAGS "%s"\n#define HTS_LIBS "%s"\n' \ Step #21 - "compile-libfuzzer-address-x86_64": 'clang' \ Step #21 - "compile-libfuzzer-address-x86_64": '' \ Step #21 - "compile-libfuzzer-address-x86_64": '-Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden' \ Step #21 - "compile-libfuzzer-address-x86_64": '-fvisibility=hidden ' \ Step #21 - "compile-libfuzzer-address-x86_64": '-llzma -lbz2 -lz -lcurl -lcrypto' > config_vars.h Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hts_expr.o hts_expr.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hts_os.o hts_os.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o md5.o md5.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o multipart.o multipart.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o probaln.o probaln.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o realn.o realn.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o regidx.o regidx.c Step #21 - "compile-libfuzzer-address-x86_64": awk: line 1: syntax error at or near , Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o region.o region.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o sam.o sam.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o sam_mods.o sam_mods.c Step #21 - "compile-libfuzzer-address-x86_64": Updating htscodecs/htscodecs/version.h : #define HTSCODECS_VERSION_TEXT "-g2aca18b" Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o synced_bcf_reader.o synced_bcf_reader.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o vcf_sweep.o vcf_sweep.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o tbx.o tbx.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o textutils.o textutils.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o thread_pool.o thread_pool.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o vcf.o vcf.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o vcfutils.o vcfutils.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_codecs.o cram/cram_codecs.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_decode.o cram/cram_decode.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_encode.o cram/cram_encode.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_external.o cram/cram_external.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_index.o cram/cram_index.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_io.o cram/cram_io.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_stats.o cram/cram_stats.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/mFILE.o cram/mFILE.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/open_trace_file.o cram/open_trace_file.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/pooled_alloc.o cram/pooled_alloc.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/string_alloc.o cram/string_alloc.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/arith_dynamic.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/fqzcomp_qual.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/htscodecs.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/pack.o htscodecs/htscodecs/pack.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static4x16pr.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -mavx2 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx2.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -mavx512f -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_avx512.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -msse4.1 -mssse3 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_sse4.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr_neon.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static32x16pr.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rANS_static.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rle.o htscodecs/htscodecs/rle.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/tokenise_name3.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/utils.o htscodecs/htscodecs/utils.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_libcurl.o hfile_libcurl.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_gcs.o hfile_gcs.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_s3.o hfile_s3.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_s3_write.o hfile_s3_write.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o test/fuzz/hts_open_fuzzer.o test/fuzz/hts_open_fuzzer.c Step #21 - "compile-libfuzzer-address-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hts.o hts.c Step #21 - "compile-libfuzzer-address-x86_64": ar -rc libhts.a kfunc.o kstring.o bcf_sr_sort.o bgzf.o errmod.o faidx.o header.o hfile.o hts.o hts_expr.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o region.o sam.o sam_mods.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_stats.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/string_alloc.o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/pack.o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rle.o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/utils.o hfile_libcurl.o hfile_gcs.o hfile_s3.o hfile_s3_write.o Step #21 - "compile-libfuzzer-address-x86_64": ranlib libhts.a Step #21 - "compile-libfuzzer-address-x86_64": + clang++ -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=address -fsanitize-address-use-after-scope -fsanitize=fuzzer-no-link -stdlib=libc++ -o /workspace/out/libfuzzer-address-x86_64/hts_open_fuzzer test/fuzz/hts_open_fuzzer.o -fsanitize=fuzzer libhts.a -lz -lbz2 -llzma -lcurl -lcrypto -lpthread Finished Step #21 - "compile-libfuzzer-address-x86_64" Starting Step #22 - "build-check-libfuzzer-address-x86_64" Step #22 - "build-check-libfuzzer-address-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #22 - "build-check-libfuzzer-address-x86_64": INFO: performing bad build checks for /tmp/not-out/tmpg83c7ojw/hts_open_fuzzer Finished Step #22 - "build-check-libfuzzer-address-x86_64" Starting Step #23 Step #23: Already have image (with digest): gcr.io/oss-fuzz-base/base-runner Finished Step #23 Starting Step #24 Step #24: Already have image: gcr.io/oss-fuzz/htslib Step #24: adding: hts_open_fuzzer (deflated 62%) Step #24: adding: llvm-symbolizer (deflated 64%) Finished Step #24 Starting Step #25 Step #25: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #25: % Total % Received % Xferd Average Speed Time Time Time Current Step #25: Dload Upload Total Spent Left Speed Step #25: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 153 0 0 100 153 0 702 --:--:-- --:--:-- --:--:-- 705 Finished Step #25 Starting Step #26 Step #26: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #26: % Total % Received % Xferd Average Speed Time Time Time Current Step #26: Dload Upload Total Spent Left Speed Step #26: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 5627k 0 0 100 5627k 0 13.3M --:--:-- --:--:-- --:--:-- 13.3M Finished Step #26 Starting Step #27 Step #27: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #27: % Total % Received % Xferd Average Speed Time Time Time Current Step #27: Dload Upload Total Spent Left Speed Step #27: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 16 0 0 100 16 0 78 --:--:-- --:--:-- --:--:-- 78 100 16 0 0 100 16 0 55 --:--:-- --:--:-- --:--:-- 55 Finished Step #27 Starting Step #28 Step #28: Already have image (with digest): gcr.io/cloud-builders/curl Step #28: % Total % Received % Xferd Average Speed Time Time Time Current Step #28: Dload Upload Total Spent Left Speed Step #28: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 31 0 0 100 31 0 158 --:--:-- --:--:-- --:--:-- 158 Finished Step #28 Starting Step #29 Step #29: Already have image: gcr.io/oss-fuzz/htslib Finished Step #29 Starting Step #30 - "compile-libfuzzer-none-x86_64" Step #30 - "compile-libfuzzer-none-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #30 - "compile-libfuzzer-none-x86_64": --------------------------------------------------------------- Step #30 - "compile-libfuzzer-none-x86_64": Compiling libFuzzer to /usr/lib/libFuzzingEngine.a... done. Step #30 - "compile-libfuzzer-none-x86_64": --------------------------------------------------------------- Step #30 - "compile-libfuzzer-none-x86_64": CC=clang Step #30 - "compile-libfuzzer-none-x86_64": CXX=clang++ Step #30 - "compile-libfuzzer-none-x86_64": CFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link Step #30 - "compile-libfuzzer-none-x86_64": CXXFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -stdlib=libc++ Step #30 - "compile-libfuzzer-none-x86_64": RUSTFLAGS=--cfg fuzzing -Cdebuginfo=1 -Cforce-frame-pointers Step #30 - "compile-libfuzzer-none-x86_64": --------------------------------------------------------------- Step #30 - "compile-libfuzzer-none-x86_64": + autoconf Step #30 - "compile-libfuzzer-none-x86_64": + autoheader Step #30 - "compile-libfuzzer-none-x86_64": + ./configure Step #30 - "compile-libfuzzer-none-x86_64": checking for gcc... clang Step #30 - "compile-libfuzzer-none-x86_64": checking whether the C compiler works... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for C compiler default output file name... a.out Step #30 - "compile-libfuzzer-none-x86_64": checking for suffix of executables... Step #30 - "compile-libfuzzer-none-x86_64": checking whether we are cross compiling... no Step #30 - "compile-libfuzzer-none-x86_64": checking for suffix of object files... o Step #30 - "compile-libfuzzer-none-x86_64": checking whether we are using the GNU C compiler... yes Step #30 - "compile-libfuzzer-none-x86_64": checking whether clang accepts -g... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for clang option to accept ISO C89... none needed Step #30 - "compile-libfuzzer-none-x86_64": checking for ranlib... ranlib Step #30 - "compile-libfuzzer-none-x86_64": checking for grep that handles long lines and -e... /usr/bin/grep Step #30 - "compile-libfuzzer-none-x86_64": checking for C compiler warning flags... -Wall Step #30 - "compile-libfuzzer-none-x86_64": checking how to run the C preprocessor... clang -E Step #30 - "compile-libfuzzer-none-x86_64": checking for egrep... /usr/bin/grep -E Step #30 - "compile-libfuzzer-none-x86_64": checking for ANSI C header files... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for sys/types.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for sys/stat.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for stdlib.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for string.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for memory.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for strings.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for inttypes.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for stdint.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for unistd.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking whether _XOPEN_SOURCE is declared... no Step #30 - "compile-libfuzzer-none-x86_64": checking C compiler flags needed for sse4.1... -msse4.1 -mssse3 -mpopcnt Step #30 - "compile-libfuzzer-none-x86_64": checking C compiler flags needed for avx2... -mavx2 -mpopcnt Step #30 - "compile-libfuzzer-none-x86_64": checking C compiler flags needed for avx512f... -mavx512f -mpopcnt Step #30 - "compile-libfuzzer-none-x86_64": checking for pkg-config... no Step #30 - "compile-libfuzzer-none-x86_64": checking for special C compiler options needed for large files... no Step #30 - "compile-libfuzzer-none-x86_64": checking for _FILE_OFFSET_BITS value needed for large files... no Step #30 - "compile-libfuzzer-none-x86_64": checking shared library type for unknown-Linux... plain .so Step #30 - "compile-libfuzzer-none-x86_64": checking whether the linker supports versioned symbols... yes Step #30 - "compile-libfuzzer-none-x86_64": checking whether the compiler accepts -fvisibility=hidden... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for stdlib.h... (cached) yes Step #30 - "compile-libfuzzer-none-x86_64": checking for unistd.h... (cached) yes Step #30 - "compile-libfuzzer-none-x86_64": checking for sys/param.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for getpagesize... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for working mmap... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for gmtime_r... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for fsync... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for drand48... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for srand48_deterministic... no Step #30 - "compile-libfuzzer-none-x86_64": checking whether fdatasync is declared... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for fdatasync... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for library containing log... none required Step #30 - "compile-libfuzzer-none-x86_64": checking for zlib.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for inflate in -lz... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for library containing recv... none required Step #30 - "compile-libfuzzer-none-x86_64": checking for bzlib.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for BZ2_bzBuffToBuffCompress in -lbz2... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for lzma.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for lzma_easy_buffer_encode in -llzma... yes Step #30 - "compile-libfuzzer-none-x86_64": checking whether htscodecs files are present... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for libdeflate.h... no Step #30 - "compile-libfuzzer-none-x86_64": checking for libdeflate_deflate_compress in -ldeflate... no Step #30 - "compile-libfuzzer-none-x86_64": checking for curl/curl.h... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for curl_easy_pause in -lcurl... yes Step #30 - "compile-libfuzzer-none-x86_64": checking for CCHmac... no Step #30 - "compile-libfuzzer-none-x86_64": checking for library containing HMAC... -lcrypto Step #30 - "compile-libfuzzer-none-x86_64": checking for library containing regcomp... none required Step #30 - "compile-libfuzzer-none-x86_64": configure: creating ./config.status Step #30 - "compile-libfuzzer-none-x86_64": config.status: creating config.mk Step #30 - "compile-libfuzzer-none-x86_64": config.status: creating htslib.pc.tmp Step #30 - "compile-libfuzzer-none-x86_64": config.status: creating config.h Step #30 - "compile-libfuzzer-none-x86_64": config.status: linking htscodecs_bundled.mk to htscodecs.mk Step #30 - "compile-libfuzzer-none-x86_64": ++ nproc Step #30 - "compile-libfuzzer-none-x86_64": + make -j32 libhts.a test/fuzz/hts_open_fuzzer.o Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o kfunc.o kfunc.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o kstring.o kstring.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o bcf_sr_sort.o bcf_sr_sort.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o bgzf.o bgzf.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o errmod.o errmod.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o faidx.o faidx.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o header.o header.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile.o hfile.c Step #30 - "compile-libfuzzer-none-x86_64": echo '#define HTS_VERSION_TEXT "1.18-1-gd1aae52"' > version.h Step #30 - "compile-libfuzzer-none-x86_64": printf '#define HTS_CC "%s"\n#define HTS_CPPFLAGS "%s"\n#define HTS_CFLAGS "%s"\n#define HTS_LDFLAGS "%s"\n#define HTS_LIBS "%s"\n' \ Step #30 - "compile-libfuzzer-none-x86_64": 'clang' \ Step #30 - "compile-libfuzzer-none-x86_64": '' \ Step #30 - "compile-libfuzzer-none-x86_64": '-Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden' \ Step #30 - "compile-libfuzzer-none-x86_64": '-fvisibility=hidden ' \ Step #30 - "compile-libfuzzer-none-x86_64": '-llzma -lbz2 -lz -lcurl -lcrypto' > config_vars.h Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hts_expr.o hts_expr.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hts_os.o hts_os.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o md5.o md5.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o multipart.o multipart.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o probaln.o probaln.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o realn.o realn.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o regidx.o regidx.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o region.o region.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o sam.o sam.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o sam_mods.o sam_mods.c Step #30 - "compile-libfuzzer-none-x86_64": awk: line 1: syntax error at or near , Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o synced_bcf_reader.o synced_bcf_reader.c Step #30 - "compile-libfuzzer-none-x86_64": Updating htscodecs/htscodecs/version.h : #define HTSCODECS_VERSION_TEXT "-g2aca18b" Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o vcf_sweep.o vcf_sweep.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o tbx.o tbx.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o textutils.o textutils.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o thread_pool.o thread_pool.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o vcf.o vcf.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o vcfutils.o vcfutils.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_codecs.o cram/cram_codecs.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_decode.o cram/cram_decode.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_encode.o cram/cram_encode.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_external.o cram/cram_external.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_index.o cram/cram_index.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_io.o cram/cram_io.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_stats.o cram/cram_stats.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/mFILE.o cram/mFILE.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/open_trace_file.o cram/open_trace_file.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/pooled_alloc.o cram/pooled_alloc.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/string_alloc.o cram/string_alloc.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/arith_dynamic.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/fqzcomp_qual.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/htscodecs.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/pack.o htscodecs/htscodecs/pack.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static4x16pr.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -mavx2 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx2.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -mavx512f -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_avx512.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -msse4.1 -mssse3 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_sse4.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr_neon.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static32x16pr.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rANS_static.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rle.o htscodecs/htscodecs/rle.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/tokenise_name3.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/utils.o htscodecs/htscodecs/utils.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_libcurl.o hfile_libcurl.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_gcs.o hfile_gcs.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_s3.o hfile_s3.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_s3_write.o hfile_s3_write.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o test/fuzz/hts_open_fuzzer.o test/fuzz/hts_open_fuzzer.c Step #30 - "compile-libfuzzer-none-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hts.o hts.c Step #30 - "compile-libfuzzer-none-x86_64": ar -rc libhts.a kfunc.o kstring.o bcf_sr_sort.o bgzf.o errmod.o faidx.o header.o hfile.o hts.o hts_expr.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o region.o sam.o sam_mods.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_stats.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/string_alloc.o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/pack.o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rle.o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/utils.o hfile_libcurl.o hfile_gcs.o hfile_s3.o hfile_s3_write.o Step #30 - "compile-libfuzzer-none-x86_64": ranlib libhts.a Step #30 - "compile-libfuzzer-none-x86_64": + clang++ -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=fuzzer-no-link -stdlib=libc++ -o /workspace/out/libfuzzer-none-x86_64/hts_open_fuzzer test/fuzz/hts_open_fuzzer.o -fsanitize=fuzzer libhts.a -lz -lbz2 -llzma -lcurl -lcrypto -lpthread Finished Step #30 - "compile-libfuzzer-none-x86_64" Starting Step #31 - "build-check-libfuzzer-none-x86_64" Step #31 - "build-check-libfuzzer-none-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #31 - "build-check-libfuzzer-none-x86_64": INFO: performing bad build checks for /tmp/not-out/tmp0qg7w_ki/hts_open_fuzzer Finished Step #31 - "build-check-libfuzzer-none-x86_64" Starting Step #32 Step #32: Already have image (with digest): gcr.io/oss-fuzz-base/base-runner Finished Step #32 Starting Step #33 Step #33: Already have image: gcr.io/oss-fuzz/htslib Step #33: adding: hts_open_fuzzer (deflated 61%) Step #33: adding: llvm-symbolizer (deflated 64%) Finished Step #33 Starting Step #34 Step #34: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #34: % Total % Received % Xferd Average Speed Time Time Time Current Step #34: Dload Upload Total Spent Left Speed Step #34: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 153 0 0 100 153 0 713 --:--:-- --:--:-- --:--:-- 714 Finished Step #34 Starting Step #35 Step #35: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #35: % Total % Received % Xferd Average Speed Time Time Time Current Step #35: Dload Upload Total Spent Left Speed Step #35: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 4199k 0 0 100 4199k 0 19.9M --:--:-- --:--:-- --:--:-- 19.9M 100 4199k 0 0 100 4199k 0 16.2M --:--:-- --:--:-- --:--:-- 16.2M Finished Step #35 Starting Step #36 Step #36: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #36: % Total % Received % Xferd Average Speed Time Time Time Current Step #36: Dload Upload Total Spent Left Speed Step #36: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 16 0 0 100 16 0 61 --:--:-- --:--:-- --:--:-- 61 Finished Step #36 Starting Step #37 Step #37: Already have image (with digest): gcr.io/cloud-builders/curl Step #37: % Total % Received % Xferd Average Speed Time Time Time Current Step #37: Dload Upload Total Spent Left Speed Step #37: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 28 0 0 100 28 0 151 --:--:-- --:--:-- --:--:-- 151 Finished Step #37 Starting Step #38 Step #38: Already have image: gcr.io/oss-fuzz/htslib Finished Step #38 Starting Step #39 - "compile-libfuzzer-undefined-x86_64" Step #39 - "compile-libfuzzer-undefined-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #39 - "compile-libfuzzer-undefined-x86_64": --------------------------------------------------------------- Step #39 - "compile-libfuzzer-undefined-x86_64": Compiling libFuzzer to /usr/lib/libFuzzingEngine.a... done. Step #39 - "compile-libfuzzer-undefined-x86_64": --------------------------------------------------------------- Step #39 - "compile-libfuzzer-undefined-x86_64": CC=clang Step #39 - "compile-libfuzzer-undefined-x86_64": CXX=clang++ Step #39 - "compile-libfuzzer-undefined-x86_64": CFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link Step #39 - "compile-libfuzzer-undefined-x86_64": CXXFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -stdlib=libc++ Step #39 - "compile-libfuzzer-undefined-x86_64": RUSTFLAGS=--cfg fuzzing -Cdebuginfo=1 -Cforce-frame-pointers Step #39 - "compile-libfuzzer-undefined-x86_64": --------------------------------------------------------------- Step #39 - "compile-libfuzzer-undefined-x86_64": + autoconf Step #39 - "compile-libfuzzer-undefined-x86_64": + autoheader Step #39 - "compile-libfuzzer-undefined-x86_64": + ./configure Step #39 - "compile-libfuzzer-undefined-x86_64": checking for gcc... clang Step #39 - "compile-libfuzzer-undefined-x86_64": checking whether the C compiler works... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for C compiler default output file name... a.out Step #39 - "compile-libfuzzer-undefined-x86_64": checking for suffix of executables... Step #39 - "compile-libfuzzer-undefined-x86_64": checking whether we are cross compiling... no Step #39 - "compile-libfuzzer-undefined-x86_64": checking for suffix of object files... o Step #39 - "compile-libfuzzer-undefined-x86_64": checking whether we are using the GNU C compiler... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking whether clang accepts -g... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for clang option to accept ISO C89... none needed Step #39 - "compile-libfuzzer-undefined-x86_64": checking for ranlib... ranlib Step #39 - "compile-libfuzzer-undefined-x86_64": checking for grep that handles long lines and -e... /usr/bin/grep Step #39 - "compile-libfuzzer-undefined-x86_64": checking for C compiler warning flags... -Wall Step #39 - "compile-libfuzzer-undefined-x86_64": checking how to run the C preprocessor... clang -E Step #39 - "compile-libfuzzer-undefined-x86_64": checking for egrep... /usr/bin/grep -E Step #39 - "compile-libfuzzer-undefined-x86_64": checking for ANSI C header files... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for sys/types.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for sys/stat.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for stdlib.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for string.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for memory.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for strings.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for inttypes.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for stdint.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for unistd.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking whether _XOPEN_SOURCE is declared... no Step #39 - "compile-libfuzzer-undefined-x86_64": checking C compiler flags needed for sse4.1... -msse4.1 -mssse3 -mpopcnt Step #39 - "compile-libfuzzer-undefined-x86_64": checking C compiler flags needed for avx2... -mavx2 -mpopcnt Step #39 - "compile-libfuzzer-undefined-x86_64": checking C compiler flags needed for avx512f... -mavx512f -mpopcnt Step #39 - "compile-libfuzzer-undefined-x86_64": checking for pkg-config... no Step #39 - "compile-libfuzzer-undefined-x86_64": checking for special C compiler options needed for large files... no Step #39 - "compile-libfuzzer-undefined-x86_64": checking for _FILE_OFFSET_BITS value needed for large files... no Step #39 - "compile-libfuzzer-undefined-x86_64": checking shared library type for unknown-Linux... plain .so Step #39 - "compile-libfuzzer-undefined-x86_64": checking whether the linker supports versioned symbols... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking whether the compiler accepts -fvisibility=hidden... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for stdlib.h... (cached) yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for unistd.h... (cached) yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for sys/param.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for getpagesize... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for working mmap... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for gmtime_r... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for fsync... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for drand48... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for srand48_deterministic... no Step #39 - "compile-libfuzzer-undefined-x86_64": checking whether fdatasync is declared... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for fdatasync... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for library containing log... none required Step #39 - "compile-libfuzzer-undefined-x86_64": checking for zlib.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for inflate in -lz... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for library containing recv... none required Step #39 - "compile-libfuzzer-undefined-x86_64": checking for bzlib.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for BZ2_bzBuffToBuffCompress in -lbz2... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for lzma.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for lzma_easy_buffer_encode in -llzma... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking whether htscodecs files are present... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for libdeflate.h... no Step #39 - "compile-libfuzzer-undefined-x86_64": checking for libdeflate_deflate_compress in -ldeflate... no Step #39 - "compile-libfuzzer-undefined-x86_64": checking for curl/curl.h... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for curl_easy_pause in -lcurl... yes Step #39 - "compile-libfuzzer-undefined-x86_64": checking for CCHmac... no Step #39 - "compile-libfuzzer-undefined-x86_64": checking for library containing HMAC... -lcrypto Step #39 - "compile-libfuzzer-undefined-x86_64": checking for library containing regcomp... none required Step #39 - "compile-libfuzzer-undefined-x86_64": configure: creating ./config.status Step #39 - "compile-libfuzzer-undefined-x86_64": config.status: creating config.mk Step #39 - "compile-libfuzzer-undefined-x86_64": config.status: creating htslib.pc.tmp Step #39 - "compile-libfuzzer-undefined-x86_64": config.status: creating config.h Step #39 - "compile-libfuzzer-undefined-x86_64": config.status: linking htscodecs_bundled.mk to htscodecs.mk Step #39 - "compile-libfuzzer-undefined-x86_64": ++ nproc Step #39 - "compile-libfuzzer-undefined-x86_64": + make -j32 libhts.a test/fuzz/hts_open_fuzzer.o Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o kfunc.o kfunc.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o kstring.o kstring.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o bcf_sr_sort.o bcf_sr_sort.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o bgzf.o bgzf.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o errmod.o errmod.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o faidx.o faidx.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o header.o header.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile.o hfile.c Step #39 - "compile-libfuzzer-undefined-x86_64": echo '#define HTS_VERSION_TEXT "1.18-1-gd1aae52"' > version.h Step #39 - "compile-libfuzzer-undefined-x86_64": printf '#define HTS_CC "%s"\n#define HTS_CPPFLAGS "%s"\n#define HTS_CFLAGS "%s"\n#define HTS_LDFLAGS "%s"\n#define HTS_LIBS "%s"\n' \ Step #39 - "compile-libfuzzer-undefined-x86_64": 'clang' \ Step #39 - "compile-libfuzzer-undefined-x86_64": '' \ Step #39 - "compile-libfuzzer-undefined-x86_64": '-Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden' \ Step #39 - "compile-libfuzzer-undefined-x86_64": '-fvisibility=hidden ' \ Step #39 - "compile-libfuzzer-undefined-x86_64": '-llzma -lbz2 -lz -lcurl -lcrypto' > config_vars.h Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hts_expr.o hts_expr.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hts_os.o hts_os.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o md5.o md5.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o multipart.o multipart.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o probaln.o probaln.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o realn.o realn.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o regidx.o regidx.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o region.o region.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o sam.o sam.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o sam_mods.o sam_mods.c Step #39 - "compile-libfuzzer-undefined-x86_64": awk: line 1: syntax error at or near , Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o synced_bcf_reader.o synced_bcf_reader.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o vcf_sweep.o vcf_sweep.c Step #39 - "compile-libfuzzer-undefined-x86_64": Updating htscodecs/htscodecs/version.h : #define HTSCODECS_VERSION_TEXT "-g2aca18b" Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o tbx.o tbx.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o textutils.o textutils.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o thread_pool.o thread_pool.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o vcf.o vcf.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o vcfutils.o vcfutils.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_codecs.o cram/cram_codecs.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_decode.o cram/cram_decode.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_encode.o cram/cram_encode.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_external.o cram/cram_external.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_index.o cram/cram_index.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_io.o cram/cram_io.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/cram_stats.o cram/cram_stats.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/mFILE.o cram/mFILE.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/open_trace_file.o cram/open_trace_file.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/pooled_alloc.o cram/pooled_alloc.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o cram/string_alloc.o cram/string_alloc.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/arith_dynamic.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/fqzcomp_qual.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/htscodecs.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/pack.o htscodecs/htscodecs/pack.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static4x16pr.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -mavx2 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx2.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -mavx512f -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_avx512.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -msse4.1 -mssse3 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_sse4.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr_neon.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static32x16pr.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rANS_static.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rle.o htscodecs/htscodecs/rle.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/tokenise_name3.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o htscodecs/htscodecs/utils.o htscodecs/htscodecs/utils.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_libcurl.o hfile_libcurl.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_gcs.o hfile_gcs.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_s3.o hfile_s3.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hfile_s3_write.o hfile_s3_write.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o test/fuzz/hts_open_fuzzer.o test/fuzz/hts_open_fuzzer.c Step #39 - "compile-libfuzzer-undefined-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -fvisibility=hidden -I. -c -o hts.o hts.c Step #39 - "compile-libfuzzer-undefined-x86_64": ar -rc libhts.a kfunc.o kstring.o bcf_sr_sort.o bgzf.o errmod.o faidx.o header.o hfile.o hts.o hts_expr.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o region.o sam.o sam_mods.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_stats.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/string_alloc.o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/pack.o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rle.o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/utils.o hfile_libcurl.o hfile_gcs.o hfile_s3.o hfile_s3_write.o Step #39 - "compile-libfuzzer-undefined-x86_64": ranlib libhts.a Step #39 - "compile-libfuzzer-undefined-x86_64": + clang++ -O1 -fno-omit-frame-pointer -gline-tables-only -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fsanitize=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unsigned-integer-overflow,unreachable,vla-bound,vptr -fno-sanitize-recover=array-bounds,bool,builtin,enum,float-divide-by-zero,function,integer-divide-by-zero,null,object-size,return,returns-nonnull-attribute,shift,signed-integer-overflow,unreachable,vla-bound,vptr -fsanitize=fuzzer-no-link -stdlib=libc++ -o /workspace/out/libfuzzer-undefined-x86_64/hts_open_fuzzer test/fuzz/hts_open_fuzzer.o -fsanitize=fuzzer libhts.a -lz -lbz2 -llzma -lcurl -lcrypto -lpthread Finished Step #39 - "compile-libfuzzer-undefined-x86_64" Starting Step #40 - "build-check-libfuzzer-undefined-x86_64" Step #40 - "build-check-libfuzzer-undefined-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #40 - "build-check-libfuzzer-undefined-x86_64": INFO: performing bad build checks for /tmp/not-out/tmpteh26loy/hts_open_fuzzer Finished Step #40 - "build-check-libfuzzer-undefined-x86_64" Starting Step #41 Step #41: Already have image (with digest): gcr.io/oss-fuzz-base/base-runner Finished Step #41 Starting Step #42 Step #42: Already have image: gcr.io/oss-fuzz/htslib Step #42: adding: hts_open_fuzzer (deflated 62%) Step #42: adding: llvm-symbolizer (deflated 64%) Finished Step #42 Starting Step #43 Step #43: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #43: % Total % Received % Xferd Average Speed Time Time Time Current Step #43: Dload Upload Total Spent Left Speed Step #43: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 153 0 0 100 153 0 641 --:--:-- --:--:-- --:--:-- 642 Finished Step #43 Starting Step #44 Step #44: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #44: % Total % Received % Xferd Average Speed Time Time Time Current Step #44: Dload Upload Total Spent Left Speed Step #44: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 4409k 0 0 100 4409k 0 16.3M --:--:-- --:--:-- --:--:-- 16.3M Finished Step #44 Starting Step #45 Step #45: Already have image (with digest): gcr.io/oss-fuzz-base/uploader Step #45: % Total % Received % Xferd Average Speed Time Time Time Current Step #45: Dload Upload Total Spent Left Speed Step #45: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 16 0 0 100 16 0 57 --:--:-- --:--:-- --:--:-- 57 Finished Step #45 Starting Step #46 Step #46: Already have image (with digest): gcr.io/cloud-builders/curl Step #46: % Total % Received % Xferd Average Speed Time Time Time Current Step #46: Dload Upload Total Spent Left Speed Step #46: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 33 0 0 100 33 0 202 --:--:-- --:--:-- --:--:-- 202 100 33 0 0 100 33 0 202 --:--:-- --:--:-- --:--:-- 201 Finished Step #46 Starting Step #47 Step #47: Already have image: gcr.io/oss-fuzz/htslib Finished Step #47 PUSH DONE