starting build "578f751b-2029-46b7-8e9d-b56f0092c3cc" FETCHSOURCE BUILD Starting Step #0 Step #0: Already have image (with digest): gcr.io/cloud-builders/git Step #0: Cloning into 'oss-fuzz'... Finished Step #0 Starting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd" Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Already have image (with digest): gcr.io/cloud-builders/docker Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Sending build context to Docker daemon 7.168kB Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Step 1/5 : FROM gcr.io/oss-fuzz-base/base-builder Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": latest: Pulling from oss-fuzz-base/base-builder Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": b549f31133a9: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1307789363dd: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 556626353af3: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7100a948421d: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c4336f41c7e1: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ca93fc2428f8: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a075df02cb67: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1b3b0ea09b6a: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7d439c17c6a8: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": e1f6dcb7cb9e: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 558b1891b15c: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 61323eef2228: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 5af5ac5ff22f: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c1084d7fb0a7: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c00865c8eac0: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c6e50ba0fc3c: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 419799ce61b3: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 9f462a7e6980: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a059854ca3b5: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cf43696d9606: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": fce5cde039be: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1c62897b2722: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7c6cb27fc6c0: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 66af8172fcb8: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a213901f7c02: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1eb809ba4d97: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cdd3b5763daf: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 02aa12c48942: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a7e5a41ebbb4: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c346a4719880: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 55e909155587: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 5510cd5bc1cd: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7932101cbe4e: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": fbb7847b9444: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 8926e3de8030: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 65a27e0bc377: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 569fee16aa5a: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 8e0786aba240: Pulling fs layer Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7d439c17c6a8: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 02aa12c48942: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": fce5cde039be: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": e1f6dcb7cb9e: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a7e5a41ebbb4: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 558b1891b15c: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c346a4719880: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1c62897b2722: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 61323eef2228: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 55e909155587: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7c6cb27fc6c0: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 5510cd5bc1cd: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 5af5ac5ff22f: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 66af8172fcb8: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7932101cbe4e: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c1084d7fb0a7: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": fbb7847b9444: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 8926e3de8030: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c00865c8eac0: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 65a27e0bc377: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c6e50ba0fc3c: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 569fee16aa5a: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 419799ce61b3: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cf43696d9606: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 8e0786aba240: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 9f462a7e6980: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a075df02cb67: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1b3b0ea09b6a: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a059854ca3b5: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a213901f7c02: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1eb809ba4d97: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cdd3b5763daf: Waiting Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c4336f41c7e1: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 556626353af3: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 556626353af3: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a075df02cb67: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": b549f31133a9: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": b549f31133a9: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1b3b0ea09b6a: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7100a948421d: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7100a948421d: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 558b1891b15c: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 558b1891b15c: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 61323eef2228: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 61323eef2228: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c1084d7fb0a7: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c1084d7fb0a7: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 5af5ac5ff22f: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 5af5ac5ff22f: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c6e50ba0fc3c: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c00865c8eac0: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c00865c8eac0: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1307789363dd: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1307789363dd: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 9f462a7e6980: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 9f462a7e6980: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 419799ce61b3: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 419799ce61b3: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a059854ca3b5: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a059854ca3b5: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": e1f6dcb7cb9e: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": e1f6dcb7cb9e: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1c62897b2722: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": b549f31133a9: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": fce5cde039be: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": fce5cde039be: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cf43696d9606: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cf43696d9606: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7c6cb27fc6c0: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7c6cb27fc6c0: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 66af8172fcb8: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 66af8172fcb8: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a213901f7c02: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a213901f7c02: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1eb809ba4d97: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cdd3b5763daf: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a7e5a41ebbb4: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a7e5a41ebbb4: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 02aa12c48942: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 02aa12c48942: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 55e909155587: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 55e909155587: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7d439c17c6a8: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7d439c17c6a8: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c346a4719880: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c346a4719880: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7932101cbe4e: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7932101cbe4e: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 5510cd5bc1cd: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 5510cd5bc1cd: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": fbb7847b9444: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": fbb7847b9444: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 65a27e0bc377: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 65a27e0bc377: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 8926e3de8030: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 569fee16aa5a: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 569fee16aa5a: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 8e0786aba240: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 8e0786aba240: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ca93fc2428f8: Verifying Checksum Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ca93fc2428f8: Download complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1307789363dd: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 556626353af3: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7100a948421d: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c4336f41c7e1: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ca93fc2428f8: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a075df02cb67: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1b3b0ea09b6a: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7d439c17c6a8: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": e1f6dcb7cb9e: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 558b1891b15c: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 61323eef2228: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 5af5ac5ff22f: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c1084d7fb0a7: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c00865c8eac0: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c6e50ba0fc3c: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 419799ce61b3: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 9f462a7e6980: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a059854ca3b5: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cf43696d9606: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": fce5cde039be: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1c62897b2722: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7c6cb27fc6c0: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 66af8172fcb8: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a213901f7c02: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 1eb809ba4d97: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cdd3b5763daf: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 02aa12c48942: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": a7e5a41ebbb4: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": c346a4719880: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 55e909155587: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 5510cd5bc1cd: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 7932101cbe4e: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": fbb7847b9444: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 8926e3de8030: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 65a27e0bc377: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 569fee16aa5a: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 8e0786aba240: Pull complete Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Digest: sha256:6dd7113e000cf047f96c612ae9d960629578c319e7c78a9f67833bc95b80f0c3 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Status: Downloaded newer image for gcr.io/oss-fuzz-base/base-builder:latest Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ---> 6fa80cece3b7 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Step 2/5 : RUN apt-get update && apt install -y cmake Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ---> Running in 094c0522fba1 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Hit:1 http://archive.ubuntu.com/ubuntu focal InRelease Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Hit:2 http://security.ubuntu.com/ubuntu focal-security InRelease Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Hit:3 http://archive.ubuntu.com/ubuntu focal-updates InRelease Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Hit:4 http://archive.ubuntu.com/ubuntu focal-backports InRelease Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Reading package lists... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd":  Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": WARNING: apt does not have a stable CLI interface. Use with caution in scripts. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Reading package lists... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Building dependency tree... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Reading state information... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": The following packages were automatically installed and are no longer required: Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": autotools-dev libsigsegv2 m4 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Use 'apt autoremove' to remove them. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": The following additional packages will be installed: Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cmake-data libarchive13 libicu66 libjsoncpp1 librhash0 libuv1 libxml2 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Suggested packages: Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cmake-doc ninja-build lrzip Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": The following NEW packages will be installed: Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": cmake cmake-data libarchive13 libicu66 libjsoncpp1 librhash0 libuv1 libxml2 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Need to get 15.0 MB of archives. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": After this operation, 65.0 MB of additional disk space will be used. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Get:1 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libicu66 amd64 66.1-2ubuntu2.1 [8515 kB] Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Get:2 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libxml2 amd64 2.9.10+dfsg-5ubuntu0.20.04.10 [640 kB] Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Get:3 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1 amd64 1.34.2-1ubuntu1.5 [80.9 kB] Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Get:4 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 cmake-data all 3.16.3-1ubuntu1.20.04.1 [1613 kB] Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Get:5 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libarchive13 amd64 3.4.0-2ubuntu1.5 [327 kB] Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Get:6 http://archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Get:7 http://archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Get:8 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 cmake amd64 3.16.3-1ubuntu1.20.04.1 [3668 kB] Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": debconf: delaying package configuration, since apt-utils is not installed Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Fetched 15.0 MB in 0s (51.7 MB/s) Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Selecting previously unselected package libicu66:amd64. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17483 files and directories currently installed.) Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Preparing to unpack .../0-libicu66_66.1-2ubuntu2.1_amd64.deb ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Unpacking libicu66:amd64 (66.1-2ubuntu2.1) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Selecting previously unselected package libxml2:amd64. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Preparing to unpack .../1-libxml2_2.9.10+dfsg-5ubuntu0.20.04.10_amd64.deb ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Unpacking libxml2:amd64 (2.9.10+dfsg-5ubuntu0.20.04.10) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Selecting previously unselected package libuv1:amd64. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Preparing to unpack .../2-libuv1_1.34.2-1ubuntu1.5_amd64.deb ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Unpacking libuv1:amd64 (1.34.2-1ubuntu1.5) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Selecting previously unselected package cmake-data. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Preparing to unpack .../3-cmake-data_3.16.3-1ubuntu1.20.04.1_all.deb ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Unpacking cmake-data (3.16.3-1ubuntu1.20.04.1) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Selecting previously unselected package libarchive13:amd64. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Preparing to unpack .../4-libarchive13_3.4.0-2ubuntu1.5_amd64.deb ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Unpacking libarchive13:amd64 (3.4.0-2ubuntu1.5) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Selecting previously unselected package libjsoncpp1:amd64. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Preparing to unpack .../5-libjsoncpp1_1.7.4-3.1ubuntu2_amd64.deb ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Unpacking libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Selecting previously unselected package librhash0:amd64. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Preparing to unpack .../6-librhash0_1.3.9-1_amd64.deb ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Unpacking librhash0:amd64 (1.3.9-1) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Selecting previously unselected package cmake. Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Preparing to unpack .../7-cmake_3.16.3-1ubuntu1.20.04.1_amd64.deb ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Unpacking cmake (3.16.3-1ubuntu1.20.04.1) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Setting up libicu66:amd64 (66.1-2ubuntu2.1) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Setting up libuv1:amd64 (1.34.2-1ubuntu1.5) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Setting up librhash0:amd64 (1.3.9-1) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Setting up cmake-data (3.16.3-1ubuntu1.20.04.1) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Setting up libxml2:amd64 (2.9.10+dfsg-5ubuntu0.20.04.10) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Setting up libarchive13:amd64 (3.4.0-2ubuntu1.5) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Setting up cmake (3.16.3-1ubuntu1.20.04.1) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Processing triggers for libc-bin (2.31-0ubuntu9.18) ... Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Removing intermediate container 094c0522fba1 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ---> f4e19a6321a9 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Step 3/5 : RUN git clone --depth 1 https://github.com/openbabel/openbabel.git Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ---> Running in 06c43fb6a706 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Cloning into 'openbabel'... 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Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Removing intermediate container 06c43fb6a706 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ---> b2232b857cc6 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Step 4/5 : COPY *.sh $SRC/ Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ---> 9c2b1756aa70 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Step 5/5 : WORKDIR $SRC/openbabel Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ---> Running in a0d3e06393d0 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Removing intermediate container a0d3e06393d0 Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": ---> 1ab13a611e8a Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Successfully built 1ab13a611e8a Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Successfully tagged gcr.io/oss-fuzz/openbabel:latest Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd": Successfully tagged us-central1-docker.pkg.dev/oss-fuzz/unsafe/openbabel:latest Finished Step #1 - "build-7078a314-7959-4591-ab44-1074b30d77cd" Starting Step #2 - "srcmap" Step #2 - "srcmap": Already have image: gcr.io/oss-fuzz/openbabel Step #2 - "srcmap": ++ tempfile Step #2 - "srcmap": + SRCMAP=/tmp/fileb4BCfO Step #2 - "srcmap": + echo '{}' Step #2 - "srcmap": + PATHS_TO_SCAN=/src Step #2 - "srcmap": + [[ c++ == \g\o ]] Step #2 - "srcmap": ++ find /src -name .git -type d Step #2 - "srcmap": + for DOT_GIT_DIR in $(find $PATHS_TO_SCAN -name ".git" -type d) Step #2 - "srcmap": ++ dirname /src/openbabel/.git Step #2 - "srcmap": + GIT_DIR=/src/openbabel Step #2 - "srcmap": + cd /src/openbabel Step #2 - "srcmap": ++ git config --get remote.origin.url Step #2 - "srcmap": + GIT_URL=https://github.com/openbabel/openbabel.git Step #2 - "srcmap": ++ git rev-parse HEAD Step #2 - "srcmap": + GIT_REV=faaec782dcf55a0466f4a0493798fd8ed06a26c8 Step #2 - "srcmap": + jq_inplace /tmp/fileb4BCfO '."/src/openbabel" = { type: "git", url: "https://github.com/openbabel/openbabel.git", rev: "faaec782dcf55a0466f4a0493798fd8ed06a26c8" }' Step #2 - "srcmap": ++ tempfile Step #2 - "srcmap": + F=/tmp/fileGM2E0c Step #2 - "srcmap": + cat /tmp/fileb4BCfO Step #2 - "srcmap": + jq '."/src/openbabel" = { type: "git", url: "https://github.com/openbabel/openbabel.git", rev: "faaec782dcf55a0466f4a0493798fd8ed06a26c8" }' Step #2 - "srcmap": + mv /tmp/fileGM2E0c /tmp/fileb4BCfO Step #2 - "srcmap": ++ find /src -name .svn -type d Step #2 - "srcmap": ++ find /src -name .hg -type d Step #2 - "srcmap": + '[' '' '!=' '' ']' Step #2 - "srcmap": + cat /tmp/fileb4BCfO Step #2 - "srcmap": + rm /tmp/fileb4BCfO Step #2 - "srcmap": { Step #2 - "srcmap": "/src/openbabel": { Step #2 - "srcmap": "type": "git", Step #2 - "srcmap": "url": "https://github.com/openbabel/openbabel.git", Step #2 - "srcmap": "rev": "faaec782dcf55a0466f4a0493798fd8ed06a26c8" Step #2 - "srcmap": } Step #2 - "srcmap": } Finished Step #2 - "srcmap" Starting Step #3 - "compile-libfuzzer-coverage-x86_64" Step #3 - "compile-libfuzzer-coverage-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #3 - "compile-libfuzzer-coverage-x86_64": --------------------------------------------------------------- Step #3 - "compile-libfuzzer-coverage-x86_64": vm.mmap_rnd_bits = 28 Step #3 - "compile-libfuzzer-coverage-x86_64": Compiling libFuzzer to /usr/lib/libFuzzingEngine.a... done. Step #3 - "compile-libfuzzer-coverage-x86_64": --------------------------------------------------------------- Step #3 - "compile-libfuzzer-coverage-x86_64": CC=clang Step #3 - "compile-libfuzzer-coverage-x86_64": CXX=clang++ Step #3 - "compile-libfuzzer-coverage-x86_64": CFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument Step #3 - "compile-libfuzzer-coverage-x86_64": CXXFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -stdlib=libc++ Step #3 - "compile-libfuzzer-coverage-x86_64": RUSTFLAGS=--cfg fuzzing -Cdebuginfo=1 -Cforce-frame-pointers -Cinstrument-coverage -C link-arg=-lc++ Step #3 - "compile-libfuzzer-coverage-x86_64": --------------------------------------------------------------- Step #3 - "compile-libfuzzer-coverage-x86_64": + export 'CXXFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -stdlib=libc++ -std=c++17' Step #3 - "compile-libfuzzer-coverage-x86_64": + CXXFLAGS='-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -stdlib=libc++ -std=c++17' Step #3 - "compile-libfuzzer-coverage-x86_64": + sed -i 's/CMAKE_CXX_STANDARD 11/CMAKE_CXX_STANDARD 17/g' CMakeLists.txt Step #3 - "compile-libfuzzer-coverage-x86_64": + sed -i 's/std::random/\/\/std::random/g' test/addhtest.cpp test/aliastest.cpp test/aligntest.cpp test/aromatest.cpp test/atom.cpp test/automorphismtest.cpp test/bond.cpp test/buildertest.cpp test/canonconsistenttest.cpp test/canonfragmenttest.cpp test/canonstabletest.cpp test/cansmi.cpp test/carspacegrouptest.cpp test/charge_gasteiger.cpp test/charge_mmff94.cpp test/cifspacegrouptest.cpp test/cistranstest.cpp test/cmlreadfile.cpp test/conversion.cpp test/conversiontest.cpp test/datatest.cpp test/ffgaff.cpp test/ffghemical.cpp test/ffmmff94.cpp test/ffuff.cpp test/formalcharge.cpp test/format.cpp test/formula.cpp test/fuzzregresstest.cpp test/graphsymtest.cpp test/gziptest.cpp test/implicitHtest.cpp test/inchiwrite.cpp test/internalcoord.cpp test/invalidsmarts.cpp test/invalidsmiles.cpp test/isomorphismtest.cpp test/iterators.cpp test/logp_psa.cpp test/lssrtest.cpp test/maereadertest.cpp test/math.cpp test/mmff94validate.cpp test/mol.cpp test/multicmltest.cpp test/obmolbenchmark.cpp test/obtest.cpp test/pdbreadfile.cpp test/periodictest.cpp test/phmodel.cpp test/regressionstest.cpp test/residue.cpp test/ringtest.cpp test/rotortest.cpp test/roundtrip.cpp test/shuffletest.cpp test/smartsparse.cpp test/smartstest.cpp test/smilesmatch.cpp test/smilestest.cpp test/smileytest.cpp test/spectrophoretest.cpp test/squareplanartest.cpp test/stereoperceptiontest.cpp test/stereotest.cpp test/strip.cpp test/tautomertest.cpp test/tetrahedraltest.cpp test/tetranonplanartest.cpp test/tetraplanartest.cpp test/uniqueidtest.cpp test/unitcell.cpp test/zipstream.cpp Step #3 - "compile-libfuzzer-coverage-x86_64": + mkdir build Step #3 - "compile-libfuzzer-coverage-x86_64": + cd build Step #3 - "compile-libfuzzer-coverage-x86_64": + cmake .. -DBUILD_SHARED=OFF -DBUILD_MIXED=ON Step #3 - "compile-libfuzzer-coverage-x86_64": -- The C compiler identification is Clang 22.0.0 Step #3 - "compile-libfuzzer-coverage-x86_64": -- The CXX compiler identification is Clang 22.0.0 Step #3 - "compile-libfuzzer-coverage-x86_64": -- Detecting C compiler ABI info Step #3 - "compile-libfuzzer-coverage-x86_64": -- Detecting C compiler ABI info - done Step #3 - "compile-libfuzzer-coverage-x86_64": -- Check for working C compiler: /usr/local/bin/clang - skipped Step #3 - "compile-libfuzzer-coverage-x86_64": -- Detecting C compile features Step #3 - "compile-libfuzzer-coverage-x86_64": -- Detecting C compile features - done Step #3 - "compile-libfuzzer-coverage-x86_64": -- Detecting CXX compiler ABI info Step #3 - "compile-libfuzzer-coverage-x86_64": -- Detecting CXX compiler ABI info - done Step #3 - "compile-libfuzzer-coverage-x86_64": -- Check for working CXX compiler: /usr/local/bin/clang++ - skipped Step #3 - "compile-libfuzzer-coverage-x86_64": -- Detecting CXX compile features Step #3 - "compile-libfuzzer-coverage-x86_64": -- Detecting CXX compile features - done Step #3 - "compile-libfuzzer-coverage-x86_64": -- Using included inchi library. Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find LibXml2 (missing: LIBXML2_LIBRARY LIBXML2_INCLUDE_DIR) Step #3 - "compile-libfuzzer-coverage-x86_64": CMake Warning at CMakeLists.txt:161 (message): Step #3 - "compile-libfuzzer-coverage-x86_64": libxml2 not found - disabling CML support! Step #3 - "compile-libfuzzer-coverage-x86_64": Step #3 - "compile-libfuzzer-coverage-x86_64":  Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find ZLIB (missing: ZLIB_LIBRARY ZLIB_INCLUDE_DIR) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find wxWidgets (missing: wxWidgets_LIBRARIES wxWidgets_INCLUDE_DIRS) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for conio.h Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for conio.h - not found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for sys/time.h Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for sys/time.h - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for time.h Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for time.h - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for strings.h Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for strings.h - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for regex.h Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for regex.h - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for C++ include sstream Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for C++ include sstream - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for rint Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for rint - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for snprintf Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for snprintf - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for sranddev Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for sranddev - not found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for strcasecmp Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for strcasecmp - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for strncasecmp Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for strncasecmp - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for xdrstdio_create Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for xdrstdio_create - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for dlopen in dl Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for dlopen in dl - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for sys/types.h Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for sys/types.h - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for stdint.h Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for stdint.h - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for stddef.h Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for stddef.h - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- Check size of clock_t Step #3 - "compile-libfuzzer-coverage-x86_64": -- Check size of clock_t - done Step #3 - "compile-libfuzzer-coverage-x86_64": -- Performing Test SCANDIR_NEEDS_CONST Step #3 - "compile-libfuzzer-coverage-x86_64": -- Performing Test SCANDIR_NEEDS_CONST - Failed Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find Boost (missing: Boost_INCLUDE_DIR program_options iostreams) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find Eigen3 (missing: Eigen3_DIR) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0") Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find Boost (missing: Boost_INCLUDE_DIR filesystem iostreams unit_test_framework) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Maestro formats will NOT be supported. Please install Boost to enable Maestro formats. Step #3 - "compile-libfuzzer-coverage-x86_64": -- Coordinate generation with Coordgen will NOT be supported. Please install Boost to enable Maestro formats. Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find RapidJSON (missing: RAPIDJSON_INCLUDE_DIRS) (Required is at least version "1.1.0") Step #3 - "compile-libfuzzer-coverage-x86_64": -- Downloaded RapidJSON to /src/openbabel/external/rapidjson-7c73dd7de7c4f14379b781418c6e947ad464c818. Step #3 - "compile-libfuzzer-coverage-x86_64": -- JSON formats will be supported. Using RapidJSON 7c73dd7de7c4f14379b781418c6e947ad464c818 at /src/openbabel/external/rapidjson-7c73dd7de7c4f14379b781418c6e947ad464c818/include Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find Cairo (missing: CAIRO_LIBRARIES CAIRO_INCLUDE_DIRS) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find Cairo. PNG output will NOT be supported. Step #3 - "compile-libfuzzer-coverage-x86_64": -- Found Perl: /usr/bin/perl (found version "5.30.0") Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find Boost (missing: Boost_INCLUDE_DIR system) (Required is at least version "1.45.0") Step #3 - "compile-libfuzzer-coverage-x86_64": -- Performing Test CMAKE_HAVE_LIBC_PTHREAD Step #3 - "compile-libfuzzer-coverage-x86_64": -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success Step #3 - "compile-libfuzzer-coverage-x86_64": -- Found Threads: TRUE Step #3 - "compile-libfuzzer-coverage-x86_64": -- Could NOT find Boost (missing: Boost_INCLUDE_DIR program_options iostreams) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for getopt Step #3 - "compile-libfuzzer-coverage-x86_64": -- Looking for getopt - found Step #3 - "compile-libfuzzer-coverage-x86_64": -- GUI will not be built Step #3 - "compile-libfuzzer-coverage-x86_64": -- Found Python: /usr/local/bin/python3.11 (found version "3.11.13") found components: Interpreter Step #3 - "compile-libfuzzer-coverage-x86_64": -- Configuring done (3.7s) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Generating done (0.1s) Step #3 - "compile-libfuzzer-coverage-x86_64": -- Build files have been written to: /src/openbabel/build Step #3 - "compile-libfuzzer-coverage-x86_64": ++ nproc Step #3 - "compile-libfuzzer-coverage-x86_64": + make -j 32 Step #3 - "compile-libfuzzer-coverage-x86_64": [ 0%] Generating atomtyp.h Step #3 - "compile-libfuzzer-coverage-x86_64": [ 0%] Generating bondtyp.h Step #3 - "compile-libfuzzer-coverage-x86_64": [ 1%] Generating phmodeldata.h Step #3 - "compile-libfuzzer-coverage-x86_64": [ 1%] Generating resdata.h Step #3 - "compile-libfuzzer-coverage-x86_64": [ 1%] Generating torlib.h Step #3 - "compile-libfuzzer-coverage-x86_64": [ 1%] Generating types.h Step #3 - "compile-libfuzzer-coverage-x86_64": [ 2%] Generating atomizationenergies.h Step #3 - "compile-libfuzzer-coverage-x86_64": [ 2%] Generating spacegroups.h Step #3 - "compile-libfuzzer-coverage-x86_64": [ 2%] Generating ringtyp.h Step #3 - "compile-libfuzzer-coverage-x86_64": [ 2%] Built target data_headers Step #3 - "compile-libfuzzer-coverage-x86_64": [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/alias.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/atom.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/base.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/bond.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/canon.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/builder.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/chains.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/data.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/data_utilities.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/descriptor.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/elements.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprint.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/forcefield.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/format.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/generic.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/graphsym.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/grid.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/griddata.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/isomorphism.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/kekulize.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/locale.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/matrix.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/molchrg.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/mol.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/mcdlutil.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/oberror.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/obconversion.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/obfunctions.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/obiter.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/obutil.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": In file included from /src/openbabel/src/grid.cpp:24: Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:118:11: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 118 | if (_ival) delete [] _ival; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": In file included from /src/openbabel/src/grid.cpp:24: Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:118:28: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 118 | if (_ival) delete [] _ival; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/grid.cpp:82:5: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 82 | _ival=nullptr; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/op.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/parsmart.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/molchrg.cpp:297:10: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 297 | if (!IsNearZero(val[2])) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": In file included from /src/openbabel/src/griddata.cpp:27: Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:118:11: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 118 | if (_ival) delete [] _ival; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": In file included from /src/openbabel/src/griddata.cpp:27: Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:118:28: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 118 | if (_ival) delete [] _ival; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/bond.cpp:124:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 124 | if (IsNearZero(v3.length_2())) { // too small to normalize, move the atoms apart Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/patty.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/mcdlutil.cpp:5035:95: warning: add explicit braces to avoid dangling else [-Wdangling-else] Step #3 - "compile-libfuzzer-coverage-x86_64": 5035 | if (test2) for (j=0; jnBonds(); j++) if (bSTested[j]>=0) (*bondLabel)[j]=1; else (*bondLabel)[j]=0; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/atom.cpp:826:62: warning: 'PathSize' is deprecated: Use Size() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 826 | if ((*i)->IsInRing(GetIdx()) && static_cast<int>((*i)->PathSiIn file included from ze()/src/openbabel/src/forcefield.cpp) == :si34: Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:118:11: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": ze) Step #3 - "compile-libfuzzer-coverage-x86_64": 118|  ^ Step #3 - "compile-libfuzzer-coverage-x86_64":  | /src/openbabel/include/openbabel/ring.h:65:5: note: 'PathSize' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 65 | OB_DEPRECATED_MSG("Use Size() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h i:f38: (_ival) delete [] _i38val; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:105: :5: note: '_ival' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": note:  105expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | | OB_DEPRECATED in#dt *_ivalefi; //!< for intene ger OB_DvaluesE \depPrecated Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37RECAT:29: ED_note: MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": In file included from /src/openbabel/src/forcefield.cpp:34: Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:118:28: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 118 | if (_ival) delete [] _ival; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/phmodel.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/atom.cpp:1143:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1143 | if (IsNearZero(v1.length(), 1.0e-3) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/atom.cpp:1144:10: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1144 | || IsNearZero(v2.length(), 1.0e-3)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:482:31: warning: 'VectorLengthDerivative' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 482 | rab = OBForceField::VectorLengthDerivative(da, db); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/forcefield.h:1523:5: note: 'VectorLengthDerivative' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 1523 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:499:33: warning: 'VectorAngleDerivative' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 499 | theta = OBForceField::VectorAngleDerivative(da, db, dc); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/forcefield.h:1539:5: note: 'VectorAngleDerivative' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 1539 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:518:33: warning: 'VectorTorsionDerivative' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 518 | theta = OBForceField::VectorTorsionDerivative(da, db, dc, dd); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/forcefield.h:1572:5: note: 'VectorTorsionDerivative' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 1572 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/plugin.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1180:8: warning: 'SetFixAtoms' is deprecated: See SetFixedBonds() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1180 | rl.SetFixAtoms(fixed); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:633:5: note: 'SetFixAtoms' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 633 | OB_DEPRECATED_MSG("See SetFixedBonds()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1193:32: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1193 | combinations *= rotor->GetResolution().size(); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1213:33: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1213 | rotorKeys.AddRotor(rotor->GetResolution().size()); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1301:8: warning: 'SetFixAtoms' is deprecated: See SetFixedBonds() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1301 | rl.SetFixAtoms(fixed); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:633:5: note: 'SetFixAtoms' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 633 | OB_DEPRECATED_MSG("See SetFixedBonds()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:310:19: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 310 | if (bond2 == VZero || v1 == VZero) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:310:34: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 310 | if (bond2 == VZero || v1 == VZero) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:359:21: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 359 | if (bond1 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1372 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": :3238 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": : warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:361:26: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 361 | else  i1372f (bond2 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB | _DEPR for (j = 0; j < rECATED_Motor->GetResolSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_ution().size(); j++) { DEPRECA/T/ED_MSG F(mor sg) [each[depre rotorca ted(mpsg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": o |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": sition Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: /src/openbabel/src/builder.cpp:430:23: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 430 | if (bond1 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  38 | ^ #define OB_DEPRECA Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5:T note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OBED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^_ Step #3 - "compile-libfuzzer-coverage-x86_64": DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:432:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 432 | else if (bond2 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:434:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 434 | else if (bond3 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1444:8: warning: 'SetFixAtoms' is deprecated: See SetFixedBonds() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1444 | rl.SetFixAtoms(fixed); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:633:5: note: 'SetFixAtoms' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 633 | OB/src/openbabel/src/builder.cpp:450:23:_DEPRECATED warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 450 | if (bond1 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:452:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 452 | else if (bond2 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:454:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": _ 454 | else if (bond3 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[MSG("See SetFixedBonds()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1457:32: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1457 | combinations *= rotor->GetResolution().size(); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1482:52: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1482 | rotorKey[i] = generator.NextInt() % rotor->GetResolution().size(); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1622:8: warning: 'SetFixAtoms' is deprecated: See SetFixedBonds() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1622 | rl.SetFixAtoms(fixed); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:633:5: note: 'SetFixAtoms' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 633 | OB_DEPRECATED_MSG("See SetFixedBonds()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1635:32: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1635 | combinations *= rotor->GetResolution().size(); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1685:43: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1685 | for (unsigned int j = 0; j < rotor->GetResolution().size(); j++) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1712:43: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1712 | for (unsigned int j = 0; j < rotor->GetResolution().size(); j++) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1719:43: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1719 | for (unsigned int j = 0; j < rotor->GetResolution().size(); j++) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1720:13: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1720 | if (IsNear(worstE, bestE, 1.0e-3)) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1721:31: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1721 | weight = 1 / rotor->GetResolution().size(); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:1761:45: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1761 | for (unsigned int j = 0; j < rotor->GetResolution().size(); j++) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:469:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 469 | if (bond1 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:471:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 471 | else if (bond2 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:473:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 473 | else if (bond3 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:494:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 494 | if (bond1 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:496:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 496 | else if (bond2 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:498:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 498 | else if (bond3 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:514:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 514 | if (bond1 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:516:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 516 | else if (bond2 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:518:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 518 | else if (bond3 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MS/src/openbabel/src/forcefield.cpp:2420:9:G("Use ve warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations]cto Step #3 - "compile-libfuzzer-coverage-x86_64": r3::IsApprox( 2420 | ) insif (tead.IsNear") Step #3 - "compile-libfuzzer-coverage-x86_64": Zero(scale)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:2539:11: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2539 |  /src/openbabel/src/builder.cpp:520:28: warning: if (IsNear(e_n2, e_n1, 1.0e-3)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:2657:11: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2657 | if (IsNear(e_n2, e_n1, 1.0e-7)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:2725:13: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2725 | if (IsNear(e_n2, e_n1, 1.0e-7)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:2838:11: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2838 | if (IsNear(e_n2, _e_n1, _econv) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 520 | else if (bond4 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:533:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 533 | if (bond/src/openbabel/src/forcefield.cpp:3039:11: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1 3039 | if (IsNear(e_n2, _e_n1, _econv) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64":  /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": == VZ 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": ero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:535:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 535 | else if (bond2 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:537:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 537 | else if (bond3 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:539:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 539 | else if (bond4 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:564:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 564 | if (bond1 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:566:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 566 | else if (bond2 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:568:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 568 | else if (bond3 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:570:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 570 | else if (bond4 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:572:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 572 | else if (bond5 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3719:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3719 | if (IsNearZero(l_ij) || IsNearZero(l_jk)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3719:29: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3719 | if (IsNearZero(l_ij) || IsNearZero(l_jk)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3735:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3735 | if (IsNearZero(length)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3789:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3789 | if (IsNearZero(l_ij) || IsNearZero(l_jk)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3789:29: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3789 | if (IsNearZero(l_ij) || IsNearZero(l_jk)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3802:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3802 | if (IsNearZero(length)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:660:21: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 660 | if (bond1 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3949:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3949 | if (IsNearZero(length_ji)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3962:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3962 | if (IsNea/src/openbabel/src/builder.cppr:Zero(length_jk)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3973:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3973 | if (IsNearZero(length_jl)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3991:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3991 | if (IsNearZero(theta) || IsNearZero(fabs(theta - M_PI))) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:3991:30: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3991 | if (IsNearZero(theta) || IsNearZero(fabs(theta - M_PI))) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4006:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4006 | if (IsNearZero(dl) || IsNearZero(fabs(dl - M_PI))) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4006:27: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4006 | if (IsNearZero(dl) || IsNearZero(fabs(dl - M_PI))) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4067:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4067 | if (IsNearZero(length_ji)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4076:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4076 | if (IsNearZero(length_jk)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4083:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4083 | if (IsNearZero(length_jl)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4097:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4097 | if (IsNearZero(theta) || IsNearZero(fabs(theta - M_PI))) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4097:30: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4097 | if (IsNearZero(theta) || IsNearZero(fabs(theta - M_PI))) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 718 198 | OB_DEPRE:C23A:T EDwarning: Step #3 - "compile-libfuzzer-coverage-x86_64":  | 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] ^ Step #3 - "compile-libfuzzer-coverage-x86_64": Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 718 | 37 | # d efiifne (ObBo_nDdE1P R=E=C AVTZEeDr o[)[d Step #3 - "compile-libfuzzer-coverage-x86_64": e p| re ^c Step #3 - "compile-libfuzzer-coverage-x86_64": ated]]/src/openbabel/include/openbabel/math/vector3.h: Step #3 - "compile-libfuzzer-coverage-x86_64": 273 :| 5: ^ Step #3 - "compile-libfuzzer-coverage-x86_64": note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:720:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 720 | else if (bond2 == VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4195:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4195 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4195:29: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4195 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4195:49: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4195 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4285:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4285 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4285:29: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4285 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefield.cpp:4285:49: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 4285 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:1089:9: warning: 'GetFirstAtom' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1089 | mol.GetFirstAtom()->GetHyb(); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/mol.h:287:5: note: 'GetFirstAtom' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 287 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/mol.cpp:2799:29: warning: 'operator!=' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2799 | if (atom->GetVector() != VZero) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:278:5: note: 'operator!=' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 278 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/mol.cpp:2814:23: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2814 | if (!hasX && !IsNearZero(atom->x())) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/mol.cpp:2816:23: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2816 | if (!hasY && !IsNearZero(atom->y())) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/mol.cpp:2837:23: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2837 | if (!hasX && !IsNearZero(atom->x())) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/mol.cpp:2839:23: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2839 | if (!hasY && !IsNearZero(atom->y())) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/mol.cpp:2841:23: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2841 | if (!hasZ && !IsNearZero(atom->z())) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/builder.cpp:1427:17: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1427 | if (bond1 == VZero) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/mol.cpp:3263:24: warning: 'PathSize' is deprecated: Use Size() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3263 | if ((*ringit)->PathSize() == 5) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/ring.h:65:5: note: 'PathSize' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 65 | OB_DEPRECATED_MSG("Use Size() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/mol.cpp:3285:29: warning: 'PathSize' is deprecated: Use Size() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3285 | else if ((*ringit)->PathSize() == 6) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/ring.h:65:5: note: 'PathSize' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 65 | OB_DEPRECATED_MSG("Use Size() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/mol.cpp:3354:31: warning: 'PathSize' is deprecated: Use Size() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 3354 | loopSize = (*ringit)->PathSize(); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/ring.h:65:5: note: 'PathSize' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 65 | OB_DEPRECATED_MSG("Use Size() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/query.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/rand.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 2 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/reactionfacade.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 3 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/residue.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/ring.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/rotamer.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/rotor.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/spectrophore.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/tautomer.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/tokenst.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/transform.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/typer.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/obmolecformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/formats/smilesformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mdlformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mol2format.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pdbformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/formats/asciiformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/formats/copyformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/formats/MNAformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 3 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/formats/molreport.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/rotor.cpp:114:14: warning: 'HasFixedAtoms' is deprecated: See HasFixedBonds() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 114 | if ((HasFixedAtoms() || HasFixedBonds()) && IsFixedBond(bond)) Step #3 - "compile-libfuzzer-coverage-x86_64": [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/formats/nulformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:643:5: note: 'HasFixedAtoms' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 643 | OB_DEPRECATED_MSG("See HasFixedBonds()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/rotor.cpp:138:14: warning: 'SetNumCoords' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 138 | rotor->SetNumCoords(mol.NumAtoms()*3); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:452:5: note: 'SetNumCoords' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 452 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/rotamer.cpp:232:32: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 232 | _vres.push_back(rotor->GetResolution()); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/rotor.cpp:318:65: warning: 'HasFixedAtoms' is deprecated: See HasFixedBonds() [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 318 | if (!((OBBond*)*k)->IsRotor(_ringRotors)||((HasFixedAtoms()||HasFixedBonds())&&IsFixedBond((OBBond*)*k))) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:643:5: note: 'HasFixedAtoms' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 643 | OB_DEPRECATED_MSG("See HasFixedBonds()") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/rotor.cpp:336:16: warning: 'SetEvalAtoms' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 336 | rotor->SetEvalAtoms(eval); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:443:5: note: 'SetEvalAtoms' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 443 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/rotor.cpp:355:14: warning: 'SetDelta' is deprecated: Has no effect. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 355 | rotor->SetDelta(delta); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/rotor.h:428:5: note: 'SetDelta' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 428 | OB_DEPRECATED_MSG("Has no effect.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/formats/painterformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/formats/povrayformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/formats/reportformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/formats/svgformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 24%] Building CXX object src/CMakeFiles/openbabel.dir/formats/textformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 24%] Building CXX object src/CMakeFiles/openbabel.dir/formats/titleformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 24%] Building CXX object src/CMakeFiles/openbabel.dir/formats/acesformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 25%] Building CXX object src/CMakeFiles/openbabel.dir/formats/abinitformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 25%] Building CXX object src/CMakeFiles/openbabel.dir/formats/adfformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 25%] Building CXX object src/CMakeFiles/openbabel.dir/formats/aoforceformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 26%] Building CXX object src/CMakeFiles/openbabel.dir/formats/castepformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/mol2format.cpp:372:14: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 372 | if (!IsNearZero(pcharge)) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 26%] Building CXX object src/CMakeFiles/openbabel.dir/formats/crystal09format.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 26%] Building CXX object src/CMakeFiles/openbabel.dir/formats/daltonformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 27%] Building CXX object src/CMakeFiles/openbabel.dir/formats/dmolformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 27%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fchkformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 27%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fhiaimsformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 34 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 28%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gamessformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 28%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gaussformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 28%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gausscubeformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 29%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gausszmatformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 29%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gulpformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 29%] Building CXX object src/CMakeFiles/openbabel.dir/formats/hinformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 30%] Building CXX object src/CMakeFiles/openbabel.dir/formats/jaguarformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 5 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 30%] Building CXX object src/CMakeFiles/openbabel.dir/formats/molproformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 30%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mopacformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 31%] Building CXX object src/CMakeFiles/openbabel.dir/formats/nwchemformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 31%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pwscfformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 51 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 31%] Building CXX object src/CMakeFiles/openbabel.dir/formats/qchemformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 32%] Building CXX object src/CMakeFiles/openbabel.dir/formats/siestaformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 32%] Building CXX object src/CMakeFiles/openbabel.dir/formats/turbomoleformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/adfformat.cpp:795:18: warning: 'SetLimits' is deprecated: Use vector version instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 795 | t41Data->SetLimits( gd.startPoint, gd.xAxis, gd.yAxis, gd.zAxis ); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/griddata.h:111:5: note: 'SetLimits' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 111 | OB_DEPRECATED_MSG("Use vector version instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 32%] Building CXX object src/CMakeFiles/openbabel.dir/formats/vaspformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 33%] Building CXX object src/CMakeFiles/openbabel.dir/formats/xsfformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 33%] Building CXX object src/CMakeFiles/openbabel.dir/formats/zindoformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 33%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gamessukformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/gausscubeformat.cpp:589:9: warning: 'GetOriginVector' is deprecated: Use GetOriginVector() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 589 | gd->GetOriginVector(origin); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/griddata.h:88:5: note: 'GetOriginVector' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 88 | OB_DEPRECATED_MSG("Use GetOriginVector() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 34%] Building CXX object src/CMakeFiles/openbabel.dir/formats/orcaformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 34%] Building CXX object src/CMakeFiles/openbabel.dir/formats/APIInterface.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 34%] Building CXX object src/CMakeFiles/openbabel.dir/formats/CSRformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 35%] Building CXX object src/CMakeFiles/openbabel.dir/formats/PQSformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/nwchemformat.cpp:321:24: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 321 | quadrupole.Set(i[0], i[1], value); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/nwchemformat.cpp:322:24: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 322 | quadrupole.Set(i[1], i[0], value); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/nwchemformat.cpp:310:9: warning: add explicit braces to avoid dangling else [-Wdangling-else] Step #3 - "compile-libfuzzer-coverage-x86_64": 310 | else if (vs[0][0] == '2') Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 35%] Building CXX object src/CMakeFiles/openbabel.dir/formats/MCDLformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 35%] Building CXX object src/CMakeFiles/openbabel.dir/formats/alchemyformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 36%] Building CXX object src/CMakeFiles/openbabel.dir/formats/acrformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 36%] Building CXX object src/CMakeFiles/openbabel.dir/formats/amberformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 9 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 36%] Building CXX object src/CMakeFiles/openbabel.dir/formats/balstformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 37%] Building CXX object src/CMakeFiles/openbabel.dir/formats/bgfformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 37%] Building CXX object src/CMakeFiles/openbabel.dir/formats/boxformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 37%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cacaoformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 37%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cacheformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 38%] Building CXX object src/CMakeFiles/openbabel.dir/formats/carformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 38%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cccformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 38%] Building CXX object src/CMakeFiles/openbabel.dir/formats/chem3dformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 39%] Building CXX object src/CMakeFiles/openbabel.dir/formats/chemdrawcdx.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 39%] Building CXX object src/CMakeFiles/openbabel.dir/formats/chemdrawct.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 39%] Building CXX object src/CMakeFiles/openbabel.dir/formats/chemkinformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 40%] Building CXX object src/CMakeFiles/openbabel.dir/formats/chemtoolformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 40%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cifformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 40%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cofformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 41%] Building CXX object src/CMakeFiles/openbabel.dir/formats/crkformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 41%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cssrformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 41%] Building CXX object src/CMakeFiles/openbabel.dir/formats/dlpolyformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 42%] Building CXX object src/CMakeFiles/openbabel.dir/formats/exyzformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 42%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fastsearchformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 42%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fastaformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 43%] Building CXX object src/CMakeFiles/openbabel.dir/formats/featformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 43%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fhformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 43%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fingerprintformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 44%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fpsformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 44%] Building CXX object src/CMakeFiles/openbabel.dir/formats/freefracformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 3 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 44%] Building CXX object src/CMakeFiles/openbabel.dir/formats/ghemicalformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 45%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gromos96format.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 45%] Building CXX object src/CMakeFiles/openbabel.dir/formats/groformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 45%] Building CXX object src/CMakeFiles/openbabel.dir/formats/lmpdatformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 46%] Building CXX object src/CMakeFiles/openbabel.dir/formats/lpmdformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 46%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mdffformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 46%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mmcifformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/chemkinformat.cpp:917:12: warning: enumeration values 'ARRHENIUS' and 'THREEBODY' not handled in switch [-Wswitch] Step #3 - "compile-libfuzzer-coverage-x86_64": 917 | switch(pRD->ReactionType) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^~~~~~~~~~~~~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/chemkinformat.cpp:996:12: warning: enumeration values 'ARRHENIUS' and 'SRI' not handled in switch [-Wswitch] Step #3 - "compile-libfuzzer-coverage-x86_64": 996 | switch(pRD->ReactionType) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^~~~~~~~~~~~~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 47%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mmodformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 47%] Building CXX object src/CMakeFiles/openbabel.dir/formats/moldenformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 47%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mpdformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 48%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mpqcformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 48%] Building CXX object src/CMakeFiles/openbabel.dir/formats/msiformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 48%] Building CXX object src/CMakeFiles/openbabel.dir/formats/msmsformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 49%] Building CXX object src/CMakeFiles/openbabel.dir/formats/opendxformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 49%] Building CXX object src/CMakeFiles/openbabel.dir/formats/outformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 49%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pcmodelformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 50%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pdbqtformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 50%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pointcloudformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 50%] Building CXX object src/CMakeFiles/openbabel.dir/formats/posformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 51%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pqrformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 51%] Building CXX object src/CMakeFiles/openbabel.dir/formats/rinchiformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 51%] Building CXX object src/CMakeFiles/openbabel.dir/formats/rsmiformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 52%] Building CXX object src/CMakeFiles/openbabel.dir/formats/rxnformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/mdffformat.cpp:135:50: warning: variable 'path' is uninitialized when used within its own initialization [-Wuninitialized] Step #3 - "compile-libfuzzer-coverage-x86_64": 135 | string path = (found == string::npos) ? "" : path.substr(0, found); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~~~ ^~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 52%] Building CXX object src/CMakeFiles/openbabel.dir/formats/shelxformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 52%] Building CXX object src/CMakeFiles/openbabel.dir/formats/smileyformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 53%] Building CXX object src/CMakeFiles/openbabel.dir/formats/stlformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 53%] Building CXX object src/CMakeFiles/openbabel.dir/formats/thermoformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 53%] Building CXX object src/CMakeFiles/openbabel.dir/formats/tinkerformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 54%] Building CXX object src/CMakeFiles/openbabel.dir/formats/unichemformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/opendxformat.cpp:275:9: warning: 'GetOriginVector' is deprecated: Use GetOriginVector() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 275 | gd->GetOriginVector(origin); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/griddata.h:88:5: note: 'GetOriginVector' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 88 | OB_DEPRECATED_MSG("Use GetOriginVector() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 54%] Building CXX object src/CMakeFiles/openbabel.dir/formats/viewmolformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 54%] Building CXX object src/CMakeFiles/openbabel.dir/formats/wlnformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 55%] Building CXX object src/CMakeFiles/openbabel.dir/formats/xedformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 55%] Building CXX object src/CMakeFiles/openbabel.dir/formats/xyzformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 55%] Building CXX object src/CMakeFiles/openbabel.dir/formats/yasaraformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 56%] Building CXX object src/CMakeFiles/openbabel.dir/formats/genbankformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 2 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 56%] Building CXX object src/CMakeFiles/openbabel.dir/formats/xtcformat.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 56%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/cansmidescriptor.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 57%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/cmpdfilter.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 57%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/groupcontrib.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 57%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/filters.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/rinchiformat.cpp:147:40: warning: 'GetFirstAtom' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 147 | if (mol.NumAtoms() == 1 && mol.GetFirstAtom()->GetAtomicNum() == 0) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/mol.h:287:5: note: 'GetFirstAtom' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 287 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 57%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/inchidescriptor.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 58%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/smartsdescriptors.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 58%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprints/finger2.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/rxnformat.cpp:262:25: warning: 'GetFirstAtom' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 262 | OBAtom *atm = pmol->GetFirstAtom(); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/mol.h:287:5: note: 'GetFirstAtom' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 287 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 58%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprints/finger3.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 59%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprints/fingerecfp.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/smileyformat.cpp:158:15: warning: 58 enumeration values not handled in switch: 'NotChiral', 'TH1', 'TH2'... [-Wswitch] Step #3 - "compile-libfuzzer-coverage-x86_64": 158 | switch (chirality) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^~~~~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 59%] Building CXX object src/CMakeFiles/openbabel.dir/forcefields/forcefieldgaff.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 59%] Building CXX object src/CMakeFiles/openbabel.dir/forcefields/forcefieldghemical.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 60%] Building CXX object src/CMakeFiles/openbabel.dir/forcefields/forcefieldmmff94.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 60%] Building CXX object src/CMakeFiles/openbabel.dir/forcefields/forcefielduff.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 60%] Building CXX object src/CMakeFiles/openbabel.dir/ops/addfilename.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 61%] Building CXX object src/CMakeFiles/openbabel.dir/ops/addinindex.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/yasaraformat.cpp:571:7: warning: 'snprintf' will always be truncated; specified size is 4, but format string expands to at least 5 [-Wformat-truncation] Step #3 - "compile-libfuzzer-coverage-x86_64": 571 | snprintf(&buffer[12], 4, "%4d",res->GetNum()); } Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 61%] Building CXX object src/CMakeFiles/openbabel.dir/ops/addpolarh.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 61%] Building CXX object src/CMakeFiles/openbabel.dir/ops/addnonpolarh.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 62%] Building CXX object src/CMakeFiles/openbabel.dir/ops/canonical.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:703:24: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #3 - "compile-libfuzzer-coverage-x86_64": 703 | if (fabs(lf) > MAXABS) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~ ^~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #3 - "compile-libfuzzer-coverage-x86_64": 32 | #define MAXABS INT_MAX-2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~~~~~~^~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:716:24: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #3 - "compile-libfuzzer-coverage-x86_64": 716 | if (fabs(lf) > MAXABS) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~ ^~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #3 - "compile-libfuzzer-coverage-x86_64": 32 | #define MAXABS INT_MAX-2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~~~~~~^~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:729:24: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #3 - "compile-libfuzzer-coverage-x86_64": 729 | if (fabs(lf) > MAXABS) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~ ^~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #3 - "compile-libfuzzer-coverage-x86_64": 32 | #define MAXABS INT_MAX-2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~~~~~~^~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:755:50: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #3 - "compile-libfuzzer-coverage-x86_64": 755 | (float)maxint[2] - (float)minint[2] >= MAXABS) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~ ^~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #3 - "compile-libfuzzer-coverage-x86_64": 32 | #define MAXABS INT_MAX-2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~~~~~~^~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:754:50: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #3 - "compile-libfuzzer-coverage-x86_64": 754 | (float)maxint[1] - (float)minint[1] >= MAXABS || Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~ ^~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #3 - "compile-libfuzzer-coverage-x86_64": 32 | #define MAXABS INT_MAX-2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~~~~~~^~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:753:50: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #3 - "compile-libfuzzer-coverage-x86_64": 753 | if ((float)maxint[0] - (float)minint[0] >= MAXABS || Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~ ^~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #3 - "compile-libfuzzer-coverage-x86_64": 32 | #define MAXABS INT_MAX-2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~~~~~~^~ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 62%] Building CXX object src/CMakeFiles/openbabel.dir/ops/delpolarh.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 62%] Building CXX object src/CMakeFiles/openbabel.dir/ops/changecell.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 63%] Building CXX object src/CMakeFiles/openbabel.dir/ops/delnonpolarh.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 63%] Building CXX object src/CMakeFiles/openbabel.dir/ops/gen2D.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 63%] Building CXX object src/CMakeFiles/openbabel.dir/ops/fillUC.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 64%] Building CXX object src/CMakeFiles/openbabel.dir/ops/forcefield.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 64%] Building CXX object src/CMakeFiles/openbabel.dir/ops/gen3d.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 64%] Building CXX object src/CMakeFiles/openbabel.dir/ops/largest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 65%] Building CXX object src/CMakeFiles/openbabel.dir/ops/loader.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 65%] Building CXX object src/CMakeFiles/openbabel.dir/ops/neutralize.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 65%] Building CXX object src/CMakeFiles/openbabel.dir/ops/opsplit.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 66%] Building CXX object src/CMakeFiles/openbabel.dir/ops/optransform.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": In file included from /src/openbabel/src/descriptors/inchidescriptor.cpp:24: Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/inchiformat.h:148:50: warning: while loop has empty body [-Wempty-body] Step #3 - "compile-libfuzzer-coverage-x86_64": 148 | while(p1!=s1.end() && isdigit(*p1++)); --p1; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/inchiformat.h:148:50: note: put the semicolon on a separate line to silence this warning Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/inchiformat.h:153:50: warning: while loop has empty body [-Wempty-body] Step #3 - "compile-libfuzzer-coverage-x86_64": 153 | while(p2!=s2.end() && isdigit(*p2++)); --p2; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/inchiformat.h:153:50: note: put the semicolon on a separate line to silence this warning Step #3 - "compile-libfuzzer-coverage-x86_64": [ 66%] Building CXX object src/CMakeFiles/openbabel.dir/ops/partialcharges.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 66%] Building CXX object src/CMakeFiles/openbabel.dir/ops/readconformers.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 67%] Building CXX object src/CMakeFiles/openbabel.dir/ops/sort.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 2 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": 6 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 67%] Building CXX object src/CMakeFiles/openbabel.dir/ops/opisomorph.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 67%] Building CXX object src/CMakeFiles/openbabel.dir/ops/ophighlight.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefields/forcefieldgaff.cpp:441:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 441 | if (IsNearZero(rab, 1.0e-3)) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 68%] Building CXX object src/CMakeFiles/openbabel.dir/ops/xout.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefields/forcefieldghemical.cpp:344:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 344 | if (IsNearZero(rab, 1.0e-3)) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefields/forcefielduff.cpp:269:11: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 269 | if (IsNearZero(dotAbbcBccd) || !isfinite(tor)) { // stop any NaN or infinity Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefields/forcefielduff.cpp:515:27: warning: 'VectorLengthDerivative' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 515 | rab = OBForceField::VectorLengthDerivative(da, db); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/forcefield.h:1523:5: note: 'VectorLengthDerivative' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 1523 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefields/forcefielduff.cpp:519:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 519 | if (IsNearZero(rab, 1.0e-3)) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/forcefields/forcefielduff.cpp:1325:11: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 1325 | if (IsNearZero(torsioncalc.V)) // don't bother calcuating this torsion Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 68%] Building CXX object src/CMakeFiles/openbabel.dir/charges/eem.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 68%] Building CXX object src/CMakeFiles/openbabel.dir/charges/gasteiger.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 69%] Building CXX object src/CMakeFiles/openbabel.dir/charges/none.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 69%] Building CXX object src/CMakeFiles/openbabel.dir/charges/mmff94.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 69%] Building CXX object src/CMakeFiles/openbabel.dir/charges/fromfile.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 70%] Building CXX object src/CMakeFiles/openbabel.dir/depict/depict.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 70%] Building CXX object src/CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 70%] Building CXX object src/CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/ops/gen3d.cpp:169:12: warning: 'UpdateCoordinates' is deprecated: Use GetCooordinates instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 169 | pFF->UpdateCoordinates(molCopy); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/forcefield.h:713:5: note: 'UpdateCoordinates' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 713 | OB_DEPRECATED_MSG("Use GetCooordinates instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/ops/gen3d.cpp:187:10: warning: 'UpdateCoordinates' is deprecated: Use GetCooordinates instead. [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 187 | pFF->UpdateCoordinates(molCopy); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/forcefield.h:713:5: note: 'UpdateCoordinates' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 713 | OB_DEPRECATED_MSG("Use GetCooordinates instead.") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 71%] Building CXX object src/CMakeFiles/openbabel.dir/math/spacegroup.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 71%] Building CXX object src/CMakeFiles/openbabel.dir/math/transform3d.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 71%] Building CXX object src/CMakeFiles/openbabel.dir/math/vector3.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 72%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/stereo.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 72%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 72%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 2 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 73%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 73%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 73%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 74%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 74%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/facade.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 74%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/math/matrix3x3.cpp:273:19: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | vv.SetX(x()*m.Get(0,0) + y()*m.Get(0,1) + z()*m.Get(0,2)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/math/matrix3x3.cpp:273:36: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | vv.SetX(x()*m.Get(0,0) + y()*m.Get(0,1) + z()*m.Get(0,2)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/math/matrix3x3.cpp:273:53: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 273 | vv.SetX(x()*m.Get(0,0) + y()*m.Get(0,1) + z()*m.Get(0,2)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/math/matrix3x3.cpp:274:19: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 274 | vv.SetY(x()*m.Get(1,0) + y()*m.Get(1,1) + z()*m.Get(1,2)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/math/matrix3x3.cpp:274:36: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 274 | vv.SetY(x()*m.Get(1,0) + y()*m.Get(1,1) + z()*m.Get(1,2)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/math/matrix3x3.cpp:274:53: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 274 | vv.SetY(x()*m.Get(1,0) + y()*m.Get(1,1) + z()*m.Get(1,2)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/math/matrix3x3.cpp:275:19: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 275 | vv.SetZ(x()*m.Get(2,0) + y()*m.Get(2,1) + z()*m.Get(2,2)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/math/matrix3x3.cpp:275:36: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 275 | vv.SetZ(x()*m.Get(2,0) + y()*m.Get(2,1) + z()*m.Get(2,2)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/math/matrix3x3.cpp:275:53: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 275 | vv.SetZ(x()*m.Get(2,0) + y()*m.Get(2,1) + z()*m.Get(2,2)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": 9 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/charges/fromfile.cpp:114:30: warning: object backing the pointer 'name' will be destroyed at the end of the full-expression [-Wdangling-assignment-gsl] Step #3 - "compile-libfuzzer-coverage-x86_64": 114 | char *f = name = (char*)res->GetAtomID( a ).c_str(); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^~~~~~~~~~~~~~~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/depict/depict.cpp:1237:99: warning: expression does not compute the number of elements in this array; element type is 'const float', not 'double' [-Wsizeof-array-div] Step #3 - "compile-libfuzzer-coverage-x86_64": 1237 | static const vector<double> pat = vector<double>(dashpattern,dashpattern + sizeof(dashpattern)/sizeof(double)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ~~~~~~~~~~~ ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/depict/depict.cpp:1236:24: note: array 'dashpattern' declared here Step #3 - "compile-libfuzzer-coverage-x86_64": 1236 | static const float dashpattern[] = {5., 5.}; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/depict/depict.cpp:1237:99: note: place parentheses around the 'sizeof(double)' expression to silence this warning Step #3 - "compile-libfuzzer-coverage-x86_64": 1237 | static const vector<double> pat = vector<double>(dashpattern,dashpattern + sizeof(dashpattern)/sizeof(double)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/stereo/perception.cpp:2401:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2401 | if (IsNearZero(v1.length(), 1.0e-3) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/src/stereo/perception.cpp:2402:10: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 2402 | || IsNearZero(v2.length(), 1.0e-3)) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:198:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 198 | OB_DEPRECATED Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #3 - "compile-libfuzzer-coverage-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": 4 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": 2 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 75%] Linking CXX static library libopenbabel.a Step #3 - "compile-libfuzzer-coverage-x86_64": [ 75%] Built target openbabel Step #3 - "compile-libfuzzer-coverage-x86_64": [ 76%] Building CXX object tools/CMakeFiles/obabel.dir/obabel.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 76%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 76%] Building CXX object test/CMakeFiles/fuzz_obconversion_smiles.dir/fuzz/fuzz_obconversion.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 76%] Building CXX object test/CMakeFiles/fuzz_obconversion_sdf.dir/fuzz/fuzz_obconversion.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 77%] Building CXX object test/CMakeFiles/fuzz_convert.dir/fuzz/fuzz_convert.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 78%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 78%] Building CXX object test/CMakeFiles/test_runner.dir/automorphismtest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 78%] Building CXX object test/CMakeFiles/test_runner.dir/aliastest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 79%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 79%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 79%] Building CXX object test/CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 79%] Building CXX object test/CMakeFiles/test_runner.dir/canonstabletest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 80%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 80%] Building CXX object test/CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 80%] Building CXX object test/CMakeFiles/test_runner.dir/cistranstest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 81%] Building CXX object test/CMakeFiles/test_runner.dir/conversiontest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 81%] Building CXX object test/CMakeFiles/test_runner.dir/fuzzregresstest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 81%] Building CXX object test/CMakeFiles/test_runner.dir/addhtest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 81%] Building CXX object test/CMakeFiles/test_runner.dir/graphsymtest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 81%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 82%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 83%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 83%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 83%] Building CXX object test/CMakeFiles/test_runner.dir/multicmltest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 84%] Building CXX object test/CMakeFiles/test_runner.dir/periodictest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 84%] Building CXX object test/CMakeFiles/test_runner.dir/regressionstest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 84%] Building CXX object test/CMakeFiles/test_runner.dir/rotortest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/shuffletest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/smilestest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/spectrophoretest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/squareplanartest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/stereotest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/rotortest.cpp:96:13: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 96 | OB_ASSERT(IsNear(RAD_TO_DEG * rotor.CalcTorsion(mol->GetCoordinates()), 60.0, 1.0)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/rotortest.cpp:134:13: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 134 | OB_ASSERT(IsNear(RAD_TO_DEG * rotor.CalcTorsion(mol->GetCoordinates()), 0.0, 1.0)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[de/src/openbabel/test/stereotest.cpp:102:13:precated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": warning: 5 enumeration values not handled in switch: 'ExtendedCisTrans', 'SquarePlanar', 'ExtendedTetrahedral'... [-Wswitch] Step #3 - "compile-libfuzzer-coverage-x86_64": 102 | switch/src/openbabel/test/rotortest.cpp (u:140:13: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": n 140 | OB_ASSERT(IsNear(RiAtD_TO_DEGs * rotor.CalcTorsion(mol->GetCoordinates())., 0.0, 1.0));  Step #3 - "compile-libfuzzer-coverage-x86_64": a t(i).ty|  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": pe) 190 | O B_{DEPRECATED_M Step #3 - "compile-libfuzzer-coverage-x86_64": SG("Use Is| Ap ^~~~~~~~~~~~~~~~prox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:111:12: warning: null passed to a callee that requires a non-null argument [-Wnonnull] Step #3 - "compile-libfuzzer-coverage-x86_64": 111 | return nullptr; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^~~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/stereotest.cpp:132:13: warning: 5 enumeration values not handled in switch: 'ExtendedCisTrans', 'SquarePlanar', 'ExtendedTetrahedral'... [-Wswitch] Step #3 - "compile-libfuzzer-coverage-x86_64": 132 | switch (units.at(i).type) { Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^~~~~~~~~~~~~~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 87%] Linking CXX executable ../bin/fuzz_obconversion_sdf Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:255:21: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #3 - "compile-libfuzzer-coverage-x86_64": 255 | // / \  Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:270:21: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #3 - "compile-libfuzzer-coverage-x86_64": 270 | // / \  Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:285:16: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #3 - "compile-libfuzzer-coverage-x86_64": 285 | // \  Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:287:21: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #3 - "compile-libfuzzer-coverage-x86_64": 287 | // \  Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:310:21: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #3 - "compile-libfuzzer-coverage-x86_64": 310 | // \  Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:432:10: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #3 - "compile-libfuzzer-coverage-x86_64": 432 | // \  Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": [ 87%] Linking CXX executable ../bin/fuzz_obconversion_smiles Step #3 - "compile-libfuzzer-coverage-x86_64": [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/tautomertest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/tetraplanartest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/uniqueidtest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 89%] Linking CXX executable ../bin/roundtrip Step #3 - "compile-libfuzzer-coverage-x86_64": [ 89%] Linking CXX executable ../bin/obabel Step #3 - "compile-libfuzzer-coverage-x86_64": [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/aromatest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/atom.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 90%] Linking CXX executable ../bin/fuzz_convert Step #3 - "compile-libfuzzer-coverage-x86_64": [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/bond.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/cansmi.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/charge_mmff94.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/conversion.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/datatest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/ffgaff.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 3 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/ffghemical.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/ffmmff94.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/ffuff.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/format.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 7 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/formula.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": 2 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmiles.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/iterators.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/math.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/mol.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 96%] Built target fuzz_obconversion_sdf Step #3 - "compile-libfuzzer-coverage-x86_64": [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/pdbreadfile.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/phmodel.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 97%] Built target fuzz_obconversion_smiles Step #3 - "compile-libfuzzer-coverage-x86_64": [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/residue.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/ringtest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 98%] Built target roundtrip Step #3 - "compile-libfuzzer-coverage-x86_64": [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 98%] Built target obabel Step #3 - "compile-libfuzzer-coverage-x86_64": [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/smartsparse.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/unitcell.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": [ 99%] Built target fuzz_convert Step #3 - "compile-libfuzzer-coverage-x86_64": [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/obtest.cpp.o Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:190:14: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | x = m2.Get( i, j ); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:201:10: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 201 | m3.Set(i,j, m2(i,j) ); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:325:16: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 325 | Diagonal.Set(i, j, 0.0); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:326:12: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 326 | Diagonal.Set(0, 0, randomizer.NextFloat()); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:327:12: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 327 | Diagonal.Set(1, 1, Diagonal.Get(0,0)+fabs(randomizer.NextFloat())); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:327:31: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 327 | Diagonal.Set(1, 1, Diagonal.Get(0,0)+fabs(randomizer.NextFloat())); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:328:12: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 328 | Diagonal.Set(2, 2, Diagonal.Get(1,1)+fabs(randomizer.NextFloat())); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:328:31: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 328 | Diagonal.Set(2, 2, Diagonal.Get(1,1)+fabs(randomizer.NextFloat())); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:346:51: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 346 | VERIFY( IsNegligible( eigenvals[j] - Diagonal.Get(j,j), Diagonal.Get(2,2) ) ); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:346:70: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 346 | VERIFY( IsNegligible( eigenvals[j] - Diagonal.Get(j,j), Diagonal.Get(2,2) ) ); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:360:7: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 360 | rnd.Set(0,1, rnd.Get(1,0)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:360:20: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 360 | rnd.Set(0,1, rnd.Get(1,0)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:361:7: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 361 | rnd.Set(0,2, rnd.Get(2,0)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:361:20: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 361 | rnd.Set(0,2, rnd.Get(2,0)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:362:7: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 362 | rnd.Set(1,2, rnd.Get(2,1)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:362:20: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 362 | rnd.Set(1,2, rnd.Get(2,1)); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/math.cpp:376:39: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 376 | VERIFY( compare( shouldBeDiagonal.Get(j,j), eigenvals[j] ) ); Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/logp_psa.cpp:78:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 78 | if (IsNear(logP , 1.4008)) { // value from JOELib2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/logp_psa.cpp:85:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 85 | if (IsNear(psa , 29.46)) { // value from JOELib2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/logp_psa.cpp:95:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 95 | if (IsNear(logP, 2.5815)) { // Value from JOELib2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/logp_psa.cpp:102:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 102 | if (IsNear(psa, 0.0)) { // Value from JOELib2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/logp_psa.cpp:112:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 112 | if (IsNear(logP, 2.0264)) { // JOELib2 = 1.9534, more H added on N Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/logp_psa.cpp:119:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 119 | if (IsNear(psa, 29.1)) { // Value from JOELib2 Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": 6 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": 17 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:125:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 125 | if ( IsNear(a, atof(vs[0].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:129:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 129 | if ( IsNear(b, atof(vs[1].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:133:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 133 | if ( IsNear(c, atof(vs[2].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:138:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 138 | if ( IsNear(alpha, atof(vs[3].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:142:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 142 | if ( IsNear(beta, atof(vs[4].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:146:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 146 | if ( IsNear(gamma, atof(vs[5].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:155:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 155 | if ( IsNear(a, cell2.GetA(), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:159:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 159 | if ( IsNear(b, cell2.GetB(), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:163:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 163 | if ( IsNear(c, cell2.GetC(), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:168:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 168 | if ( IsNear(alpha, cell2.GetAlpha(), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:172:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 172 | if ( IsNear(beta, cell2.GetBeta(), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:176:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 176 | if ( IsNear(gamma, cell2.GetGamma(), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:208:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 208 | if ( IsNear(tmpcoords[0], atof(vs[0].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:212:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 212 | if ( IsNear(tmpcoords[1], atof(vs[1].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:216:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 216 | if ( IsNear(tmpcoords[2], atof(vs[2].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:232:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 232 | if ( IsNear(tmpcoords[0], atof(vs[0].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:236:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 236 | if ( IsNear(tmpcoords[1], atof(vs[1].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:240:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 240 | if ( IsNear(tmpcoords[2], atof(vs[2].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:256:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 256 | if ( IsNear(tmpcoords[0], atof(vs[0].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:260:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 260 | if ( IsNear(tmpcoords[1], atof(vs[1].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:264:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 264 | if ( IsNear(tmpcoords[2], atof(vs[2].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:280:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 280 | if ( IsNear(tmpcoords[0], atof(vs[0].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:284:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 284 | if ( IsNear(tmpcoords[1], atof(vs[1].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/test/unitcell.cpp:288:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #3 - "compile-libfuzzer-coverage-x86_64": 288 | if ( IsNear(tmpcoords[2], atof(vs[2].c_str()), 1.0e-3) ) Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/include/openbabel/obutil.h:190:3: note: 'IsNear' has been explicitly marked deprecated here Step #3 - "compile-libfuzzer-coverage-x86_64": 190 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #3 - "compile-libfuzzer-coverage-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^ Step #3 - "compile-libfuzzer-coverage-x86_64": 24 warnings generated. Step #3 - "compile-libfuzzer-coverage-x86_64": [100%] Linking CXX executable ../bin/test_runner Step #3 - "compile-libfuzzer-coverage-x86_64": [100%] Built target test_runner Step #3 - "compile-libfuzzer-coverage-x86_64": + cp bin/fuzz_convert bin/fuzz_obconversion_sdf bin/fuzz_obconversion_smiles /workspace/out/libfuzzer-coverage-x86_64/ Finished Step #3 - "compile-libfuzzer-coverage-x86_64" Starting Step #4 Step #4: Pulling image: gcr.io/oss-fuzz-base/base-runner Step #4: Using default tag: latest Step #4: latest: Pulling from oss-fuzz-base/base-runner Step #4: b549f31133a9: Already exists Step #4: 1307789363dd: Already exists Step #4: 556626353af3: Already exists Step #4: db9ed529e8fb: Pulling fs layer Step #4: ba13770b7eaa: Pulling fs layer Step #4: 70770e2c0e63: Pulling fs layer Step #4: 8d2fd1823e4f: Pulling fs layer Step #4: a8145581773a: Pulling fs layer Step #4: 6ae7bd43ebf8: Pulling fs layer Step #4: a53b2f327853: Pulling fs layer Step #4: 6efd4ba968f2: Pulling fs layer Step #4: 0e1a2e880e7b: Pulling fs layer Step #4: 3ba3fbfe0387: Pulling fs layer Step #4: 167e7e6327be: Pulling fs layer Step #4: 904637a5c5ea: Pulling fs layer Step #4: 7908046762d1: Pulling fs layer Step #4: 904438e45919: Pulling fs layer Step #4: 135fd21c1815: Pulling fs layer Step #4: 1ce0fb04338c: Pulling fs layer Step #4: d196ffa7dbf7: Pulling fs layer Step #4: b4c1adc86727: Pulling fs layer Step #4: 16e463695e3f: Pulling fs layer Step #4: 77710914d73c: Pulling fs layer Step #4: 7403747af90d: Pulling fs layer Step #4: 19a882e4bf21: Pulling fs layer Step #4: c9cd6debb621: Pulling fs layer Step #4: 56bc13acc5ac: Pulling fs layer Step #4: 75349c4a1939: Pulling fs layer Step #4: 135fd21c1815: Waiting Step #4: 7403747af90d: Waiting Step #4: 3ba3fbfe0387: Waiting Step #4: 1ce0fb04338c: Waiting Step #4: d196ffa7dbf7: Waiting Step #4: 167e7e6327be: Waiting Step #4: b4c1adc86727: Waiting Step #4: 19a882e4bf21: Waiting Step #4: 904637a5c5ea: Waiting Step #4: c9cd6debb621: Waiting Step #4: 56bc13acc5ac: Waiting Step #4: 7908046762d1: Waiting Step #4: 75349c4a1939: Waiting Step #4: 904438e45919: Waiting Step #4: 77710914d73c: Waiting Step #4: 16e463695e3f: Waiting Step #4: a53b2f327853: Waiting Step #4: 0e1a2e880e7b: Waiting Step #4: 70770e2c0e63: Verifying Checksum Step #4: 70770e2c0e63: Download complete Step #4: a8145581773a: Verifying Checksum Step #4: a8145581773a: Download complete Step #4: db9ed529e8fb: Verifying Checksum Step #4: db9ed529e8fb: Download complete Step #4: ba13770b7eaa: Verifying Checksum Step #4: ba13770b7eaa: Download complete Step #4: 8d2fd1823e4f: Verifying Checksum Step #4: 8d2fd1823e4f: Download complete Step #4: a53b2f327853: Verifying Checksum Step #4: a53b2f327853: Download complete Step #4: 6efd4ba968f2: Download complete Step #4: db9ed529e8fb: Pull complete Step #4: 0e1a2e880e7b: Verifying Checksum Step #4: 0e1a2e880e7b: Download complete Step #4: 904637a5c5ea: Download complete Step #4: 7908046762d1: Verifying Checksum Step #4: 7908046762d1: Download complete Step #4: 167e7e6327be: Verifying Checksum Step #4: 167e7e6327be: Download complete Step #4: ba13770b7eaa: Pull complete Step #4: 135fd21c1815: Verifying Checksum Step #4: 135fd21c1815: Download complete Step #4: 6ae7bd43ebf8: Verifying Checksum Step #4: 6ae7bd43ebf8: Download complete Step #4: 70770e2c0e63: Pull complete Step #4: d196ffa7dbf7: Verifying Checksum Step #4: d196ffa7dbf7: Download complete Step #4: b4c1adc86727: Download complete Step #4: 8d2fd1823e4f: Pull complete Step #4: 7403747af90d: Verifying Checksum Step #4: 7403747af90d: Download complete Step #4: 3ba3fbfe0387: Verifying Checksum Step #4: 3ba3fbfe0387: Download complete Step #4: a8145581773a: Pull complete Step #4: 77710914d73c: Download complete Step #4: c9cd6debb621: Verifying Checksum Step #4: c9cd6debb621: Download complete Step #4: 19a882e4bf21: Verifying Checksum Step #4: 19a882e4bf21: Download complete Step #4: 75349c4a1939: Verifying Checksum Step #4: 75349c4a1939: Download complete Step #4: 904438e45919: Verifying Checksum Step #4: 904438e45919: Download complete Step #4: 16e463695e3f: Verifying Checksum Step #4: 16e463695e3f: Download complete Step #4: 56bc13acc5ac: Verifying Checksum Step #4: 56bc13acc5ac: Download complete Step #4: 1ce0fb04338c: Verifying Checksum Step #4: 1ce0fb04338c: Download complete Step #4: 6ae7bd43ebf8: Pull complete Step #4: a53b2f327853: Pull complete Step #4: 6efd4ba968f2: Pull complete Step #4: 0e1a2e880e7b: Pull complete Step #4: 3ba3fbfe0387: Pull complete Step #4: 167e7e6327be: Pull complete Step #4: 904637a5c5ea: Pull complete Step #4: 7908046762d1: Pull complete Step #4: 904438e45919: Pull complete Step #4: 135fd21c1815: Pull complete Step #4: 1ce0fb04338c: Pull complete Step #4: d196ffa7dbf7: Pull complete Step #4: b4c1adc86727: Pull complete Step #4: 16e463695e3f: Pull complete Step #4: 77710914d73c: Pull complete Step #4: 7403747af90d: Pull complete Step #4: 19a882e4bf21: Pull complete Step #4: c9cd6debb621: Pull complete Step #4: 56bc13acc5ac: Pull complete Step #4: 75349c4a1939: Pull complete Step #4: Digest: sha256:7303c35263e461a648334e2ad2f5865f892cd1745aa489be3531814a7b9c25ab Step #4: Status: Downloaded newer image for gcr.io/oss-fuzz-base/base-runner:latest Step #4: gcr.io/oss-fuzz-base/base-runner:latest Finished Step #4 Starting Step #5 Step #5: Already have image (with digest): gcr.io/oss-fuzz-base/base-runner Step #5: Running fuzz_obconversion_sdf Step #5: Running fuzz_obconversion_smiles Step #5: Running fuzz_convert Step #5: [2026-05-12 06:50:59,630 INFO] Finding shared libraries for targets (if any). Step #5: [2026-05-12 06:50:59,639 INFO] Finished finding shared libraries for targets. Step #5: Coverage error, creating log file: /workspace/out/libfuzzer-coverage-x86_64/fuzzer_stats/fuzz_obconversion_sdf_error.log Step #5: [2026-05-12 06:51:31,282 INFO] Finding shared libraries for targets (if any). Step #5: [2026-05-12 06:51:31,291 INFO] Finished finding shared libraries for targets. Step #5: Coverage error, creating log file: /workspace/out/libfuzzer-coverage-x86_64/fuzzer_stats/fuzz_obconversion_smiles_error.log Step #5: Error occured while running fuzz_convert: Step #5: Cov returncode: 0, grep returncode: 0 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1216792131 Step #5: MERGE-OUTER: 11081 files, 0 in the initial corpus, 0 processed earlier Step #5: MERGE-OUTER: attempt 1 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1216832225 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: 11081 total files; 0 processed earlier; will process 11081 files now Step #5: #1 pulse exec/s: 0 rss: 32Mb Step #5: #2 pulse exec/s: 0 rss: 32Mb Step #5: #4 pulse exec/s: 0 rss: 32Mb Step #5: HIER Step #5: Not a valid input formatHIER Step #5: Not a valid input format#8 pulse exec/s: 0 rss: 32Mb Step #5: HIER Step #5: Not a valid input format#16 pulse exec/s: 0 rss: 32Mb Step #5: HIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatNot a valid input format#32 pulse exec/s: 0 rss: 33Mb Step #5: Step #5: Step #5: Not a valid input formatNot a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input format#64 pulse exec/s: 0 rss: 33Mb Step #5: HIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatlibc++abi: terminating Step #5: ==70== ERROR: libFuzzer: deadly signal Step #5: #0 0x558b54388ee4 in __sanitizer_print_stack_trace /src/llvm-project/compiler-rt/lib/ubsan/ubsan_diag_standalone.cpp:31:3 Step #5: #1 0x558b542fd468 in fuzzer::PrintStackTrace() /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerUtil.cpp:210:5 Step #5: #2 0x558b542dffb5 in fuzzer::Fuzzer::CrashCallback() /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:231:3 Step #5: #3 0x7f973feec41f (/lib/x86_64-linux-gnu/libpthread.so.0+0x1441f) (BuildId: 9753720502573b97dbac595b61fd72c2df18e078) Step #5: #4 0x7f973fce600a in raise (/lib/x86_64-linux-gnu/libc.so.6+0x4300a) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #5 0x7f973fcc5858 in abort (/lib/x86_64-linux-gnu/libc.so.6+0x22858) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #6 0x558b542b45c5 in __abort_message (out/libfuzzer-coverage-x86_64/fuzz_convert+0x4a5c5) Step #5: #7 0x558b547402c8 in demangling_terminate_handler() cxa_default_handlers.cpp Step #5: #8 0x558b546dbd42 in std::__terminate(void (*)()) (out/libfuzzer-coverage-x86_64/fuzz_convert+0x471d42) Step #5: #9 0x558b546dbce1 in std::terminate() (out/libfuzzer-coverage-x86_64/fuzz_convert+0x471ce1) Step #5: #10 0x558b546ddb79 in __cxa_rethrow (out/libfuzzer-coverage-x86_64/fuzz_convert+0x473b79) Step #5: #11 0x558b5446a812 in OpenBabel::CDXReader::CDXReader(std::__1::basic_istream>&) /src/openbabel/src/formats/chemdrawcdx.cpp:744:5 Step #5: #12 0x558b54466a58 in OpenBabel::ChemDrawBinaryXFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/chemdrawcdx.cpp:219:13 Step #5: #13 0x558b546d023b in OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:101:18 Step #5: #14 0x558b5438e564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #15 0x558b5438e0d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #16 0x558b54389565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #17 0x558b542e169d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #18 0x558b542eac38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #19 0x558b542d2139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #20 0x558b542fde12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #21 0x7f973fcc7082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #22 0x558b542c54fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: __sanitizer_print_stack_trace--fuzzer::PrintStackTrace()--fuzzer::Fuzzer::CrashCallback() Step #5: NOTE: libFuzzer has rudimentary signal handlers. Step #5: Combine libFuzzer with AddressSanitizer or similar for better crash reports. Step #5: SUMMARY: libFuzzer: deadly signal Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0xbe, Step #5: \276 Step #5: artifact_prefix='./'; Test unit written to ./crash-b7471e724dfba20b71265eb8f8315ff5add6ccad Step #5: Base64: vg== Step #5: MERGE-OUTER: attempt 2 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1216889848 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/b7471e724dfba20b71265eb8f8315ff5add6ccad' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 74 processed earlier; will process 11007 files now Step #5: #1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 33Mb Step #5: HIER Step #5: Not a valid input format#4 pulse exec/s: 0 rss: 33Mb Step #5: HIER Step #5: Not a valid input formatHIER Step #5: Not a valid input format#8 pulse exec/s: 0 rss: 33Mb Step #5: Not a valid input format#16 pulse exec/s: 0 rss: 33Mb Step #5: HIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input format#32 pulse exec/s: 0 rss: 33Mb Step #5: HIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input format#64 pulse exec/s: 0 rss: 33Mb Step #5: HIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatNot a valid input formatNot a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatNot a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input format#128 pulse exec/s: 0 rss: 33Mb Step #5: HIER Step #5: Not a valid input format Step #5: Step #5: HIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatNot a valid input formatHIER Step #5: Not a valid input formatHIER Step #5: Not a valid input formatUndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==74==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000000 (pc 0x56353a9b770f bp 0x7ffc50075ea0 sp 0x7ffc50075d50 T74) Step #5: ==74==The signal is caused by a READ memory access. Step #5: ==74==Hint: address points to the zero page. Step #5: #0 0x56353a9b770f in __is_long /usr/local/bin/../include/c++/v1/string:2099:12 Step #5: #1 0x56353a9b770f in __get_pointer /usr/local/bin/../include/c++/v1/string:2240:12 Step #5: #2 0x56353a9b770f in data /usr/local/bin/../include/c++/v1/string:1767:30 Step #5: #3 0x56353a9b770f in c_str /usr/local/bin/../include/c++/v1/string:1765:106 Step #5: #4 0x56353a9b770f in OpenBabel::ChemKinFormat::ReadHeader(std::__1::basic_istream>&, OpenBabel::OBConversion*) /src/openbabel/src/formats/chemkinformat.cpp:272:44 Step #5: #5 0x56353a9b7428 in OpenBabel::ChemKinFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/chemkinformat.cpp:197:9 Step #5: #6 0x56353a9bfd2b in OpenBabel::ChemKinFormat::ReadChemObject(OpenBabel::OBConversion*) /src/openbabel/src/formats/chemkinformat.cpp:123:14 Step #5: #7 0x56353a8d9564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #8 0x56353a8d90d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #9 0x56353a8d4565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #10 0x56353a82c69d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #11 0x56353a835c38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #12 0x56353a81d139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #13 0x56353a848e12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #14 0x7f801614d082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #15 0x56353a8104fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: __is_long--__get_pointer--data Step #5: ==74==Register values: Step #5: rax = 0x000056353b9642c8 rbx = 0x0000000000000001 rcx = 0x000000000000000b rdx = 0x000056353b9642f8 Step #5: rdi = 0x000056353acc9d4b rsi = 0xffffffffffffffff rbp = 0x00007ffc50075ea0 rsp = 0x00007ffc50075d50 Step #5: r8 = 0x0000000000000000 r9 = 0x00007ffc50075dd0 r10 = 0x0000000000000001 r11 = 0x000056353c30c7ab Step #5: r12 = 0x000056353c2c11c0 r13 = 0x000000000000000e r14 = 0x0000000000000000 r15 = 0x00007ffc50076080 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV /src/openbabel/src/formats/chemkinformat.cpp:272:44 in OpenBabel::ChemKinFormat::ReadHeader(std::__1::basic_istream>&, OpenBabel::OBConversion*) Step #5: ==74==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0x2f,0x20,0x21, Step #5: / ! Step #5: artifact_prefix='./'; Test unit written to ./crash-ee4eb0aa704b0fad7b2f5a9c5472e8fb48941e98 Step #5: Base64: LyAh Step #5: MERGE-OUTER: attempt 3 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1216963025 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/ee4eb0aa704b0fad7b2f5a9c5472e8fb48941e98' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 272 processed earlier; will process 10809 files now Step #5: #1 pulse exec/s: 0 rss: 32Mb Step #5: #2 pulse exec/s: 0 rss: 33Mb Step #5: #4 pulse exec/s: 0 rss: 33Mb Step #5: #8 pulse exec/s: 0 rss: 34Mb Step #5: #16 pulse exec/s: 0 rss: 34Mb Step #5: Not a valid output format#32 pulse exec/s: 0 rss: 36Mb Step #5: This will prepare an index of and may take some time...#64 pulse exec/s: 0 rss: 36Mb Step #5: Step #5: Step #5: #128 pulse exec/s: 0 rss: 36Mb Step #5: #256 pulse exec/s: 0 rss: 167Mb Step #5: Not a valid output formatHIER Step #5: Not a valid input formatNot a valid output formatNot a valid output formatNot a valid output format#512 pulse exec/s: 0 rss: 167Mb Step #5: Not a valid output formatNot a valid output formatNot a valid input formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output format Step #5: Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output format Step #5: Step #5: #1024 pulse exec/s: 1024 rss: 262Mb Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Not a valid output formatTen recursion levels exceeded. Step #5: Not a valid output formatThis will prepare an index of and may take some time...Not a valid output formatNot a valid input formatHIER Step #5: Not a valid input formatNot a valid output formatUndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==78==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000200000000 (pc 0x7ffa8268097f bp 0x7ffd8ae21840 sp 0x7ffd8ae1a688 T78) Step #5: ==78==The signal is caused by a WRITE memory access. Step #5: #0 0x7ffa8268097f (/lib/x86_64-linux-gnu/libc.so.6+0x18b97f) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #1 0x564689157492 in std::__1::basic_string, std::__1::allocator>::__assign_external(char const*, unsigned long) (out/libfuzzer-coverage-x86_64/fuzz_convert+0x48a492) Step #5: #2 0x564688eae0de in operator= /usr/local/bin/../include/c++/v1/string:1231:12 Step #5: #3 0x564688eae0de in OpenBabel::MCDLFormat::getMCDL(OpenBabel::OBMol*, bool) /src/openbabel/src/formats/MCDLformat.cpp:575:15 Step #5: #4 0x564688ebf38e in OpenBabel::MCDLFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/MCDLformat.cpp:1539:10 Step #5: #5 0x564689133d01 in OpenBabel::OBMoleculeFormat::WriteChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:173:26 Step #5: #6 0x564688df1764 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:604:40 Step #5: #7 0x564688df10d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #8 0x564688dec565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #9 0x564688d4469d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #10 0x564688d4dc38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #11 0x564688d35139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #12 0x564688d60e12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #13 0x7ffa82519082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #14 0x564688d284fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: std::__1::basic_string, std::__1::allocator>::__assign_external(char const*, unsigned long)--operator= Step #5: ==78==Register values: Step #5: rax = 0x0000000200000000 rbx = 0x0000000000000001 rcx = 0x000000000000004f rdx = 0x0000000000000001 Step #5: rdi = 0x0000000200000000 rsi = 0x00005646891d5071 rbp = 0x00007ffd8ae21840 rsp = 0x00007ffd8ae1a688 Step #5: r8 = 0xffffffffffffffff r9 = 0x000000000026545f r10 = 0x000000000033f08d r11 = 0x00000000005d2da7 Step #5: r12 = 0x0000000200000000 r13 = 0x00000000000000c8 r14 = 0x00007ffd8ae207b0 r15 = 0xffffffffffffffff Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV (/lib/x86_64-linux-gnu/libc.so.6+0x18b97f) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: ==78==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0xff,0x61,0x52,0x52,0x52,0x52,0x61,0x52,0xfa,0x3e, Step #5: \377aRRRRaR\372> Step #5: artifact_prefix='./'; Test unit written to ./crash-c2d32a75384b689484257f7cf0965cadc2a289b4 Step #5: Base64: /2FSUlJSYVL6Pg== Step #5: MERGE-OUTER: attempt 4 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1222917621 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/c2d32a75384b689484257f7cf0965cadc2a289b4' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 2000 processed earlier; will process 9081 files now Step #5: #1 pulse exec/s: 0 rss: 32Mb Step #5: #2 pulse exec/s: 0 rss: 32Mb Step #5: #4 pulse exec/s: 0 rss: 34Mb Step #5: #8 pulse exec/s: 0 rss: 34Mb Step #5: Not a valid output format#16 pulse exec/s: 0 rss: 34Mb Step #5: #32 pulse exec/s: 0 rss: 36Mb Step #5: #64 pulse exec/s: 0 rss: 36Mb Step #5: This will prepare an index of and may take some time...Ten recursion levels exceeded. Step #5: Not a valid output formatNot a valid output format#128 pulse exec/s: 0 rss: 185Mb Step #5: Not a valid output formatUndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==82==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000030 (pc 0x5600fd4c3a6b bp 0x7ffe7d8be240 sp 0x7ffe7d8be070 T82) Step #5: ==82==The signal is caused by a READ memory access. Step #5: ==82==Hint: address points to the zero page. Step #5: #0 0x5600fd4c3a6b in GetIdx /src/openbabel/include/openbabel/atom.h:245:59 Step #5: #1 0x5600fd4c3a6b in OpenBabel::CacaoFormat::SetHilderbrandt(OpenBabel::OBMol&, std::__1::vector>&) /src/openbabel/src/formats/cacaoformat.cpp:255:36 Step #5: #2 0x5600fd4c3ccf in OpenBabel::CacaoInternalFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/cacaoformat.cpp:344:5 Step #5: #3 0x5600fd730d01 in OpenBabel::OBMoleculeFormat::WriteChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:173:26 Step #5: #4 0x5600fd3ee764 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:604:40 Step #5: #5 0x5600fd3ee0d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #6 0x5600fd3e9565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #7 0x5600fd34169d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #8 0x5600fd34ac38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #9 0x5600fd332139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #10 0x5600fd35de12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #11 0x7f04284d6082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #12 0x5600fd3254fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: GetIdx--OpenBabel::CacaoFormat::SetHilderbrandt(OpenBabel::OBMol&, std::__1::vector>&)--OpenBabel::CacaoInternalFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) Step #5: ==82==Register values: Step #5: rax = 0x00000000000000d5 rbx = 0x0000560100140270 rcx = 0x00000000000de955 rdx = 0x00000000000000d6 Step #5: rdi = 0x00000000000006b0 rsi = 0x00000000002dfb51 rbp = 0x00007ffe7d8be240 rsp = 0x00007ffe7d8be070 Step #5: r8 = 0x0000000000000348 r9 = 0x00005601003e4330 r10 = 0x0000000000000000 r11 = 0x00007ffe7d8c6280 Step #5: r12 = 0x00000000000000d6 r13 = 0x00005601003e5040 r14 = 0x0000560100221c00 r15 = 0x00000000000000d5 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV /src/openbabel/include/openbabel/atom.h:245:59 in GetIdx Step #5: ==82==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0xf7,0x63,0x56,0x74,0x52,0x5e,0xf3,0xa0,0x80,0xb9,0x3e, Step #5: \367cVtR^\363\240\200\271> Step #5: artifact_prefix='./'; Test unit written to ./crash-d9185b2a8cc573bd72c4d3c439d3ab87f863ebf6 Step #5: Base64: 92NWdFJe86CAuT4= Step #5: MERGE-OUTER: attempt 5 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1223842529 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/d9185b2a8cc573bd72c4d3c439d3ab87f863ebf6' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 2151 processed earlier; will process 8930 files now Step #5: #1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 33Mb Step #5: #4 pulse exec/s: 0 rss: 33Mb Step #5: #8 pulse exec/s: 0 rss: 34Mb Step #5: Not a valid output format#16 pulse exec/s: 0 rss: 36Mb Step #5: #32 pulse exec/s: 0 rss: 36Mb Step #5: #64 pulse exec/s: 0 rss: 36Mb Step #5: #128 pulse exec/s: 128 rss: 57Mb Step #5: UndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==86==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000000 (pc 0x55559bb5afc3 bp 0x7ffcea584530 sp 0x7ffcea57c3b0 T86) Step #5: ==86==The signal is caused by a READ memory access. Step #5: ==86==Hint: address points to the zero page. Step #5: #0 0x55559bb5afc3 in __is_long /usr/local/bin/../include/c++/v1/string:2099:12 Step #5: #1 0x55559bb5afc3 in __get_pointer /usr/local/bin/../include/c++/v1/string:2240:12 Step #5: #2 0x55559bb5afc3 in data /usr/local/bin/../include/c++/v1/string:1767:30 Step #5: #3 0x55559bb5afc3 in c_str /usr/local/bin/../include/c++/v1/string:1765:106 Step #5: #4 0x55559bb5afc3 in OpenBabel::MOPACCARTFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/mopacformat.cpp:688:31 Step #5: #5 0x55559be0023b in OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:101:18 Step #5: #6 0x55559babe564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #7 0x55559babe0d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #8 0x55559bab9565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #9 0x55559ba1169d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #10 0x55559ba1ac38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #11 0x55559ba02139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #12 0x55559ba2de12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #13 0x7f5177089082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #14 0x55559b9f54fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: __is_long--__get_pointer--data Step #5: ==86==Register values: Step #5: rax = 0x0000000000000000 rbx = 0x000000000000000a rcx = 0xaaaaaaaaaaaaaaab rdx = 0x0000000000000002 Step #5: rdi = 0x000055559be9f514 rsi = 0x0000000000000000 rbp = 0x00007ffcea584530 rsp = 0x00007ffcea57c3b0 Step #5: r8 = 0x000055559bfa6d04 r9 = 0x0000000000000000 r10 = 0x000000000000000b r11 = 0x00007ffcea584999 Step #5: r12 = 0x000055559ce39f80 r13 = 0x00007ffcea584500 r14 = 0x00007ffcea57c3b0 r15 = 0x000055559cb89c40 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV /src/openbabel/src/formats/mopacformat.cpp:688:31 in OpenBabel::MOPACCARTFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) Step #5: ==86==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0xff,0x61,0x21,0xd,0xd,0x0,0x0,0xd,0x0,0x0,0x0,0x0,0x69, Step #5: \377a!\015\015\000\000\015\000\000\000\000i Step #5: artifact_prefix='./'; Test unit written to ./crash-c785cc722a6b4751ad56271aa57705e1f4db299c Step #5: Base64: /2EhDQ0AAA0AAAAAaQ== Step #5: MERGE-OUTER: attempt 6 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1225792550 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/c785cc722a6b4751ad56271aa57705e1f4db299c' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 2355 processed earlier; will process 8726 files now Step #5: #1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 35Mb Step #5: #4 pulse exec/s: 0 rss: 35Mb Step #5: #8 pulse exec/s: 0 rss: 35Mb Step #5: #16 pulse exec/s: 0 rss: 35Mb Step #5: #32 pulse exec/s: 0 rss: 37Mb Step #5: #64 pulse exec/s: 0 rss: 39Mb Step #5: Ten recursion levels exceeded. Step #5: Step #5: Step #5: #128 pulse exec/s: 128 rss: 39Mb Step #5: #256 pulse exec/s: 128 rss: 41Mb Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Step #5: Step #5: ==90== ERROR: libFuzzer: out-of-memory (used: 5375Mb; limit: 2048Mb) Step #5: To change the out-of-memory limit use -rss_limit_mb= Step #5: Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0x32,0x31,0x34,0x37,0x34,0x38,0x33,0x36,0x34,0x37,0x6,0x2,0x1,0xf7,0x2,0x1,0xff, Step #5: 2147483647\006\002\001\367\002\001\377 Step #5: artifact_prefix='./'; Test unit written to ./oom-fbc665fd8b390262a581a3ac484b5ca41fd9b431 Step #5: Base64: MjE0NzQ4MzY0NwYCAfcCAf8= Step #5: SUMMARY: libFuzzer: out-of-memory Step #5: MERGE-OUTER: attempt 7 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1230811890 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/fbc665fd8b390262a581a3ac484b5ca41fd9b431' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 2764 processed earlier; will process 8317 files now Step #5: #1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 34Mb Step #5: #4 pulse exec/s: 0 rss: 35Mb Step #5: #8 pulse exec/s: 0 rss: 35Mb Step #5: #16 pulse exec/s: 0 rss: 36Mb Step #5: Not a valid output format#32 pulse exec/s: 0 rss: 297Mb Step #5: #64 pulse exec/s: 0 rss: 297Mb Step #5: Not a valid output format#128 pulse exec/s: 128 rss: 297Mb Step #5: Not a valid output format#256 pulse exec/s: 128 rss: 297Mb Step #5: Step #5: Step #5: Not a valid output formatNot a valid output format Step #5: Step #5: Not a valid output format#512 pulse exec/s: 56 rss: 558Mb Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Not a valid output formatNot a valid output formatNot a valid output formatUndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==149==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000048 (pc 0x558293f15b01 bp 0x7ffec5ff5f60 sp 0x7ffec5fed800 T149) Step #5: ==149==The signal is caused by a READ memory access. Step #5: ==149==Hint: address points to the zero page. Step #5: #0 0x558293f15b01 in __is_long /usr/local/bin/../include/c++/v1/string:2099:12 Step #5: #1 0x558293f15b01 in __get_pointer /usr/local/bin/../include/c++/v1/string:2240:12 Step #5: #2 0x558293f15b01 in data /usr/local/bin/../include/c++/v1/string:1767:30 Step #5: #3 0x558293f15b01 in c_str /usr/local/bin/../include/c++/v1/string:1765:106 Step #5: #4 0x558293f15b01 in OpenBabel::GaussianOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/gaussformat.cpp:1030:34 Step #5: #5 0x5582941d323b in OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:101:18 Step #5: #6 0x558293e91564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #7 0x558293e910d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #8 0x558293e8c565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #9 0x558293de469d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #10 0x558293dedc38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #11 0x558293dd5139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #12 0x558293e00e12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #13 0x7ffaa804e082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #14 0x558293dc84fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: __is_long--__get_pointer--data Step #5: ==149==Register values: Step #5: rax = 0x0000558294272501 rbx = 0x0000000000000000 rcx = 0xffffffffffffffff rdx = 0x0000000000000004 Step #5: rdi = 0x0000000000000000 rsi = 0x0000000000000020 rbp = 0x00007ffec5ff5f60 rsp = 0x00007ffec5fed800 Step #5: r8 = 0x00000000000267df r9 = 0x0000000000000000 r10 = 0x0000000000000017 r11 = 0x0000558296e6d5f0 Step #5: r12 = 0x00007ffec5ff6220 r13 = 0x0000000000000000 r14 = 0x00007ffec5fed800 r15 = 0x00007ffec5ff5f10 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV /src/openbabel/src/formats/gaussformat.cpp:1030:34 in OpenBabel::GaussianOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) Step #5: ==149==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0xff,0x20,0x54,0x68,0x69,0x73,0x20,0x6d,0x6f,0x6c,0x65,0x63,0x75,0x6c,0x65,0x20,0x69,0x73,0x20,0x2d,0xff,0xff,0xff,0x7f,0x3f, Step #5: \377 This molecule is -\377\377\377\177? Step #5: artifact_prefix='./'; Test unit written to ./crash-d1179c383be2a7014d5f72b37c28d9a9a3064bbc Step #5: Base64: /yBUaGlzIG1vbGVjdWxlIGlzIC3///9/Pw== Step #5: MERGE-OUTER: attempt 8 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1241198871 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/d1179c383be2a7014d5f72b37c28d9a9a3064bbc' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 3474 processed earlier; will process 7607 files now Step #5: #1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 33Mb Step #5: #4 pulse exec/s: 0 rss: 34Mb Step #5: #8 pulse exec/s: 0 rss: 34Mb Step #5: #16 pulse exec/s: 0 rss: 36Mb Step #5: #32 pulse exec/s: 0 rss: 37Mb Step #5: #64 pulse exec/s: 0 rss: 40Mb Step #5: Not a valid output format#128 pulse exec/s: 64 rss: 40Mb Step #5: #256 pulse exec/s: 64 rss: 41Mb Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Not a valid output formatInvalid format in geometry specification. Step #5: Step #5: Step #5: Not a valid output formatNot a valid output formatNot a valid output format#512 pulse exec/s: 73 rss: 47Mb Step #5: Not a valid output formatNot a valid output formatNot a valid output format Step #5: Step #5: Step #5: Step #5: Not a valid output formatNot a valid output formatNot a valid output format Step #5: Step #5: Not a valid output format#1024 pulse exec/s: 73 rss: 47Mb Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Not a valid output format Step #5: Step #5: UndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==153==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000000 (pc 0x55c1e266f160 bp 0x7ffde13cb020 sp 0x7ffde13c2e80 T153) Step #5: ==153==The signal is caused by a READ memory access. Step #5: ==153==Hint: address points to the zero page. Step #5: #0 0x55c1e266f160 in construct /usr/local/bin/../include/c++/v1/__memory/allocator.h:153:28 Step #5: #1 0x55c1e266f160 in construct /usr/local/bin/../include/c++/v1/__memory/allocator_traits.h:296:9 Step #5: #2 0x55c1e266f160 in __emplace_back_slow_path /usr/local/bin/../include/c++/v1/__vector/vector.h:1139:3 Step #5: #3 0x55c1e266f160 in emplace_back /usr/local/bin/../include/c++/v1/__vector/vector.h:1159:13 Step #5: #4 0x55c1e266f160 in push_back /usr/local/bin/../include/c++/v1/__vector/vector.h:464:93 Step #5: #5 0x55c1e266f160 in OpenBabel::MolproOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/molproformat.cpp:232:27 Step #5: #6 0x55c1e291a23b in OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:101:18 Step #5: #7 0x55c1e25d8564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #8 0x55c1e25d80d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #9 0x55c1e25d3565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #10 0x55c1e252b69d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #11 0x55c1e2534c38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #12 0x55c1e251c139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #13 0x55c1e2547e12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #14 0x7f35003af082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #15 0x55c1e250f4fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: construct--construct--__emplace_back_slow_path Step #5: ==153==Register values: Step #5: rax = 0x000055c1e59e1810 rbx = 0x000055c1e59e1818 rcx = 0x0000000000000000 rdx = 0x0000000000000000 Step #5: rdi = 0x0000000000000008 rsi = 0x000055c1e57a72a0 rbp = 0x00007ffde13cb020 rsp = 0x00007ffde13c2e80 Step #5: r8 = 0x000055c1e59e1810 r9 = 0x0000000000000000 r10 = 0x000000000000002e r11 = 0x000055c1e57973a0 Step #5: r12 = 0x000055c1e59e1810 r13 = 0x0000000000000000 r14 = 0x0000000000000000 r15 = 0x0000000000000000 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV /src/openbabel/src/formats/molproformat.cpp:232:27 in OpenBabel::MolproOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) Step #5: ==153==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0x20,0x57,0x61,0x76,0x65,0x6e,0x75,0x6d,0x62,0x65,0x72,0x73,0x20,0x5b,0x63,0x6d,0x2d,0x31,0x5d,0x20,0x20,0x4f,0x50,0x46,0x52,0x45,0x51,0x55,0x45,0x4e,0x43,0x59,0x3a,0x20,0x5b,0x63,0xa,0x2,0x31,0x2e,0x5d,0x1e,0x0,0x6d,0x69,0x2a,0x44,0x70, Step #5: Wavenumbers [cm-1] OPFREQUENCY: [c\012\0021.]\036\000mi*Dp Step #5: artifact_prefix='./'; Test unit written to ./crash-c019bcaa8a54cca3251a552e8cc6f7fb842ccb83 Step #5: Base64: IFdhdmVudW1iZXJzIFtjbS0xXSAgT1BGUkVRVUVOQ1k6IFtjCgIxLl0eAG1pKkRw Step #5: MERGE-OUTER: attempt 9 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1257683094 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/c019bcaa8a54cca3251a552e8cc6f7fb842ccb83' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 4623 processed earlier; will process 6458 files now Step #5: #1 pulse exec/s: 0 rss: 34Mb Step #5: #2 pulse exec/s: 0 rss: 34Mb Step #5: #4 pulse exec/s: 0 rss: 37Mb Step #5: Not a valid output format#8 pulse exec/s: 0 rss: 37Mb Step #5: Not a valid output formatNot a valid output format#16 pulse exec/s: 0 rss: 37Mb Step #5: Not a valid output format#32 pulse exec/s: 0 rss: 38Mb Step #5: #64 pulse exec/s: 64 rss: 44Mb Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Ten recursion levels exceeded. Step #5: Not a valid output format#128 pulse exec/s: 64 rss: 48Mb Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output format#256 pulse exec/s: 64 rss: 49Mb Step #5: Not a valid output formatNot a valid output format Step #5: Step #5: Not a valid output formatNot a valid output formatNot a valid output formatUndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==161==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000000 (pc 0x55a53d82005a bp 0x7ffe00850f50 sp 0x7ffe00848d50 T161) Step #5: ==161==The signal is caused by a READ memory access. Step #5: ==161==Hint: address points to the zero page. Step #5: #0 0x55a53d82005a in OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/abinitformat.cpp:216:18 Step #5: #1 0x55a53daff23b in OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:101:18 Step #5: #2 0x55a53d7bd564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #3 0x55a53d7bd0d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #4 0x55a53d7b8565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #5 0x55a53d71069d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #6 0x55a53d719c38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #7 0x55a53d701139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #8 0x55a53d72ce12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #9 0x7faa3b851082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #10 0x55a53d6f44fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)--OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*)--OpenBabel::OBConversion::Convert() Step #5: ==161==Register values: Step #5: rax = 0x000055a53f11f1e0 rbx = 0x000000003de042d0 rcx = 0x0000000000000001 rdx = 0x000055a53ed23b50 Step #5: rdi = 0x000055a53f0bdab0 rsi = 0x0000000000000007 rbp = 0x00007ffe00850f50 rsp = 0x00007ffe00848d50 Step #5: r8 = 0x000055a53ed23b50 r9 = 0x0000000000000064 r10 = 0x000000000000003b r11 = 0x000055a53ed56200 Step #5: r12 = 0x000055a53f0bdab0 r13 = 0x0000000000000000 r14 = 0x000055a53de042d0 r15 = 0x0000000000000000 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV /src/openbabel/src/formats/abinitformat.cpp:216:18 in OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) Step #5: ==161==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0xc5,0xd0,0xd3,0xc6,0xe9,0x55,0x19,0x1,0x0,0x0,0x0,0x0,0x20,0x59,0x65,0x6c,0x6c,0x6f,0x2e,0x10,0x20,0x0,0x0,0x0,0x31,0x0,0x0,0x0,0x8,0x3d,0x0,0x0,0x45,0x50,0x2a,0x0,0x8,0x0,0x0,0x0,0x3,0x0,0x1,0x1,0x11,0x0,0x1,0x0,0x0,0x0,0x18,0x0,0x0,0x0,0x76,0x0,0xff,0xff,0xff,0xff,0x5, Step #5: \305\320\323\306\351U\031\001\000\000\000\000 Yello.\020 \000\000\0001\000\000\000\010=\000\000EP*\000\010\000\000\000\003\000\001\001\021\000\001\000\000\000\030\000\000\000v\000\377\377\377\377\005 Step #5: artifact_prefix='./'; Test unit written to ./crash-ee72fc8513f9e4413ee8fb5cde93e9ac0dcb75f1 Step #5: Base64: xdDTxulVGQEAAAAAIFllbGxvLhAgAAAAMQAAAAg9AABFUCoACAAAAAMAAQERAAEAAAAYAAAAdgD/////BQ== Step #5: MERGE-OUTER: attempt 10 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1264452637 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/ee72fc8513f9e4413ee8fb5cde93e9ac0dcb75f1' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 5005 processed earlier; will process 6076 files now Step #5: #1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 35Mb Step #5: #4 pulse exec/s: 0 rss: 35Mb Step #5: #8 pulse exec/s: 0 rss: 35Mb Step #5: #16 pulse exec/s: 0 rss: 36Mb Step #5: #32 pulse exec/s: 0 rss: 36Mb Step #5: Step #5: Step #5: #64 pulse exec/s: 0 rss: 44Mb Step #5: Not a valid output formatNot a valid output formatNot a valid output format#128 pulse exec/s: 128 rss: 44Mb Step #5: Not a valid output format Step #5: Step #5: Not a valid output formatNot a valid output format==221== ERROR: libFuzzer: out-of-memory (used: 3024Mb; limit: 2048Mb) Step #5: To change the out-of-memory limit use -rss_limit_mb= Step #5: Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0x34,0xa,0x39,0x82,0x39,0x30,0x38,0x41,0x36,0x33,0x53,0x33,0xd,0x38,0x33,0x17,0x31,0x37,0x30,0x5,0xff,0xff,0x5,0x39,0x48,0x32,0x42,0x37,0xbe,0x37,0x31,0x34,0xa,0x39,0x82,0x39,0x30,0x38,0x41,0x36,0x33,0x53,0x33,0xd,0x38,0x31,0xde,0xde,0xde,0xde,0xde,0xde,0x38,0x36,0x33,0x36,0x36,0x31,0x32,0xd,0x38,0x39,0x30,0x7d,0xff, Step #5: 4\0129\202908A63S3\01583\027170\005\377\377\0059H2B7\276714\0129\202908A63S3\01581\336\336\336\336\336\3368636612\015890}\377 Step #5: artifact_prefix='./'; Test unit written to ./oom-2979ea392b015a3f939741c9e4cdc1b8465ebaa5 Step #5: Base64: NAo5gjkwOEE2M1MzDTgzFzE3MAX//wU5SDJCN743MTQKOYI5MDhBNjNTMw04Md7e3t7e3jg2MzY2MTINODkwff8= Step #5: SUMMARY: libFuzzer: out-of-memory Step #5: MERGE-OUTER: attempt 11 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1277469359 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/2979ea392b015a3f939741c9e4cdc1b8465ebaa5' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 5161 processed earlier; will process 5920 files now Step #5: #1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 33Mb Step #5: #4 pulse exec/s: 0 rss: 33Mb Step #5: Not a valid output format#8 pulse exec/s: 0 rss: 34Mb Step #5: #16 pulse exec/s: 0 rss: 36Mb Step #5: Not a valid output format#32 pulse exec/s: 0 rss: 38Mb Step #5: #64 pulse exec/s: 0 rss: 40Mb Step #5: Not a valid output format#128 pulse exec/s: 128 rss: 66Mb Step #5: Ten recursion levels exceeded. Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output format#256 pulse exec/s: 85 rss: 66Mb Step #5: Not a valid output formatNot a valid output formatNot a valid output format Step #5: Step #5: Not a valid output format Step #5: Step #5: Step #5: Step #5: Not a valid output format#512 pulse exec/s: 64 rss: 66Mb Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output format Step #5: Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output format#1024 pulse exec/s: 73 rss: 66Mb Step #5: Not a valid output formatNot a valid output formatUndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==224==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000000 (pc 0x55e50a03305a bp 0x7ffe36c4f260 sp 0x7ffe36c47060 T224) Step #5: ==224==The signal is caused by a READ memory access. Step #5: ==224==Hint: address points to the zero page. Step #5: #0 0x55e50a03305a in OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/abinitformat.cpp:216:18 Step #5: #1 0x55e50a31223b in OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:101:18 Step #5: #2 0x55e509fd0564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #3 0x55e509fd00d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #4 0x55e509fcb565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #5 0x55e509f2369d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #6 0x55e509f2cc38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #7 0x55e509f14139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #8 0x55e509f3fe12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #9 0x7fab98256082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #10 0x55e509f074fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)--OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*)--OpenBabel::OBConversion::Convert() Step #5: ==224==Register values: Step #5: rax = 0x000055e50ccc8ae0 rbx = 0x000000000a6172d0 rcx = 0x0000000000000001 rdx = 0x000055e50cf05690 Step #5: rdi = 0x000055e50cd03110 rsi = 0x0000000000000007 rbp = 0x00007ffe36c4f260 rsp = 0x00007ffe36c47060 Step #5: r8 = 0x000055e50cf05690 r9 = 0x0000000000000064 r10 = 0x000000000000007d r11 = 0x000055e50d0e4520 Step #5: r12 = 0x000055e50cd03110 r13 = 0x0000000000000000 r14 = 0x000055e50a6172d0 r15 = 0x0000000000000000 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV /src/openbabel/src/formats/abinitformat.cpp:216:18 in OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) Step #5: ==224==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0x31,0xa,0xbf,0x9,0xae,0x8b,0x5f,0x5,0xbe,0x31,0xf,0xbb,0xd4,0xbb,0xbb,0xbb,0xbb,0xbb,0xbb,0xbb,0xbb,0xbb,0xbb,0x70,0x77,0x73,0x61,0x61,0x61,0x61,0x61,0x61,0xa,0x41,0x54,0x4f,0x4d,0x45,0xff,0x46,0x6f,0x72,0x63,0x65,0x73,0x20,0x26,0x49,0x61,0x73,0x74,0x72,0x65,0x65,0x73,0x73,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xfd,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xdf,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0x43,0x68,0x61,0x72,0xa,0xa,0xa,0x20,0x45,0x53,0x50,0x20,0x66,0x69,0x7a,0x61,0x62,0x69,0x6c,0x69,0x74,0x79,0x2a,0xba,0x3e,0xa,0xa,0x5, Step #5: 1\012\277\011\256\213_\005\2761\017\273\324\273\273\273\273\273\273\273\273\273\273pwsaaaaaa\012ATOME\377Forces &Iastreess\377\377\377\377\377\377\377\377\377\377\377\377\377\375\377\377\377\377\377\377\377\377\377\377\377\377\377\377\337\377\377\377\377\377\377\377\377\377\377\377\377\377\377Char\012\012\012 ESP fizability*\272>\012\012\005 Step #5: artifact_prefix='./'; Test unit written to ./crash-c704023d7044bc1cbf2cce45216661d07611664e Step #5: Base64: MQq/Ca6LXwW+MQ+71Lu7u7u7u7u7u7twd3NhYWFhYWEKQVRPTUX/Rm9yY2VzICZJYXN0cmVlc3P//////////////////f//////////////////3///////////////////Q2hhcgoKCiBFU1AgZml6YWJpbGl0eSq6PgoKBQ== Step #5: MERGE-OUTER: attempt 12 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1292404064 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/c704023d7044bc1cbf2cce45216661d07611664e' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 6210 processed earlier; will process 4871 files now Step #5: #1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 33Mb Step #5: #4 pulse exec/s: 0 rss: 39Mb Step #5: #8 pulse exec/s: 0 rss: 42Mb Step #5: #16 pulse exec/s: 0 rss: 42Mb Step #5: UndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==228==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000000 (pc 0x55c7579e705a bp 0x7ffeac57d6d0 sp 0x7ffeac5754d0 T228) Step #5: ==228==The signal is caused by a READ memory access. Step #5: ==228==Hint: address points to the zero page. Step #5: #0 0x55c7579e705a in OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/abinitformat.cpp:216:18 Step #5: #1 0x55c757cc623b in OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:101:18 Step #5: #2 0x55c757984564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #3 0x55c7579840d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #4 0x55c75797f565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #5 0x55c7578d769d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #6 0x55c7578e0c38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #7 0x55c7578c8139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #8 0x55c7578f3e12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #9 0x7fab149f6082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #10 0x55c7578bb4fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)--OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*)--OpenBabel::OBConversion::Convert() Step #5: ==228==Register values: Step #5: rax = 0x000055c75a9b06b0 rbx = 0x0000000057fcb2d0 rcx = 0x0000000000000001 rdx = 0x000055c75ac19170 Step #5: rdi = 0x000055c75a9bae70 rsi = 0x0000000000000007 rbp = 0x00007ffeac57d6d0 rsp = 0x00007ffeac5754d0 Step #5: r8 = 0x000055c75ac19170 r9 = 0x0000000000000064 r10 = 0x000000000000007e r11 = 0x000055c75a9998e0 Step #5: r12 = 0x000055c75a9bae70 r13 = 0x0000000000000000 r14 = 0x000055c757fcb2d0 r15 = 0x0000000000000000 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV /src/openbabel/src/formats/abinitformat.cpp:216:18 in OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) Step #5: ==228==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0x31,0xa,0xbf,0x9,0x69,0xae,0x8b,0x5f,0x5,0xbe,0x31,0xf,0xbb,0xd4,0xbb,0xbb,0xbb,0xbb,0xbb,0xbb,0xbb,0xbb,0xbb,0xbb,0x70,0x77,0x73,0x61,0x61,0x61,0x61,0x61,0x61,0xa,0x41,0x54,0x4f,0x4d,0x45,0xff,0x46,0x6f,0x72,0x63,0x65,0x73,0x20,0x26,0x48,0x61,0x73,0x74,0x72,0x65,0x65,0x73,0x73,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xfd,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xdf,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0xff,0x43,0x68,0x61,0x72,0xa,0xa,0xa,0x20,0x45,0x53,0x50,0x20,0x66,0x69,0x7a,0x61,0x62,0x69,0x6c,0x69,0x74,0x79,0x2a,0xba,0x3e,0xa,0xa,0x5, Step #5: 1\012\277\011i\256\213_\005\2761\017\273\324\273\273\273\273\273\273\273\273\273\273pwsaaaaaa\012ATOME\377Forces &Hastreess\377\377\377\377\377\377\377\377\377\377\377\377\377\375\377\377\377\377\377\377\377\377\377\377\377\377\377\377\337\377\377\377\377\377\377\377\377\377\377\377\377\377\377Char\012\012\012 ESP fizability*\272>\012\012\005 Step #5: artifact_prefix='./'; Test unit written to ./crash-714d13c28b37c82f22d4df0cf00b6ba3bb9abd9b Step #5: Base64: MQq/CWmui18FvjEPu9S7u7u7u7u7u7u7cHdzYWFhYWFhCkFUT01F/0ZvcmNlcyAmSGFzdHJlZXNz//////////////////3//////////////////9///////////////////0NoYXIKCgogRVNQIGZpemFiaWxpdHkquj4KCgU= Step #5: MERGE-OUTER: attempt 13 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1292764433 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/714d13c28b37c82f22d4df0cf00b6ba3bb9abd9b' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 6233 processed earlier; will process 4848 files now Step #5: #1 pulse exec/s: 0 rss: 32Mb Step #5: #2 pulse exec/s: 0 rss: 32Mb Step #5: #4 pulse exec/s: 0 rss: 33Mb Step #5: #8 pulse exec/s: 0 rss: 33Mb Step #5: #16 pulse exec/s: 0 rss: 36Mb Step #5: UndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==232==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address (pc 0x7f0aef34f083 bp 0x7ffcfac62460 sp 0x7ffcfac62438 T232) Step #5: ==232==The signal is caused by a READ memory access. Step #5: ==232==Hint: this fault was caused by a dereference of a high value address (see register values below). Disassemble the provided pc to learn which register was used. Step #5: #0 0x7f0aef34f083 (/lib/x86_64-linux-gnu/libc.so.6+0x185083) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #1 0x55dd68c2e9d2 in memcmp /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerInterceptors.cpp:162:16 Step #5: #2 0x55dd68d48029 in compare /usr/local/bin/../include/c++/v1/__string/char_traits.h:125:14 Step #5: #3 0x55dd68d48029 in compare >, 0> /usr/local/bin/../include/c++/v1/string:1993:24 Step #5: #4 0x55dd68d48029 in compare /usr/local/bin/../include/c++/v1/string:1985:12 Step #5: #5 0x55dd68d48029 in operator<, std::__1::allocator > /usr/local/bin/../include/c++/v1/string:3644:16 Step #5: #6 0x55dd68d48029 in operator() /usr/local/bin/../include/c++/v1/__functional/operations.h:357:16 Step #5: #7 0x55dd68d48029 in operator() /usr/local/bin/../include/c++/v1/map:649:12 Step #5: #8 0x55dd68d48029 in __lower_bound, std::__1::allocator > > /usr/local/bin/../include/c++/v1/__tree:2123:10 Step #5: #9 0x55dd68d48029 in std::__1::__tree_iterator, std::__1::allocator>, std::__1::shared_ptr>, std::__1::__tree_node, std::__1::allocator>, std::__1::shared_ptr>, void*>*, long> std::__1::__tree, std::__1::allocator>, std::__1::shared_ptr>, std::__1::__map_value_compare, std::__1::allocator>, std::__1::pair, std::__1::allocator> const, std::__1::shared_ptr>, std::__1::less, std::__1::allocator>>, true>, std::__1::allocator, std::__1::allocator> const, std::__1::shared_ptr>>>::find, std::__1::allocator>>(std::__1::basic_string, std::__1::allocator> const&) /usr/local/bin/../include/c++/v1/__tree:2066:18 Step #5: #10 0x55dd68d43d72 in find /usr/local/bin/../include/c++/v1/map:1246:77 Step #5: #11 0x55dd68d43d72 in OpenBabel::ChemKinFormat::CheckSpecies(std::__1::basic_string, std::__1::allocator>&, std::__1::basic_string, std::__1::allocator>&, bool) /src/openbabel/src/formats/chemkinformat.cpp:659:35 Step #5: #12 0x55dd68d4263c in OpenBabel::ChemKinFormat::ReadReactionQualifierLines(std::__1::basic_istream>&, OpenBabel::OBReaction*) /src/openbabel/src/formats/chemkinformat.cpp:639:34 Step #5: #13 0x55dd68d3e4b1 in OpenBabel::ChemKinFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/chemkinformat.cpp:207:8 Step #5: #14 0x55dd68d46d2b in OpenBabel::ChemKinFormat::ReadChemObject(OpenBabel::OBConversion*) /src/openbabel/src/formats/chemkinformat.cpp:123:14 Step #5: #15 0x55dd68c60564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #16 0x55dd68c600d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #17 0x55dd68c5b565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #18 0x55dd68bb369d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #19 0x55dd68bbcc38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #20 0x55dd68ba4139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #21 0x55dd68bcfe12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #22 0x7f0aef1ee082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #23 0x55dd68b974fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: memcmp--compare Step #5: ==232==Register values: Step #5: rax = 0x000000000000004d rbx = 0x000055dd6b550ab1 rcx = 0x000055dd69ceb2f8 rdx = 0x0000000000000001 Step #5: rdi = 0x000055dd6b550ab1 rsi = 0x3163635d486e5b63 rbp = 0x00007ffcfac62460 rsp = 0x00007ffcfac62438 Step #5: r8 = 0x0000000000000000 r9 = 0x0000000000000003 r10 = 0x00007f0aef34ff70 r11 = 0x00007f0aef3b6be0 Step #5: r12 = 0x315d313a32446e5b r13 = 0x000055dd6b550a90 r14 = 0x3163635d486e5b63 r15 = 0x0000000000000001 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV (/lib/x86_64-linux-gnu/libc.so.6+0x185083) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: ==232==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: 0x3d,0x7a,0xa,0x3d,0x7a,0xa,0xa,0x3d,0x7a,0xa,0x9b,0x78,0x78,0x78,0xa0,0x0,0xf3,0x80,0xfb,0x0,0x80,0xff,0x36,0x9a,0x78,0x3d,0x7a,0xa,0x3d,0x7a,0xa,0x3d,0x7a,0xa,0x9b,0x78,0x78,0x0,0x0,0x0,0x0,0x0,0x0,0x0,0x0,0x0,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0x53,0x4f,0x43,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0xec,0x4,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0xd,0x54,0x53,0xd,0xd,0x54,0x54,0x54,0x54,0x54,0x54,0x54,0x54,0x54,0x54,0xcc,0xcc,0xcc,0xcc,0xcc,0xcc,0xcc,0xcc,0xcc,0xcc,0xcc,0xa,0x9b,0x78,0x78,0x78,0xa0,0x0,0x1,0x0,0x0,0x0,0xf3,0x80,0xfb,0x0,0x80,0xff,0x36,0x9a,0x78,0xbb,0x78,0x21,0x21, Step #5: =z\012=z\012\012=z\012\233xxx\240\000\363\200\373\000\200\3776\232x=z\012=z\012=z\012\233xx\000\000\000\000\000\000\000\000\000\015\015\015\015\015\015\015SOC\015\015\015\015\015\015\015\015\015\015\015\015\354\004\015\015\015\015\015\015\015\015\015\015TS\015\015TTTTTTTTTT\314\314\314\314\314\314\314\314\314\314\314\012\233xxx\240\000\001\000\000\000\363\200\373\000\200\3776\232x\273x!! Step #5: artifact_prefix='./'; Test unit written to ./crash-13f1f131a9f4c00aa7cf9f7360e9469f7a30e601 Step #5: Base64: PXoKPXoKCj16Cpt4eHigAPOA+wCA/zaaeD16Cj16Cj16Cpt4eAAAAAAAAAAAAA0NDQ0NDQ1TT0MNDQ0NDQ0NDQ0NDQ3sBA0NDQ0NDQ0NDQ1UUw0NVFRUVFRUVFRUVMzMzMzMzMzMzMzMCpt4eHigAAEAAADzgPsAgP82mni7eCEh Step #5: MERGE-OUTER: attempt 14 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1292840431 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/13f1f131a9f4c00aa7cf9f7360e9469f7a30e601' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 6251 processed earlier; will process 4830 files now Step #5: #1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 33Mb Step #5: #4 pulse exec/s: 0 rss: 33Mb Step #5: #8 pulse exec/s: 0 rss: 36Mb Step #5: Step #5: Step #5: #16 pulse exec/s: 0 rss: 45Mb Step #5: #32 pulse exec/s: 0 rss: 50Mb Step #5: Not a valid output format#64 pulse exec/s: 64 rss: 50Mb Step #5: Not a valid output format#128 pulse exec/s: 64 rss: 54Mb Step #5: Not a valid output formatNot a valid output formatNot a valid output formatWARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Not a valid output formatNot a valid output formatWARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: #256 pulse exec/s: 85 rss: 54Mb Step #5: #512 pulse exec/s: 64 rss: 57Mb Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatWARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Mixed Cartesian and internal coordinates are currently not supported. Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output format#1024 pulse exec/s: 68 rss: 69Mb Step #5: Not a valid output formatNot a valid output format Step #5: Step #5: Step #5: Step #5: Step #5: Step #5: Step #5: Step #5: Mixed Cartesian and internal coordinates are currently not supported. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatWARNING: element number given in 3rd column does not agree with element name on 10 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatI: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: Not a valid output formatWARNING: element number given in 3rd column does not agree with element name on 16 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Not a valid output formatNot a valid output formatNot a valid output formatI: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 16 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Invalid format in geometry specification. Step #5: Not a valid output formatNot a valid output formatNot a valid output formatI: identified residue wrt insertion code: '>' Step #5: Not a valid output formatI: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: Not a valid output formatNot a valid output formatInvalid format in geometry specification. Step #5: I: identified residue wrt insertion code: '' Step #5: Not a valid output format Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatI: identified residue wrt insertion code: 'f' Step #5: Not a valid output formatWARNING: element number given in 3rd column does not agree with element name on 19 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Not a valid output formatI: identified residue wrt insertion code: 'Ä' Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output format Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Invalid format in geometry specification. Step #5: I: identified residue wrt insertion code: '>' Step #5: #2048 pulse exec/s: 70 rss: 98Mb Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'f' Step #5: Not a valid output formatNot a valid output formatI: identified residue wrt insertion code: 'f' Step #5: Not a valid output formatNot a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output format Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatNot a valid output formatNot a valid output format Wrong number of coordinates! Step #5: Not a valid output formatNot a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Not a valid output formatI: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Invalid format in geometry specification. Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '6' Step #5: I: identified residue wrt insertion code: '>' Step #5: Not a valid output formatNot a valid output formatI: identified residue wrt insertion code: 'ÿ' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: Step #5: Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatI: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 's' Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: Not a valid output formatNot a valid output format Step #5: Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Not a valid output formatWARNING: element number given in 3rd column does not agree with element name on 5 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 40 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ü' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'Ü' Step #5: I: identified residue wrt insertion code: 'f' Step #5: UndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==236==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000000 (pc 0x559856a4805a bp 0x7fff45407940 sp 0x7fff453ff740 T236) Step #5: ==236==The signal is caused by a READ memory access. Step #5: ==236==Hint: address points to the zero page. Step #5: #0 0x559856a4805a in OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/abinitformat.cpp:216:18 Step #5: #1 0x559856d2723b in OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:101:18 Step #5: #2 0x5598569e5564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #3 0x5598569e50d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #4 0x5598569e0565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #5 0x55985693869d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #6 0x559856941c38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #7 0x559856929139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #8 0x559856954e12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #9 0x7ff824e15082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #10 0x55985691c4fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)--OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*)--OpenBabel::OBConversion::Convert() Step #5: ==236==Register values: Step #5: rax = 0x0000559859cb1e60 rbx = 0x000000005702c2d0 rcx = 0x0000000000000001 rdx = 0x00005598596ac4f0 Step #5: rdi = 0x0000559859617d60 rsi = 0x0000000000000007 rbp = 0x00007fff45407940 rsp = 0x00007fff453ff740 Step #5: r8 = 0x00005598596ac4f0 r9 = 0x0000000000000064 r10 = 0x0000000000000524 r11 = 0x0000559859221100 Step #5: r12 = 0x0000559859617d60 r13 = 0x0000000000000000 r14 = 0x000055985702c2d0 r15 = 0x0000000000000000 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV /src/openbabel/src/formats/abinitformat.cpp:216:18 in OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) Step #5: ==236==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: artifact_prefix='./'; Test unit written to ./crash-33b194b16d78f76174c8346085c62e1cf0871117 Step #5: MERGE-OUTER: attempt 15 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1332766593 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/33b194b16d78f76174c8346085c62e1cf0871117' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 8975 processed earlier; will process 2106 files now Step #5: #1 pulse exec/s: 0 rss: 37Mb Step #5: #2 pulse exec/s: 0 rss: 37Mb Step #5: #4 pulse exec/s: 0 rss: 58Mb Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: #8 pulse exec/s: 0 rss: 58Mb Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: #16 pulse exec/s: 0 rss: 58Mb Step #5: #32 pulse exec/s: 0 rss: 58Mb Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: #64 pulse exec/s: 0 rss: 58Mb Step #5: I: identified residue wrt insertion code: 'J' Step #5: WARNING: element number given in 3rd column does not agree with element name on 17 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: I: identified residue wrt insertion code: '>' Step #5: Invalid format in geometry specification. Step #5: I: identified residue wrt insertion code: '>' Step #5: WARNING: element number given in 3rd column does not agree with element name on 58 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Not a valid output formatI: identified residue wrt insertion code: '1' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'f' Step #5: #128 pulse exec/s: 0 rss: 58Mb Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: UndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==240==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000000 (pc 0x562f419d805a bp 0x7fff32cfd610 sp 0x7fff32cf5410 T240) Step #5: ==240==The signal is caused by a READ memory access. Step #5: ==240==Hint: address points to the zero page. Step #5: #0 0x562f419d805a in OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/abinitformat.cpp:216:18 Step #5: #1 0x562f41cb723b in OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:101:18 Step #5: #2 0x562f41975564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #3 0x562f419750d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #4 0x562f41970565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #5 0x562f418c869d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #6 0x562f418d1c38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #7 0x562f418b9139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #8 0x562f418e4e12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #9 0x7fdb640db082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #10 0x562f418ac4fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)--OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*)--OpenBabel::OBConversion::Convert() Step #5: ==240==Register values: Step #5: rax = 0x0000562f443ee260 rbx = 0x0000000041fbc2d0 rcx = 0x0000000000000001 rdx = 0x0000562f4413daa0 Step #5: rdi = 0x0000562f43f7c750 rsi = 0x0000000000000007 rbp = 0x00007fff32cfd610 rsp = 0x00007fff32cf5410 Step #5: r8 = 0x0000562f4413daa0 r9 = 0x0000000000000064 r10 = 0x000000000000065a r11 = 0x0000562f43f64860 Step #5: r12 = 0x0000562f43f7c750 r13 = 0x0000000000000000 r14 = 0x0000562f41fbc2d0 r15 = 0x0000000000000000 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV /src/openbabel/src/formats/abinitformat.cpp:216:18 in OpenBabel::ABINITFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) Step #5: ==240==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: artifact_prefix='./'; Test unit written to ./crash-57bed77621fb4ad77ca8f3976c843e97cf17e25d Step #5: MERGE-OUTER: attempt 16 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1333569078 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/57bed77621fb4ad77ca8f3976c843e97cf17e25d' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 9130 processed earlier; will process 1951 files now Step #5: Not a valid output format#1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 34Mb Step #5: WARNING: element number given in 3rd column does not agree with element name on 63 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: #4 pulse exec/s: 0 rss: 34Mb Step #5: #8 pulse exec/s: 0 rss: 35Mb Step #5: #16 pulse exec/s: 0 rss: 35Mb Step #5: #32 pulse exec/s: 0 rss: 36Mb Step #5: WARNING: element number given in 3rd column does not agree with element name on 3 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '~' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: #64 pulse exec/s: 0 rss: 36Mb Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: #128 pulse exec/s: 0 rss: 78Mb Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Not a valid output formatNot a valid output formatWARNING: element number given in 3rd column does not agree with element name on 21 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: Ten recursion levels exceeded. Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '1' Step #5: I: identified residue wrt insertion code: '1' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: #256 pulse exec/s: 0 rss: 78Mb Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: Not a valid output formatNot a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Not a valid output formatWARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatNot a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: #512 pulse exec/s: 512 rss: 78Mb Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: UndefinedBehaviorSanitizer:DEADLYSIGNAL Step #5: ==244==ERROR: UndefinedBehaviorSanitizer: SEGV on unknown address 0x000000000000 (pc 0x7fd010d8a083 bp 0x7fff90131fe0 sp 0x7fff90131fb8 T244) Step #5: ==244==The signal is caused by a READ memory access. Step #5: ==244==Hint: address points to the zero page. Step #5: #0 0x7fd010d8a083 (/lib/x86_64-linux-gnu/libc.so.6+0x185083) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #1 0x559a718279d2 in memcmp /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerInterceptors.cpp:162:16 Step #5: #2 0x559a71941029 in compare /usr/local/bin/../include/c++/v1/__string/char_traits.h:125:14 Step #5: #3 0x559a71941029 in compare >, 0> /usr/local/bin/../include/c++/v1/string:1993:24 Step #5: #4 0x559a71941029 in compare /usr/local/bin/../include/c++/v1/string:1985:12 Step #5: #5 0x559a71941029 in operator<, std::__1::allocator > /usr/local/bin/../include/c++/v1/string:3644:16 Step #5: #6 0x559a71941029 in operator() /usr/local/bin/../include/c++/v1/__functional/operations.h:357:16 Step #5: #7 0x559a71941029 in operator() /usr/local/bin/../include/c++/v1/map:649:12 Step #5: #8 0x559a71941029 in __lower_bound, std::__1::allocator > > /usr/local/bin/../include/c++/v1/__tree:2123:10 Step #5: #9 0x559a71941029 in std::__1::__tree_iterator, std::__1::allocator>, std::__1::shared_ptr>, std::__1::__tree_node, std::__1::allocator>, std::__1::shared_ptr>, void*>*, long> std::__1::__tree, std::__1::allocator>, std::__1::shared_ptr>, std::__1::__map_value_compare, std::__1::allocator>, std::__1::pair, std::__1::allocator> const, std::__1::shared_ptr>, std::__1::less, std::__1::allocator>>, true>, std::__1::allocator, std::__1::allocator> const, std::__1::shared_ptr>>>::find, std::__1::allocator>>(std::__1::basic_string, std::__1::allocator> const&) /usr/local/bin/../include/c++/v1/__tree:2066:18 Step #5: #10 0x559a7193cd72 in find /usr/local/bin/../include/c++/v1/map:1246:77 Step #5: #11 0x559a7193cd72 in OpenBabel::ChemKinFormat::CheckSpecies(std::__1::basic_string, std::__1::allocator>&, std::__1::basic_string, std::__1::allocator>&, bool) /src/openbabel/src/formats/chemkinformat.cpp:659:35 Step #5: #12 0x559a7193b63c in OpenBabel::ChemKinFormat::ReadReactionQualifierLines(std::__1::basic_istream>&, OpenBabel::OBReaction*) /src/openbabel/src/formats/chemkinformat.cpp:639:34 Step #5: #13 0x559a719374b1 in OpenBabel::ChemKinFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/chemkinformat.cpp:207:8 Step #5: #14 0x559a7193fd2b in OpenBabel::ChemKinFormat::ReadChemObject(OpenBabel::OBConversion*) /src/openbabel/src/formats/chemkinformat.cpp:123:14 Step #5: #15 0x559a71859564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #16 0x559a718590d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #17 0x559a71854565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #18 0x559a717ac69d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #19 0x559a717b5c38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #20 0x559a7179d139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #21 0x559a717c8e12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #22 0x7fd010c29082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #23 0x559a717904fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: memcmp--compare Step #5: ==244==Register values: Step #5: rax = 0x000000000000004d rbx = 0x0000559a7453ca41 rcx = 0x0000559a728e42f8 rdx = 0x0000000000000001 Step #5: rdi = 0x0000559a7453ca41 rsi = 0x0000000000000000 rbp = 0x00007fff90131fe0 rsp = 0x00007fff90131fb8 Step #5: r8 = 0x0000000000000000 r9 = 0x0000000000000001 r10 = 0x0000000000000000 r11 = 0x00007fd010da13c0 Step #5: r12 = 0x0000559a71e9efd0 r13 = 0x0000559a7453ca20 r14 = 0x0000000000000000 r15 = 0x0000000000000001 Step #5: UndefinedBehaviorSanitizer can not provide additional info. Step #5: SUMMARY: UndefinedBehaviorSanitizer: SEGV (/lib/x86_64-linux-gnu/libc.so.6+0x185083) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: ==244==ABORTING Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: artifact_prefix='./'; Test unit written to ./crash-90f8e53ed44998224c0d4cf35abcc377af009c3f Step #5: MERGE-OUTER: attempt 17 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1335853208 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/90f8e53ed44998224c0d4cf35abcc377af009c3f' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 10002 processed earlier; will process 1079 files now Step #5: #1 pulse exec/s: 0 rss: 35Mb Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '5' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: #2 pulse exec/s: 0 rss: 36Mb Step #5: #4 pulse exec/s: 0 rss: 36Mb Step #5: #8 pulse exec/s: 0 rss: 36Mb Step #5: #16 pulse exec/s: 0 rss: 36Mb Step #5: WARNING: element number given in 3rd column does not agree with element name on 29 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'x' Step #5: I: identified residue wrt insertion code: 'x' Step #5: I: identified residue wrt insertion code: 'ð' Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: Not a valid output format#32 pulse exec/s: 0 rss: 37Mb Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: #64 pulse exec/s: 0 rss: 38Mb Step #5: I: identified residue wrt insertion code: '1' Step #5: I: identified residue wrt insertion code: '1' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '1' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '1' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '1' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '~' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Not a valid output format Wrong number of coordinates! Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: Not a valid output format#128 pulse exec/s: 0 rss: 67Mb Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: ',' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: Not a valid output format#256 pulse exec/s: 0 rss: 67Mb Step #5: I: identified residue wrt insertion code: 'a' Step #5: Not a valid output formatWARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'f' Step #5: I: identified residue wrt insertion code: '!' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: Not a valid output formatI: identified residue wrt insertion code: 'Á' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: 'v' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Á' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: 'p' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '5' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '5' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'x' Step #5: I: identified residue wrt insertion code: 'x' Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'x' Step #5: I: identified residue wrt insertion code: 'ð' Step #5: I: identified residue wrt insertion code: 'J' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'x' Step #5: I: identified residue wrt insertion code: 'ð' Step #5: Not a valid output format Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: ALARM: working on the last Unit for 101 seconds Step #5: and the timeout value is 100 (use -timeout=N to change) Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: artifact_prefix='./'; Test unit written to ./timeout-133819f1382b6f795e83d729f2d6cc1f4acf9bfb Step #5: ==248== ERROR: libFuzzer: timeout after 101 seconds Step #5: #0 0x56221ab2fee4 in __sanitizer_print_stack_trace /src/llvm-project/compiler-rt/lib/ubsan/ubsan_diag_standalone.cpp:31:3 Step #5: #1 0x56221aaa4468 in fuzzer::PrintStackTrace() /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerUtil.cpp:210:5 Step #5: #2 0x56221aa86f3d in fuzzer::Fuzzer::AlarmCallback() /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:304:5 Step #5: #3 0x7f252382f41f (/lib/x86_64-linux-gnu/libpthread.so.0+0x1441f) (BuildId: 9753720502573b97dbac595b61fd72c2df18e078) Step #5: #4 0x56221ad4d29b in GetSize /src/openbabel/include/openbabel/bitvec.h Step #5: #5 0x56221ad4d29b in OpenBabel::OBBitVec::operator|=(OpenBabel::OBBitVec const&) /src/openbabel/src/bitvec.cpp:424:32 Step #5: #6 0x56221adc8a2c in OpenBabel::OBGraphSymPrivate::GetGTDVector(std::__1::vector>&) /src/openbabel/src/graphsym.cpp:245:14 Step #5: #7 0x56221adc8dc9 in OpenBabel::OBGraphSymPrivate::GetGIVector(std::__1::vector>&) /src/openbabel/src/graphsym.cpp:302:5 Step #5: #8 0x56221adc9ef9 in OpenBabel::OBGraphSymPrivate::CalculateSymmetry(std::__1::vector>&) /src/openbabel/src/graphsym.cpp:555:5 Step #5: #9 0x56221ad1d341 in FindSymmetry /src/openbabel/src/stereo/perception.cpp:1835:14 Step #5: #10 0x56221ad1d341 in OpenBabel::StereoFrom3D(OpenBabel::OBMol*, bool) /src/openbabel/src/stereo/perception.cpp:2078:50 Step #5: #11 0x56221ad1d0c7 in OpenBabel::PerceiveStereo(OpenBabel::OBMol*, bool) /src/openbabel/src/stereo/perception.cpp:83:9 Step #5: #12 0x56221ab5dc69 in OpenBabel::CreateCansmiString(OpenBabel::OBMol&, std::__1::basic_string, std::__1::allocator>&, OpenBabel::OBBitVec&, OpenBabel::OBConversion*) /src/openbabel/src/formats/smilesformat.cpp:4071:7 Step #5: #13 0x56221ab5e89d in OpenBabel::SMIBaseFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/smilesformat.cpp:4217:7 Step #5: #14 0x56221ae77d01 in OpenBabel::OBMoleculeFormat::WriteChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:173:26 Step #5: #15 0x56221ab35764 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:604:40 Step #5: #16 0x56221ab350d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #17 0x56221ab30565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #18 0x56221aa8869d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #19 0x56221aa91c38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #20 0x56221aa79139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #21 0x56221aaa4e12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #22 0x7f252360a082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #23 0x56221aa6c4fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: __sanitizer_print_stack_trace--fuzzer::PrintStackTrace()--fuzzer::Fuzzer::AlarmCallback() Step #5: SUMMARY: libFuzzer: timeout Step #5: MERGE-OUTER: attempt 18 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1437933833 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/regressions/133819f1382b6f795e83d729f2d6cc1f4acf9bfb' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 10350 processed earlier; will process 731 files now Step #5: #1 pulse exec/s: 0 rss: 33Mb Step #5: #2 pulse exec/s: 0 rss: 34Mb Step #5: #4 pulse exec/s: 0 rss: 34Mb Step #5: #8 pulse exec/s: 0 rss: 34Mb Step #5: #16 pulse exec/s: 0 rss: 35Mb Step #5: #32 pulse exec/s: 0 rss: 35Mb Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: #64 pulse exec/s: 0 rss: 36Mb Step #5: Invalid format in geometry specification: There appears to be more than one atom label specified! Step #5: WARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'ÿ' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: 'ÿ' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: Not a valid output formatWARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 6 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 6 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Not a valid output format#128 pulse exec/s: 0 rss: 129Mb Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 12 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 5 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Not a valid output formatWARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: #256 pulse exec/s: 0 rss: 129Mb Step #5: Not a valid output formatNot a valid output formatNot a valid output formatNot a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 6 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 12 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 3 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 25 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 5 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Not a valid output formatWARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 5 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 22 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 6 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 1189 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 69 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: I: identified residue wrt insertion code: 'Ä' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Step #5: Step #5: WARNING: element number given in 3rd column does not agree with element name on 5 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 24 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 22 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: #512 pulse exec/s: 512 rss: 129Mb Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 22 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 5 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 21 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 22 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 12 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 14 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 5 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 22 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 10 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 12 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 19 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 22 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 12 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 23 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: I: identified residue wrt insertion code: '' Step #5: WARNING: element number given in 3rd column does not agree with element name on 8 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 11 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 11 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: WARNING: element number given in 3rd column does not agree with element name on 5 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 24 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 22 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 12 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 22 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 7 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 4 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Step #5: Step #5: HIER Step #5: Not a valid input format Step #5: Step #5: Not a valid output formatI: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' 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I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: 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identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' 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identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '>' Step #5: I: identified residue wrt insertion code: '€' Step #5: WARNING: element number given in 3rd column does not agree with element name on 2 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: WARNING: element number given in 3rd column does not agree with element name on 1 lines. Step #5: Difference between expected nuclear charge and given element number saved to atom property 'ecp'. Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! 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Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: Wrong number of coordinates! Step #5: ALARM: working on the last Unit for 147 seconds Step #5: and the timeout value is 100 (use -timeout=N to change) Step #5: MS: 0 ; base unit: 0000000000000000000000000000000000000000 Step #5: artifact_prefix='./'; Test unit written to ./timeout-5e284aafcfef5203d9c3ff670d8031c8c00d1a7f Step #5: ==252== ERROR: libFuzzer: timeout after 147 seconds Step #5: #0 0x556fc9c46ee4 in __sanitizer_print_stack_trace /src/llvm-project/compiler-rt/lib/ubsan/ubsan_diag_standalone.cpp:31:3 Step #5: #1 0x556fc9bbb468 in fuzzer::PrintStackTrace() /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerUtil.cpp:210:5 Step #5: #2 0x556fc9b9df3d in fuzzer::Fuzzer::AlarmCallback() /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:304:5 Step #5: #3 0x7fd25a75f41f (/lib/x86_64-linux-gnu/libpthread.so.0+0x1441f) (BuildId: 9753720502573b97dbac595b61fd72c2df18e078) Step #5: #4 0x556fc9fbaf4f (out/libfuzzer-coverage-x86_64/fuzz_convert+0x492f4f) Step #5: #5 0x556fc9d1bbbb in getline /usr/local/bin/../include/c++/v1/istream:289:12 Step #5: #6 0x556fc9d1bbbb in OpenBabel::ACRFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*) /src/openbabel/src/formats/acrformat.cpp:108:11 Step #5: #7 0x556fc9f8e23b in OpenBabel::OBMoleculeFormat::ReadChemObjectImpl(OpenBabel::OBConversion*, OpenBabel::OBFormat*) /src/openbabel/src/obmolecformat.cpp:101:18 Step #5: #8 0x556fc9c4c564 in OpenBabel::OBConversion::Convert() /src/openbabel/src/obconversion.cpp:542:30 Step #5: #9 0x556fc9c4c0d6 in OpenBabel::OBConversion::Convert(std::__1::basic_istream>*, std::__1::basic_ostream>*) /src/openbabel/src/obconversion.cpp:478:17 Step #5: #10 0x556fc9c47565 in LLVMFuzzerTestOneInput /src/openbabel/test/fuzz/fuzz_convert.cpp:38:14 Step #5: #11 0x556fc9b9f69d in fuzzer::Fuzzer::ExecuteCallback(unsigned char const*, unsigned long) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerLoop.cpp:619:13 Step #5: #12 0x556fc9ba8c38 in fuzzer::Fuzzer::CrashResistantMergeInternalStep(std::__Fuzzer::basic_string, std::__Fuzzer::allocator> const&, bool) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMerge.cpp:239:5 Step #5: #13 0x556fc9b90139 in fuzzer::FuzzerDriver(int*, char***, int (*)(unsigned char const*, unsigned long)) /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerDriver.cpp:890:8 Step #5: #14 0x556fc9bbbe12 in main /src/llvm-project/compiler-rt/lib/fuzzer/FuzzerMain.cpp:20:10 Step #5: #15 0x7fd25a53a082 in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x24082) (BuildId: 5792732f783158c66fb4f3756458ca24e46e827d) Step #5: #16 0x556fc9b834fd in _start (out/libfuzzer-coverage-x86_64/fuzz_convert+0x5b4fd) Step #5: Step #5: DEDUP_TOKEN: __sanitizer_print_stack_trace--fuzzer::PrintStackTrace()--fuzzer::Fuzzer::AlarmCallback() Step #5: SUMMARY: libFuzzer: timeout Step #5: MERGE-OUTER: attempt 19 Step #5: INFO: Running with entropic power schedule (0xFF, 100). Step #5: INFO: Seed: 1591118709 Step #5: INFO: -max_len is not provided; libFuzzer will not generate inputs larger than 1048576 bytes Step #5: MERGE-INNER: using the control file '/tmp/libFuzzerTemp.Merge64.txt' Step #5: MERGE-INNER: '/corpus/fuzz_convert/7de3411a120a12ef8a4d5ba7a7682a06967ea1ce' caused a failure at the previous merge step Step #5: MERGE-INNER: 11081 total files; 11071 processed earlier; will process 10 files now Step #5: HIER Step #5: Not a valid input format#1 pulse exec/s: 0 rss: 35Mb Step #5: Not a valid input format#2 pulse exec/s: 0 rss: 37Mb Step #5: #4 pulse exec/s: 0 rss: 41Mb Step #5: #8 pulse exec/s: 0 rss: 41Mb Step #5: #10 DONE exec/s: 0 rss: 41Mb Step #5: MERGE-OUTER: successful in 19 attempt(s) Step #5: MERGE-OUTER: the control file has 1058826 bytes Step #5: MERGE-OUTER: consumed 0Mb (34Mb rss) to parse the control file Step #5: MERGE-OUTER: 0 new files with 0 new features added; 0 new coverage edges Step #5: [2026-05-12 06:57:03,500 INFO] Finding shared libraries for targets (if any). Step #5: [2026-05-12 06:57:03,513 INFO] Finished finding shared libraries for targets. Step #5: Coverage error, creating log file: /workspace/out/libfuzzer-coverage-x86_64/fuzzer_stats/fuzz_convert_error.log Step #5: [2026-05-12 06:57:03,815 INFO] Finding shared libraries for targets (if any). Step #5: [2026-05-12 06:57:03,840 INFO] Finished finding shared libraries for targets. Step #5: [2026-05-12 06:57:04,370 DEBUG] Finished generating per-file code coverage summary. Step #5: [2026-05-12 06:57:04,370 DEBUG] Generating file view html index file as: "/workspace/out/libfuzzer-coverage-x86_64/report/linux/file_view_index.html". Step #5: [2026-05-12 06:57:04,388 DEBUG] Finished generating file view html index file. Step #5: [2026-05-12 06:57:04,388 DEBUG] Calculating per-directory coverage summary. Step #5: [2026-05-12 06:57:04,390 DEBUG] Finished calculating per-directory coverage summary. Step #5: [2026-05-12 06:57:04,390 DEBUG] Writing per-directory coverage html reports. Step #5: [2026-05-12 06:57:04,545 DEBUG] Finished writing per-directory coverage html reports. Step #5: [2026-05-12 06:57:04,546 DEBUG] Generating directory view html index file as: "/workspace/out/libfuzzer-coverage-x86_64/report/linux/directory_view_index.html". Step #5: [2026-05-12 06:57:04,546 DEBUG] Finished generating directory view html index file. Step #5: [2026-05-12 06:57:04,546 INFO] Index file for html report is generated as: "file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/index.html". Step #5: [2026-05-12 06:57:04,870 DEBUG] Finished generating per-file code coverage summary. Step #5: [2026-05-12 06:57:04,870 DEBUG] Generating file view html index file as: "/workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_obconversion_sdf/linux/file_view_index.html". Step #5: [2026-05-12 06:57:04,887 DEBUG] Finished generating file view html index file. Step #5: [2026-05-12 06:57:04,888 DEBUG] Calculating per-directory coverage summary. Step #5: [2026-05-12 06:57:04,890 DEBUG] Finished calculating per-directory coverage summary. Step #5: [2026-05-12 06:57:04,890 DEBUG] Writing per-directory coverage html reports. Step #5: [2026-05-12 06:57:05,048 DEBUG] Finished writing per-directory coverage html reports. Step #5: [2026-05-12 06:57:05,048 DEBUG] Generating directory view html index file as: "/workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_obconversion_sdf/linux/directory_view_index.html". Step #5: [2026-05-12 06:57:05,048 DEBUG] Finished generating directory view html index file. Step #5: [2026-05-12 06:57:05,049 INFO] Index file for html report is generated as: "file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_obconversion_sdf/linux/index.html". Step #5: [2026-05-12 06:57:05,375 DEBUG] Finished generating per-file code coverage summary. Step #5: [2026-05-12 06:57:05,375 DEBUG] Generating file view html index file as: "/workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_obconversion_smiles/linux/file_view_index.html". Step #5: [2026-05-12 06:57:05,392 DEBUG] Finished generating file view html index file. Step #5: [2026-05-12 06:57:05,392 DEBUG] Calculating per-directory coverage summary. Step #5: [2026-05-12 06:57:05,394 DEBUG] Finished calculating per-directory coverage summary. Step #5: [2026-05-12 06:57:05,394 DEBUG] Writing per-directory coverage html reports. Step #5: [2026-05-12 06:57:05,549 DEBUG] Finished writing per-directory coverage html reports. Step #5: [2026-05-12 06:57:05,549 DEBUG] Generating directory view html index file as: "/workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_obconversion_smiles/linux/directory_view_index.html". Step #5: [2026-05-12 06:57:05,549 DEBUG] Finished generating directory view html index file. Step #5: [2026-05-12 06:57:05,549 INFO] Index file for html report is generated as: "file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_obconversion_smiles/linux/index.html". Step #5: [2026-05-12 06:57:05,870 DEBUG] Finished generating per-file code coverage summary. Step #5: [2026-05-12 06:57:05,870 DEBUG] Generating file view html index file as: "/workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/file_view_index.html". Step #5: [2026-05-12 06:57:05,886 DEBUG] Finished generating file view html index file. Step #5: [2026-05-12 06:57:05,886 DEBUG] Calculating per-directory coverage summary. Step #5: [2026-05-12 06:57:05,889 DEBUG] Finished calculating per-directory coverage summary. Step #5: [2026-05-12 06:57:05,889 DEBUG] Writing per-directory coverage html reports. Step #5: [2026-05-12 06:57:06,040 DEBUG] Finished writing per-directory coverage html reports. Step #5: [2026-05-12 06:57:06,041 DEBUG] Generating directory view html index file as: "/workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/directory_view_index.html". Step #5: [2026-05-12 06:57:06,041 DEBUG] Finished generating directory view html index file. Step #5: [2026-05-12 06:57:06,041 INFO] Index file for html report is generated as: "file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/index.html". Finished Step #5 Starting Step #6 Step #6: Pulling image: gcr.io/cloud-builders/gsutil Step #6: Using default tag: latest Step #6: latest: Pulling from cloud-builders/gsutil Step #6: 70792468e643: Already exists Step #6: 85913bd67a1d: Already exists Step #6: c12613b098c4: Already exists Step #6: 71122369eceb: Already exists Step #6: 10a88f02beca: Already exists Step #6: fba974427a06: Already exists Step #6: 1a6006d6913b: Pulling fs layer Step #6: 56476e97aa50: Pulling fs layer Step #6: 56476e97aa50: Verifying Checksum Step #6: 56476e97aa50: Download complete Step #6: 1a6006d6913b: Download complete Step #6: 1a6006d6913b: Pull complete Step #6: 56476e97aa50: Pull complete Step #6: Digest: sha256:6f2cbf0163c6c3b653f447c3e21fc30eacaa4b8d33ef7f18c9927e53732523c3 Step #6: Status: Downloaded newer image for gcr.io/cloud-builders/gsutil:latest Step #6: gcr.io/cloud-builders/gsutil:latest Step #6: CommandException: 1 files/objects could not be removed. Finished Step #6 Starting Step #7 Step #7: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #7: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/control.js [Content-Type=text/javascript]... Step #7: / [0/283 files][ 0.0 B/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/style.css [Content-Type=text/css]... Step #7: / [0/283 files][ 0.0 B/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/directory_view_index.html [Content-Type=text/html]... Step #7: / [0/283 files][ 5.5 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/summary.json [Content-Type=application/json]... Step #7: / [0/283 files][ 5.5 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/index.html [Content-Type=text/html]... Step #7: / [0/283 files][ 5.5 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/report.html [Content-Type=text/html]... Step #7: / [0/283 files][ 5.7 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/file_view_index.html [Content-Type=text/html]... Step #7: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/report.html [Content-Type=text/html]... Step #7: / [0/283 files][116.9 KiB/ 32.3 MiB] 0% Done / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/report.html [Content-Type=text/html]... Step #7: / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/test/report.html [Content-Type=text/html]... Step #7: / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/build/include/openbabel/babelconfig.h.html [Content-Type=text/html]... Step #7: / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/test/fuzz/fuzz_convert.cpp.html [Content-Type=text/html]... Step #7: / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/test/fuzz/report.html [Content-Type=text/html]... Step #7: / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/test/fuzz/fuzz_obconversion.cpp.html [Content-Type=text/html]... Step #7: / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/test/fuzz/FuzzedDataProvider.h.html [Content-Type=text/html]... Step #7: / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/src/rotamer.cpp.html [Content-Type=text/html]... Step #7: / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/src/format.cpp.html [Content-Type=text/html]... Step #7: / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/src/mcdlutil.cpp.html [Content-Type=text/html]... Step #7: / [0/283 files][117.1 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/src/obfunctions.cpp.html [Content-Type=text/html]... Step #7: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/src/oberror.cpp.html [Content-Type=text/html]... Step #7: / [0/283 files][121.4 KiB/ 32.3 MiB] 0% Done / [0/283 files][121.4 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/src/graphsym.cpp.html [Content-Type=text/html]... Step #7: / [0/283 files][125.7 KiB/ 32.3 MiB] 0% Done / [1/283 files][125.7 KiB/ 32.3 MiB] 0% Done / [2/283 files][125.7 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/src/chargemodel.cpp.html [Content-Type=text/html]... Step #7: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/src/bitvec.cpp.html [Content-Type=text/html]... Step #7: / [2/283 files][125.7 KiB/ 32.3 MiB] 0% Done / [2/283 files][125.7 KiB/ 32.3 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report/linux/src/openbabel/src/molchrg.cpp.html [Content-Type=text/html]... 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Finished Step #7 Starting Step #8 Step #8: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #8: CommandException: 1 files/objects could not be removed. Finished Step #8 Starting Step #9 Step #9: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #9: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_obconversion_sdf/control.js [Content-Type=text/javascript]... Step #9: / [0/844 files][ 0.0 B/ 97.7 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_obconversion_sdf/style.css [Content-Type=text/css]... Step #9: / [0/844 files][ 0.0 B/ 97.7 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_obconversion_sdf/linux/directory_view_index.html [Content-Type=text/html]... 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Step #9: / [783/844 files][ 95.2 MiB/ 97.7 MiB] 97% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/obmolecformat.h.html [Content-Type=text/html]... Step #9: / [783/844 files][ 95.2 MiB/ 97.7 MiB] 97% Done / [783/844 files][ 95.2 MiB/ 97.7 MiB] 97% Done / [784/844 files][ 95.2 MiB/ 97.7 MiB] 97% Done / [785/844 files][ 95.3 MiB/ 97.7 MiB] 97% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/phmodel.h.html [Content-Type=text/html]... Step #9: / [786/844 files][ 95.3 MiB/ 97.7 MiB] 97% Done / [786/844 files][ 95.3 MiB/ 97.7 MiB] 97% Done / [787/844 files][ 95.3 MiB/ 97.7 MiB] 97% Done / [788/844 files][ 95.3 MiB/ 97.7 MiB] 97% Done / [789/844 files][ 95.7 MiB/ 97.7 MiB] 97% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/bond.h.html [Content-Type=text/html]... Step #9: / [789/844 files][ 95.7 MiB/ 97.7 MiB] 97% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/kinetics.h.html [Content-Type=text/html]... Step #9: / [790/844 files][ 96.0 MiB/ 97.7 MiB] 98% Done / [790/844 files][ 96.0 MiB/ 97.7 MiB] 98% Done / [791/844 files][ 96.0 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/bitvec.h.html [Content-Type=text/html]... Step #9: / [792/844 files][ 96.1 MiB/ 97.7 MiB] 98% Done / [792/844 files][ 96.2 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/molchrg.h.html [Content-Type=text/html]... Step #9: / [792/844 files][ 96.2 MiB/ 97.7 MiB] 98% Done / [793/844 files][ 96.2 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/internalcoord.h.html [Content-Type=text/html]... Step #9: / [794/844 files][ 96.2 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/reaction.h.html [Content-Type=text/html]... Step #9: / [794/844 files][ 96.2 MiB/ 97.7 MiB] 98% Done / [794/844 files][ 96.2 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/text.h.html [Content-Type=text/html]... Step #9: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/typer.h.html [Content-Type=text/html]... Step #9: / [794/844 files][ 96.2 MiB/ 97.7 MiB] 98% Done / [794/844 files][ 96.2 MiB/ 97.7 MiB] 98% Done / [795/844 files][ 96.2 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/op.h.html [Content-Type=text/html]... Step #9: / [795/844 files][ 96.2 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/query.h.html [Content-Type=text/html]... Step #9: / [795/844 files][ 96.3 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/ring.h.html [Content-Type=text/html]... Step #9: / [795/844 files][ 96.3 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/lineend.h.html [Content-Type=text/html]... Step #9: / [795/844 files][ 96.3 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/obiter.h.html [Content-Type=text/html]... Step #9: / [795/844 files][ 96.3 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/base.h.html [Content-Type=text/html]... Step #9: / [795/844 files][ 96.3 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/math/matrix3x3.h.html [Content-Type=text/html]... Step #9: / [795/844 files][ 96.3 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/obconversion.h.html [Content-Type=text/html]... Step #9: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/math/spacegroup.h.html [Content-Type=text/html]... Step #9: / [795/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done / [795/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/math/transform3d.h.html [Content-Type=text/html]... Step #9: / [795/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/math/report.html [Content-Type=text/html]... Step #9: / [796/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done / [796/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/math/vector3.h.html [Content-Type=text/html]... Step #9: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/stereo/tetraplanar.h.html [Content-Type=text/html]... Step #9: / [796/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done / [796/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done / [797/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/stereo/report.html [Content-Type=text/html]... Step #9: / [798/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done / [798/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/stereo/cistrans.h.html [Content-Type=text/html]... Step #9: / [798/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/stereo/tetrahedral.h.html [Content-Type=text/html]... Step #9: / [798/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/stereo/squareplanar.h.html [Content-Type=text/html]... Step #9: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/stereo/stereo.h.html [Content-Type=text/html]... Step #9: / [798/844 files][ 96.4 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/stereo/tetranonplanar.h.html [Content-Type=text/html]... Step #9: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/depict/painter.h.html [Content-Type=text/html]... Step #9: / [798/844 files][ 96.5 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/include/openbabel/depict/report.html [Content-Type=text/html]... Step #9: / [798/844 files][ 96.6 MiB/ 97.7 MiB] 98% Done / [798/844 files][ 96.6 MiB/ 97.7 MiB] 98% Done / [798/844 files][ 96.6 MiB/ 97.7 MiB] 98% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/data/chemdrawcdx.h.html [Content-Type=text/html]... Step #9: Copying file:///workspace/out/libfuzzer-coverage-x86_64/report_target/fuzz_convert/linux/src/openbabel/data/report.html [Content-Type=text/html]... Step #9: / [798/844 files][ 96.7 MiB/ 97.7 MiB] 98% Done / [798/844 files][ 96.7 MiB/ 97.7 MiB] 98% Done / [799/844 files][ 96.7 MiB/ 97.7 MiB] 98% Done / [800/844 files][ 96.7 MiB/ 97.7 MiB] 98% Done / [801/844 files][ 96.8 MiB/ 97.7 MiB] 99% Done / [802/844 files][ 96.8 MiB/ 97.7 MiB] 99% Done / [803/844 files][ 96.9 MiB/ 97.7 MiB] 99% Done / [804/844 files][ 97.0 MiB/ 97.7 MiB] 99% Done / [805/844 files][ 97.0 MiB/ 97.7 MiB] 99% Done / [806/844 files][ 97.4 MiB/ 97.7 MiB] 99% Done / [807/844 files][ 97.5 MiB/ 97.7 MiB] 99% Done / [808/844 files][ 97.5 MiB/ 97.7 MiB] 99% Done / [809/844 files][ 97.5 MiB/ 97.7 MiB] 99% Done / [810/844 files][ 97.5 MiB/ 97.7 MiB] 99% Done / [811/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [812/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [813/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [814/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [815/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [816/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [817/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [818/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [819/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [820/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [821/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [822/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [823/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [824/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [825/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [826/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [827/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [828/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [829/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [830/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [831/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [832/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [833/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [834/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [835/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [836/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [837/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [838/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [839/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [840/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [841/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [842/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [843/844 files][ 97.7 MiB/ 97.7 MiB] 99% Done / [844/844 files][ 97.7 MiB/ 97.7 MiB] 100% Done Step #9: Operation completed over 844 objects/97.7 MiB. Finished Step #9 Starting Step #10 Step #10: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #10: CommandException: 1 files/objects could not be removed. Finished Step #10 Starting Step #11 Step #11: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #11: Copying file:///workspace/out/libfuzzer-coverage-x86_64/fuzzer_stats/fuzz_convert.json [Content-Type=application/json]... Step #11: / [0/5 files][ 0.0 B/327.8 KiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/fuzzer_stats/fuzz_obconversion_sdf.json [Content-Type=application/json]... Step #11: / [0/5 files][ 0.0 B/327.8 KiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/fuzzer_stats/fuzz_obconversion_smiles.json [Content-Type=application/json]... Step #11: / [0/5 files][ 0.0 B/327.8 KiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/fuzzer_stats/coverage_targets.txt [Content-Type=text/plain]... Step #11: / [0/5 files][108.6 KiB/327.8 KiB] 33% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/fuzzer_stats/fuzz_convert_error.log [Content-Type=application/octet-stream]... Step #11: / [0/5 files][108.6 KiB/327.8 KiB] 33% Done / [1/5 files][327.8 KiB/327.8 KiB] 99% Done / [2/5 files][327.8 KiB/327.8 KiB] 99% Done / [3/5 files][327.8 KiB/327.8 KiB] 99% Done / [4/5 files][327.8 KiB/327.8 KiB] 99% Done / [5/5 files][327.8 KiB/327.8 KiB] 100% Done Step #11: Operation completed over 5 objects/327.8 KiB. Finished Step #11 Starting Step #12 Step #12: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #12: CommandException: 1 files/objects could not be removed. Finished Step #12 Starting Step #13 Step #13: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #13: Copying file:///workspace/out/libfuzzer-coverage-x86_64/textcov_reports/fuzz_obconversion_sdf.covreport [Content-Type=application/octet-stream]... Step #13: / [0/3 files][ 0.0 B/ 1.4 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/textcov_reports/fuzz_convert.covreport [Content-Type=application/octet-stream]... Step #13: / [0/3 files][ 0.0 B/ 1.4 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/textcov_reports/fuzz_obconversion_smiles.covreport [Content-Type=application/octet-stream]... Step #13: / [0/3 files][ 0.0 B/ 1.4 MiB] 0% Done / [1/3 files][ 1.4 MiB/ 1.4 MiB] 99% Done / [2/3 files][ 1.4 MiB/ 1.4 MiB] 99% Done / [3/3 files][ 1.4 MiB/ 1.4 MiB] 100% Done Step #13: Operation completed over 3 objects/1.4 MiB. Finished Step #13 Starting Step #14 Step #14: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #14: CommandException: 1 files/objects could not be removed. Finished Step #14 Starting Step #15 Step #15: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #15: Copying file:///workspace/out/libfuzzer-coverage-x86_64/logs/fuzz_obconversion_sdf_error.log [Content-Type=application/octet-stream]... Step #15: / [0/5 files][ 0.0 B/ 61.8 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/logs/fuzz_obconversion_sdf.log [Content-Type=application/octet-stream]... Step #15: / [0/5 files][ 0.0 B/ 61.8 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/logs/fuzz_obconversion_smiles_error.log [Content-Type=application/octet-stream]... Step #15: / [0/5 files][ 0.0 B/ 61.8 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/logs/fuzz_convert.log [Content-Type=application/octet-stream]... Step #15: / [0/5 files][ 0.0 B/ 61.8 MiB] 0% Done Copying file:///workspace/out/libfuzzer-coverage-x86_64/logs/fuzz_obconversion_smiles.log [Content-Type=application/octet-stream]... Step #15: / [0/5 files][ 0.0 B/ 61.8 MiB] 0% Done / [1/5 files][470.4 KiB/ 61.8 MiB] 0% Done / [2/5 files][ 5.4 MiB/ 61.8 MiB] 8% Done / [3/5 files][ 10.3 MiB/ 61.8 MiB] 16% Done / [4/5 files][ 42.3 MiB/ 61.8 MiB] 68% Done / [5/5 files][ 61.8 MiB/ 61.8 MiB] 100% Done - Step #15: Operation completed over 5 objects/61.8 MiB. Finished Step #15 Starting Step #16 Step #16: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #16: Copying file:///workspace/srcmap.json [Content-Type=application/json]... Step #16: / [0 files][ 0.0 B/ 160.0 B] / [1 files][ 160.0 B/ 160.0 B] Step #16: Operation completed over 1 objects/160.0 B. Finished Step #16 Starting Step #17 Step #17: Already have image (with digest): gcr.io/cloud-builders/curl Step #17: % Total % Received % Xferd Average Speed Time Time Time Current Step #17: Dload Upload Total Spent Left Speed Step #17: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 315 0 0 100 315 0 1451 --:--:-- --:--:-- --:--:-- 1465 Finished Step #17 PUSH DONE