starting build "c028c710-ded0-4ec3-841b-4c3dfa02d7fc" FETCHSOURCE BUILD Starting Step #0 Step #0: Already have image (with digest): gcr.io/cloud-builders/git Step #0: Cloning into 'oss-fuzz'... Finished Step #0 Starting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065" Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Already have image (with digest): gcr.io/cloud-builders/docker Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Sending build context to Docker daemon 8.704kB Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Step 1/6 : FROM gcr.io/oss-fuzz-base/base-builder Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": latest: Pulling from oss-fuzz-base/base-builder Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b549f31133a9: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6e628c8ef21f: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f53ab3868c1c: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": a55801351b59: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 3bb5606c96f9: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 04679461c0a4: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6202956b2fc8: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6de59df1d969: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": e94fca21036a: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f06e7a843c98: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 2e63cbce29d6: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 8fce8f94211f: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c26bd18729a4: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 1425e2da3d0f: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 24218bda6367: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b31a426d2518: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 84cf1ab1e9f9: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 2c2b7d72eac9: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 710430df408b: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 26ec0ac61159: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 557ca0d2b5c7: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 986c94e54976: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": cbac95d8da00: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5a7a3f93fe73: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 7a93d1a7fb44: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": dac0759625b9: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": d1cb5c7641a2: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 02eb0541e91a: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 52ae1ac2675c: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5129b6a32636: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f712ebbbd8d9: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 0df20a1baa3e: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6dd08d591949: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 2c2b7d72eac9: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c9de98ed230e: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c4d8394d753c: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 710430df408b: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5da0bdfffdca: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 08d89138e853: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 26ec0ac61159: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b9b3a87688da: Pulling fs layer Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 557ca0d2b5c7: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 986c94e54976: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 7a93d1a7fb44: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": dac0759625b9: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": d1cb5c7641a2: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 02eb0541e91a: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": cbac95d8da00: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 52ae1ac2675c: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5129b6a32636: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5a7a3f93fe73: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 8fce8f94211f: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f712ebbbd8d9: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c26bd18729a4: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 0df20a1baa3e: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 1425e2da3d0f: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 84cf1ab1e9f9: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6dd08d591949: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 24218bda6367: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b31a426d2518: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b9b3a87688da: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5da0bdfffdca: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 08d89138e853: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c9de98ed230e: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c4d8394d753c: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6de59df1d969: Waiting Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f53ab3868c1c: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f53ab3868c1c: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 3bb5606c96f9: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 3bb5606c96f9: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6de59df1d969: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6de59df1d969: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6202956b2fc8: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b549f31133a9: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b549f31133a9: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": a55801351b59: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": a55801351b59: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 2e63cbce29d6: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 2e63cbce29d6: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 8fce8f94211f: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 8fce8f94211f: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 1425e2da3d0f: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 1425e2da3d0f: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c26bd18729a4: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c26bd18729a4: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6e628c8ef21f: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6e628c8ef21f: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b31a426d2518: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b31a426d2518: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 24218bda6367: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 24218bda6367: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 2c2b7d72eac9: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 2c2b7d72eac9: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 84cf1ab1e9f9: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 84cf1ab1e9f9: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f06e7a843c98: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f06e7a843c98: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 710430df408b: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 557ca0d2b5c7: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 557ca0d2b5c7: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 986c94e54976: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 26ec0ac61159: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 26ec0ac61159: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b549f31133a9: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": cbac95d8da00: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 7a93d1a7fb44: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 7a93d1a7fb44: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5a7a3f93fe73: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5a7a3f93fe73: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": dac0759625b9: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": d1cb5c7641a2: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 02eb0541e91a: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 02eb0541e91a: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": e94fca21036a: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": e94fca21036a: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 52ae1ac2675c: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 52ae1ac2675c: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5129b6a32636: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5129b6a32636: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f712ebbbd8d9: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f712ebbbd8d9: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 0df20a1baa3e: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6dd08d591949: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6dd08d591949: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c9de98ed230e: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c9de98ed230e: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5da0bdfffdca: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5da0bdfffdca: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c4d8394d753c: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 08d89138e853: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 08d89138e853: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b9b3a87688da: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b9b3a87688da: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 04679461c0a4: Verifying Checksum Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 04679461c0a4: Download complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6e628c8ef21f: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f53ab3868c1c: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": a55801351b59: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 3bb5606c96f9: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 04679461c0a4: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6202956b2fc8: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6de59df1d969: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": e94fca21036a: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f06e7a843c98: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 2e63cbce29d6: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 8fce8f94211f: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c26bd18729a4: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 1425e2da3d0f: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 24218bda6367: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b31a426d2518: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 84cf1ab1e9f9: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 2c2b7d72eac9: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 710430df408b: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 26ec0ac61159: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 557ca0d2b5c7: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 986c94e54976: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": cbac95d8da00: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5a7a3f93fe73: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 7a93d1a7fb44: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": dac0759625b9: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": d1cb5c7641a2: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 02eb0541e91a: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 52ae1ac2675c: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5129b6a32636: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": f712ebbbd8d9: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 0df20a1baa3e: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 6dd08d591949: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c9de98ed230e: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": c4d8394d753c: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 5da0bdfffdca: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 08d89138e853: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": b9b3a87688da: Pull complete Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Digest: sha256:8b4a73d83374b298a0a771eeec9a1d44ceff3416a678b7d7946303389d022aca Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Status: Downloaded newer image for gcr.io/oss-fuzz-base/base-builder:latest Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": ---> d80a426b7136 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Step 2/6 : RUN apt-get update && apt-get install -y make autoconf automake zlib1g-dev libbz2-dev liblzma-dev libcurl4-gnutls-dev libssl-dev Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": ---> Running in 4f972a8fed46 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:1 http://security.ubuntu.com/ubuntu focal-security InRelease [128 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Hit:2 http://archive.ubuntu.com/ubuntu focal InRelease Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:3 http://archive.ubuntu.com/ubuntu focal-updates InRelease [128 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:4 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [4368 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:5 http://archive.ubuntu.com/ubuntu focal-backports InRelease [128 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:6 http://security.ubuntu.com/ubuntu focal-security/main i386 Packages [1079 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:7 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [4850 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:8 http://archive.ubuntu.com/ubuntu focal-updates/main i386 Packages [1369 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Fetched 12.0 MB in 2s (6787 kB/s) Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Reading package lists... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Reading package lists... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Building dependency tree... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Reading state information... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": make is already the newest version (4.2.1-1.2). Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": make set to manually installed. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": libssl-dev is already the newest version (1.1.1f-1ubuntu2.24). Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": The following additional packages will be installed: Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": bzip2-doc Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Suggested packages: Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": autoconf-archive gnu-standards autoconf-doc libtool gettext libcurl4-doc Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": libssh2-1-dev pkg-config liblzma-doc Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": The following NEW packages will be installed: Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": autoconf automake bzip2-doc libbz2-dev libcurl4-gnutls-dev liblzma-dev Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": zlib1g-dev Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": 0 upgraded, 7 newly installed, 0 to remove and 0 not upgraded. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Need to get 1996 kB of archives. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": After this operation, 6950 kB of additional disk space will be used. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:1 http://archive.ubuntu.com/ubuntu focal/main amd64 autoconf all 2.69-11.1 [321 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:2 http://archive.ubuntu.com/ubuntu focal/main amd64 automake all 1:1.16.1-4ubuntu6 [522 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:3 http://archive.ubuntu.com/ubuntu focal/main amd64 bzip2-doc all 1.0.8-2 [501 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:4 http://archive.ubuntu.com/ubuntu focal/main amd64 libbz2-dev amd64 1.0.8-2 [30.2 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:5 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-gnutls-dev amd64 7.68.0-1ubuntu2.25 [320 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:6 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2ubuntu1.5 [155 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Get:7 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 liblzma-dev amd64 5.2.4-1ubuntu1.1 [147 kB] Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": debconf: delaying package configuration, since apt-utils is not installed Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Fetched 1996 kB in 1s (1853 kB/s) Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Selecting previously unselected package autoconf. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17483 files and directories currently installed.) Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Preparing to unpack .../0-autoconf_2.69-11.1_all.deb ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Unpacking autoconf (2.69-11.1) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Selecting previously unselected package automake. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Preparing to unpack .../1-automake_1%3a1.16.1-4ubuntu6_all.deb ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Unpacking automake (1:1.16.1-4ubuntu6) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Selecting previously unselected package bzip2-doc. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Preparing to unpack .../2-bzip2-doc_1.0.8-2_all.deb ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Unpacking bzip2-doc (1.0.8-2) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Selecting previously unselected package libbz2-dev:amd64. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Preparing to unpack .../3-libbz2-dev_1.0.8-2_amd64.deb ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Unpacking libbz2-dev:amd64 (1.0.8-2) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Selecting previously unselected package libcurl4-gnutls-dev:amd64. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Preparing to unpack .../4-libcurl4-gnutls-dev_7.68.0-1ubuntu2.25_amd64.deb ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Unpacking libcurl4-gnutls-dev:amd64 (7.68.0-1ubuntu2.25) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Selecting previously unselected package zlib1g-dev:amd64. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Preparing to unpack .../5-zlib1g-dev_1%3a1.2.11.dfsg-2ubuntu1.5_amd64.deb ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Unpacking zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu1.5) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Selecting previously unselected package liblzma-dev:amd64. Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Preparing to unpack .../6-liblzma-dev_5.2.4-1ubuntu1.1_amd64.deb ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Unpacking liblzma-dev:amd64 (5.2.4-1ubuntu1.1) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Setting up bzip2-doc (1.0.8-2) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Setting up libcurl4-gnutls-dev:amd64 (7.68.0-1ubuntu2.25) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Setting up autoconf (2.69-11.1) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Setting up liblzma-dev:amd64 (5.2.4-1ubuntu1.1) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu1.5) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Setting up libbz2-dev:amd64 (1.0.8-2) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Setting up automake (1:1.16.1-4ubuntu6) ... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": update-alternatives: warning: skip creation of /usr/share/man/man1/automake.1.gz because associated file /usr/share/man/man1/automake-1.16.1.gz (of link group automake) doesn't exist Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": update-alternatives: warning: skip creation of /usr/share/man/man1/aclocal.1.gz because associated file /usr/share/man/man1/aclocal-1.16.1.gz (of link group automake) doesn't exist Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Removing intermediate container 4f972a8fed46 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": ---> 175c32237e86 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Step 3/6 : RUN git clone --depth 1 --shallow-submodules --recurse-submodules https://github.com/samtools/htslib.git htslib Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": ---> Running in 11a761f8ef19 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Cloning into 'htslib'... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Submodule 'htscodecs' (https://github.com/samtools/htscodecs.git) registered for path 'htscodecs' Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Cloning into '/src/htslib/htscodecs'... Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": From https://github.com/samtools/htscodecs Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": * branch b9fc194f772e45bb0a1f44b08cbf8697a1384bae -> FETCH_HEAD Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Submodule path 'htscodecs': checked out 'b9fc194f772e45bb0a1f44b08cbf8697a1384bae' Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Removing intermediate container 11a761f8ef19 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": ---> 973bfe353c95 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Step 4/6 : WORKDIR htslib Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": ---> Running in 8c4678b9f342 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Removing intermediate container 8c4678b9f342 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": ---> 2578d4ce65a4 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Step 5/6 : COPY build.sh $SRC/ Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": ---> 15d9035e1af6 Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Step 6/6 : COPY run_tests.sh $SRC/ Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": ---> 79d3a6eef1dd Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Successfully built 79d3a6eef1dd Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Successfully tagged gcr.io/oss-fuzz/htslib:latest Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065": Successfully tagged us-central1-docker.pkg.dev/oss-fuzz/unsafe/htslib:latest Finished Step #1 - "build-2a3a7f4a-2d35-43bc-b222-9c59c5c32065" Starting Step #2 - "srcmap" Step #2 - "srcmap": Already have image: gcr.io/oss-fuzz/htslib Step #2 - "srcmap": ++ tempfile Step #2 - "srcmap": + SRCMAP=/tmp/filelAb67N Step #2 - "srcmap": + echo '{}' Step #2 - "srcmap": + PATHS_TO_SCAN=/src Step #2 - "srcmap": + [[ c++ == \g\o ]] Step #2 - "srcmap": ++ find /src -name .git -type d Step #2 - "srcmap": + for DOT_GIT_DIR in $(find $PATHS_TO_SCAN -name ".git" -type d) Step #2 - "srcmap": ++ dirname /src/htslib/.git Step #2 - "srcmap": + GIT_DIR=/src/htslib Step #2 - "srcmap": + cd /src/htslib Step #2 - "srcmap": ++ git config --get remote.origin.url Step #2 - "srcmap": + GIT_URL=https://github.com/samtools/htslib.git Step #2 - "srcmap": ++ git rev-parse HEAD Step #2 - "srcmap": + GIT_REV=70dc8705e489f89eedf003a8d4101a5d1feaee6f Step #2 - "srcmap": + jq_inplace /tmp/filelAb67N '."/src/htslib" = { type: "git", url: "https://github.com/samtools/htslib.git", rev: "70dc8705e489f89eedf003a8d4101a5d1feaee6f" }' Step #2 - "srcmap": ++ tempfile Step #2 - "srcmap": + F=/tmp/fileks3S98 Step #2 - "srcmap": + cat /tmp/filelAb67N Step #2 - "srcmap": + jq '."/src/htslib" = { type: "git", url: "https://github.com/samtools/htslib.git", rev: "70dc8705e489f89eedf003a8d4101a5d1feaee6f" }' Step #2 - "srcmap": + mv /tmp/fileks3S98 /tmp/filelAb67N Step #2 - "srcmap": ++ find /src -name .svn -type d Step #2 - "srcmap": ++ find /src -name .hg -type d Step #2 - "srcmap": + '[' '' '!=' '' ']' Step #2 - "srcmap": + cat /tmp/filelAb67N Step #2 - "srcmap": + rm /tmp/filelAb67N Step #2 - "srcmap": { Step #2 - "srcmap": "/src/htslib": { Step #2 - "srcmap": "type": "git", Step #2 - "srcmap": "url": "https://github.com/samtools/htslib.git", Step #2 - "srcmap": "rev": "70dc8705e489f89eedf003a8d4101a5d1feaee6f" Step #2 - "srcmap": } Step #2 - "srcmap": } Finished Step #2 - "srcmap" Starting Step #3 - "compile-libfuzzer-coverage-x86_64" Step #3 - "compile-libfuzzer-coverage-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #3 - "compile-libfuzzer-coverage-x86_64": --------------------------------------------------------------- Step #3 - "compile-libfuzzer-coverage-x86_64": vm.mmap_rnd_bits = 28 Step #3 - "compile-libfuzzer-coverage-x86_64": Compiling libFuzzer to /usr/lib/libFuzzingEngine.a... done. Step #3 - "compile-libfuzzer-coverage-x86_64": --------------------------------------------------------------- Step #3 - "compile-libfuzzer-coverage-x86_64": CC=clang Step #3 - "compile-libfuzzer-coverage-x86_64": CXX=clang++ Step #3 - "compile-libfuzzer-coverage-x86_64": CFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument Step #3 - "compile-libfuzzer-coverage-x86_64": CXXFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -stdlib=libc++ Step #3 - "compile-libfuzzer-coverage-x86_64": RUSTFLAGS=--cfg fuzzing -Cdebuginfo=1 -Cforce-frame-pointers -Cinstrument-coverage -C link-arg=-lc++ Step #3 - "compile-libfuzzer-coverage-x86_64": --------------------------------------------------------------- Step #3 - "compile-libfuzzer-coverage-x86_64": + autoconf Step #3 - "compile-libfuzzer-coverage-x86_64": + autoheader Step #3 - "compile-libfuzzer-coverage-x86_64": + export 'LDFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument' Step #3 - "compile-libfuzzer-coverage-x86_64": + LDFLAGS='-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument' Step #3 - "compile-libfuzzer-coverage-x86_64": + ./configure 'LIBS=-lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread' Step #3 - "compile-libfuzzer-coverage-x86_64": checking for gcc... clang Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the C compiler works... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for C compiler default output file name... a.out Step #3 - "compile-libfuzzer-coverage-x86_64": checking for suffix of executables... Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether we are cross compiling... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking for suffix of object files... o Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether we are using the GNU C compiler... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether clang accepts -g... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for clang option to accept ISO C89... none needed Step #3 - "compile-libfuzzer-coverage-x86_64": checking for ranlib... ranlib Step #3 - "compile-libfuzzer-coverage-x86_64": checking for grep that handles long lines and -e... /usr/bin/grep Step #3 - "compile-libfuzzer-coverage-x86_64": checking for C compiler warning flags... -Wall Step #3 - "compile-libfuzzer-coverage-x86_64": checking how to run the C preprocessor... clang -E Step #3 - "compile-libfuzzer-coverage-x86_64": checking for egrep... /usr/bin/grep -E Step #3 - "compile-libfuzzer-coverage-x86_64": checking for ANSI C header files... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for sys/types.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for sys/stat.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for stdlib.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for string.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for memory.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for strings.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for inttypes.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for stdint.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for unistd.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether _XOPEN_SOURCE is declared... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether __get_cpuid_max is declared... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether __cpuid_count is declared... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking x86intrin.h usability... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking x86intrin.h presence... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for x86intrin.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking C compiler flags needed for sse4.1... -msse4.1 -mssse3 -mpopcnt Step #3 - "compile-libfuzzer-coverage-x86_64": checking C compiler flags needed for avx2... -mavx2 -mpopcnt Step #3 - "compile-libfuzzer-coverage-x86_64": checking C compiler flags needed for avx512f... -mavx512f -mpopcnt Step #3 - "compile-libfuzzer-coverage-x86_64": checking for working __builtin_clz... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for working __builtin_prefetch... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for working __builtin_cpu_supports("ssse3")... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for working __attribute__((target("ssse3")))... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for pkg-config... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking for special C compiler options needed for large files... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking for _FILE_OFFSET_BITS value needed for large files... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking shared library type for unknown-Linux... plain .so Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the linker supports versioned symbols... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -fvisibility=hidden... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for stdlib.h... (cached) yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for unistd.h... (cached) yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for sys/param.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for getpagesize... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for working mmap... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for gmtime_r... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for fsync... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for drand48... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for srand48_deterministic... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking for getauxval... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for elf_aux_info... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking for posix_memalign... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether fdatasync is declared... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for fdatasync... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for __attribute__((constructor))... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for clock_gettime with CLOCK_PROCESS_CPUTIME_ID... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for library containing log... none required Step #3 - "compile-libfuzzer-coverage-x86_64": checking for zlib.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for inflate in -lz... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for library containing recv... none required Step #3 - "compile-libfuzzer-coverage-x86_64": checking for bzlib.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for BZ2_bzBuffToBuffCompress in -lbz2... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for lzma.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for lzma_easy_buffer_encode in -llzma... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether htscodecs files are present... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for libdeflate.h... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking for libdeflate_deflate_compress in -ldeflate... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking for curl/curl.h... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for curl_easy_pause in -lcurl... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for CCHmac... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking for library containing HMAC... none required Step #3 - "compile-libfuzzer-coverage-x86_64": checking for fstatat... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for CMSG_LEN... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for epoll... yes (edge triggered) Step #3 - "compile-libfuzzer-coverage-x86_64": checking for sendfile... yes, Linux-style Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether EHOSTDOWN is declared... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether ENONET is declared... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether AI_V4MAPPED is declared... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether AI_ADDRCONFIG is declared... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wextra... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wformat... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wformat=2... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wconversion... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wtrampolines... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wstrict-aliasing... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -fstack-clash-protection... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -fstack-protector-strong... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -fcf-protection=full... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -mbranch-protection=standard... no Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -fno-delete-null-pointer-checks... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wl,-z,noexecstack... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wl,-z,relro... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wl,-z,now... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wl,--as-needed... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wl,--no-copy-dt-needed-entries... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking whether the compiler accepts -Wl,-z,nodlopen... yes Step #3 - "compile-libfuzzer-coverage-x86_64": checking for library containing regcomp... none required Step #3 - "compile-libfuzzer-coverage-x86_64": configure: creating ./config.status Step #3 - "compile-libfuzzer-coverage-x86_64": config.status: creating config.mk Step #3 - "compile-libfuzzer-coverage-x86_64": config.status: creating htslib.pc.tmp Step #3 - "compile-libfuzzer-coverage-x86_64": config.status: creating config.h Step #3 - "compile-libfuzzer-coverage-x86_64": config.status: linking htscodecs_bundled.mk to htscodecs.mk Step #3 - "compile-libfuzzer-coverage-x86_64": ++ nproc Step #3 - "compile-libfuzzer-coverage-x86_64": + make -j32 libhts.a bgzip htsfile tabix annot-tsv test/fuzz/hts_open_fuzzer.o Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o kfunc.o kfunc.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o kstring.o kstring.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o bcf_sr_sort.o bcf_sr_sort.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o bgzf.o bgzf.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o errmod.o errmod.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o faidx.o faidx.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o header.o header.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o hfile.o hfile.c Step #3 - "compile-libfuzzer-coverage-x86_64": printf '#define HTS_CC "%s"\n#define HTS_CPPFLAGS "%s"\n#define HTS_CFLAGS "%s"\n#define HTS_LDFLAGS "%s"\n#define HTS_LIBS "%s"\n' \ Step #3 - "compile-libfuzzer-coverage-x86_64": 'clang' \ Step #3 - "compile-libfuzzer-coverage-x86_64": '' \ Step #3 - "compile-libfuzzer-coverage-x86_64": '-Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden' \ Step #3 - "compile-libfuzzer-coverage-x86_64": '-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden ' \ Step #3 - "compile-libfuzzer-coverage-x86_64": '-llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl ' > config_vars.h Step #3 - "compile-libfuzzer-coverage-x86_64": echo '#define HTS_VERSION_TEXT "1.24-1-g70dc870"' > version.h Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o hts_expr.o hts_expr.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o hts_os.o hts_os.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o md5.o md5.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o multipart.o multipart.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o probaln.o probaln.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o realn.o realn.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o regidx.o regidx.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o region.o region.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o sam.o sam.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o sam_mods.o sam_mods.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o simd.o simd.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o synced_bcf_reader.o synced_bcf_reader.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o vcf_sweep.o vcf_sweep.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o tbx.o tbx.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o textutils.o textutils.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o thread_pool.o thread_pool.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o vcf.o vcf.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o vcfutils.o vcfutils.c Step #3 - "compile-libfuzzer-coverage-x86_64": Updating htscodecs/htscodecs/version.h : #define HTSCODECS_VERSION_TEXT "1.6.7-gb9fc194" Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/cram_codecs.o cram/cram_codecs.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/cram_decode.o cram/cram_decode.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/cram_encode.o cram/cram_encode.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/cram_external.o cram/cram_external.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/cram_index.o cram/cram_index.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/cram_io.o cram/cram_io.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/cram_stats.o cram/cram_stats.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/mFILE.o cram/mFILE.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/open_trace_file.o cram/open_trace_file.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/pooled_alloc.o cram/pooled_alloc.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o cram/string_alloc.o cram/string_alloc.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/arith_dynamic.c Step #3 - "compile-libfuzzer-coverage-x86_64": cram/cram_decode.c:2390:31: warning: unused variable 'q_id' [-Wunused-variable] Step #3 - "compile-libfuzzer-coverage-x86_64": 2390 | int qsize=0, nsize=0, q_id=0; Step #3 - "compile-libfuzzer-coverage-x86_64": |  ^~~~ Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/fqzcomp_qual.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/htscodecs.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/pack.o htscodecs/htscodecs/pack.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static4x16pr.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -mavx2 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx2.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -mavx512f -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_avx512.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -msse4.1 -mssse3 -mpopcnt -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_sse4.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr_neon.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static32x16pr.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rANS_static.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/rle.o htscodecs/htscodecs/rle.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/tokenise_name3.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htscodecs/htscodecs/utils.o htscodecs/htscodecs/utils.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o hfile_libcurl.o hfile_libcurl.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o hfile_gcs.o hfile_gcs.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o hfile_s3.o hfile_s3.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o bgzip.o bgzip.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o htsfile.o htsfile.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o tabix.o tabix.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o annot-tsv.o annot-tsv.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/fuzz/hts_open_fuzzer.o test/fuzz/hts_open_fuzzer.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o hts.o hts.c Step #3 - "compile-libfuzzer-coverage-x86_64": 1 warning generated. Step #3 - "compile-libfuzzer-coverage-x86_64": ar -rc libhts.a kfunc.o kstring.o bcf_sr_sort.o bgzf.o errmod.o faidx.o header.o hfile.o hts.o hts_expr.o hts_os.o md5.o multipart.o probaln.o realn.o regidx.o region.o sam.o sam_mods.o simd.o synced_bcf_reader.o vcf_sweep.o tbx.o textutils.o thread_pool.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_stats.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/string_alloc.o htscodecs/htscodecs/arith_dynamic.o htscodecs/htscodecs/fqzcomp_qual.o htscodecs/htscodecs/htscodecs.o htscodecs/htscodecs/pack.o htscodecs/htscodecs/rANS_static4x16pr.o htscodecs/htscodecs/rANS_static32x16pr_avx2.o htscodecs/htscodecs/rANS_static32x16pr_avx512.o htscodecs/htscodecs/rANS_static32x16pr_sse4.o htscodecs/htscodecs/rANS_static32x16pr_neon.o htscodecs/htscodecs/rANS_static32x16pr.o htscodecs/htscodecs/rANS_static.o htscodecs/htscodecs/rle.o htscodecs/htscodecs/tokenise_name3.o htscodecs/htscodecs/utils.o hfile_libcurl.o hfile_gcs.o hfile_s3.o Step #3 - "compile-libfuzzer-coverage-x86_64": ranlib libhts.a Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o bgzip bgzip.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o htsfile htsfile.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o tabix tabix.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o annot-tsv annot-tsv.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": ++ nproc Step #3 - "compile-libfuzzer-coverage-x86_64": + make -j32 test/hts_endian test/fieldarith test/hfile test/pileup test/pileup_mod test/sam test/test_bgzf test/test_expr test/test_faidx test/test_kfunc test/test_khash test/test_kstring test/test_mod test/test_nibbles test/test_realn test/test-regidx test/test_str2int test/test_time_funcs test/test_view test/test_index test/test-vcf-api test/test-vcf-sweep test/test-bcf-sr test/test-bcf-translate test/test-parse-reg test/test_introspection test/test-bcf_set_variant_type Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/hts_endian.o test/hts_endian.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/fieldarith.o test/fieldarith.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/hfile.o test/hfile.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/pileup.o test/pileup.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/pileup_mod.o test/pileup_mod.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/sam.o test/sam.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_bgzf.o test/test_bgzf.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_expr.o test/test_expr.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_faidx.o test/test_faidx.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_kfunc.o test/test_kfunc.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_khash.o test/test_khash.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_kstring.o test/test_kstring.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_mod.o test/test_mod.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_nibbles.o test/test_nibbles.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_realn.o test/test_realn.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test-regidx.o test/test-regidx.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_str2int.o test/test_str2int.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_time_funcs.o test/test_time_funcs.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_view.o test/test_view.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_index.o test/test_index.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test-vcf-api.o test/test-vcf-api.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test-vcf-sweep.o test/test-vcf-sweep.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test-bcf-sr.o test/test-bcf-sr.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test-bcf-translate.o test/test-bcf-translate.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test-parse-reg.o test/test-parse-reg.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test_introspection.o test/test_introspection.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -Wall -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -I. -c -o test/test-bcf_set_variant_type.o test/test-bcf_set_variant_type.c Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/fieldarith test/fieldarith.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_kfunc test/test_kfunc.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_introspection test/test_introspection.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test-bcf-translate test/test-bcf-translate.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test-vcf-sweep test/test-vcf-sweep.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_index test/test_index.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test-parse-reg test/test-parse-reg.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_realn test/test_realn.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_nibbles test/test_nibbles.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_mod test/test_mod.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/pileup test/pileup.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_time_funcs test/test_time_funcs.o Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/pileup_mod test/pileup_mod.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_str2int test/test_str2int.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test-bcf-sr test/test-bcf-sr.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/hfile test/hfile.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_faidx test/test_faidx.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/hts_endian test/hts_endian.o -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_view test/test_view.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test-regidx test/test-regidx.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_expr test/test_expr.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_khash test/test_khash.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_bgzf test/test_bgzf.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test-vcf-api test/test-vcf-api.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test_kstring test/test_kstring.o -lm Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/sam test/sam.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": clang -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -fvisibility=hidden -o test/test-bcf_set_variant_type test/test-bcf_set_variant_type.o libhts.a -llzma -lbz2 -lz -lz -lm -lbz2 -llzma -lcurl -lcrypto -lpthread -lcurl -lpthread Step #3 - "compile-libfuzzer-coverage-x86_64": + clang++ -O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=unknown-warning-option -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -fprofile-instr-generate -fcoverage-mapping -pthread -Wl,--no-as-needed -Wl,-ldl -Wl,-lm -Wno-unused-command-line-argument -stdlib=libc++ -o /workspace/out/libfuzzer-coverage-x86_64/hts_open_fuzzer test/fuzz/hts_open_fuzzer.o -fsanitize=fuzzer libhts.a -lz -lbz2 -llzma -lcurl -lcrypto -lpthread Finished Step #3 - "compile-libfuzzer-coverage-x86_64" Starting Step #4 Step #4: Pulling image: gcr.io/oss-fuzz-base/base-runner Step #4: Using default tag: latest Step #4: latest: Pulling from oss-fuzz-base/base-runner Step #4: b549f31133a9: Already exists Step #4: 6e628c8ef21f: Already exists Step #4: f53ab3868c1c: Already exists Step #4: cac03dd67be9: Pulling fs layer Step #4: 6ad67417113a: Pulling fs layer Step #4: 0f23db3019f6: Pulling fs layer Step #4: f7f923ac7112: Pulling fs layer Step #4: 5ac5fd5c9155: Pulling fs layer Step #4: e55f3aeb0db5: Pulling fs layer Step #4: 99a80ef90662: Pulling fs layer Step #4: ed071ff265fb: Pulling fs layer Step 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91359fd5dc87: Pull complete Step #4: Digest: sha256:51304a6c0524956a6dc45df99478e1ab1d1869e27c21c95a56ab34f709472326 Step #4: Status: Downloaded newer image for gcr.io/oss-fuzz-base/base-runner:latest Step #4: gcr.io/oss-fuzz-base/base-runner:latest Finished Step #4 Starting Step #5 Step #5: Already have image (with digest): gcr.io/oss-fuzz-base/base-runner Step #5: [/corpus/hts_open_fuzzer.zip] Step #5: End-of-central-directory signature not found. Either this file is not Step #5: a zipfile, or it constitutes one disk of a multi-part archive. In the Step #5: latter case the central directory and zipfile comment will be found on Step #5: the last disk(s) of this archive. Step #5: unzip: cannot find zipfile directory in one of /corpus/hts_open_fuzzer.zip or Step #5: /corpus/hts_open_fuzzer.zip.zip, and cannot find /corpus/hts_open_fuzzer.zip.ZIP, period. Step #5: Failed to unpack the corpus for hts_open_fuzzer. This usually means that corpus backup for a particular fuzz target does not exist. If a fuzz target was added in the last 24 hours, please wait one more day. Otherwise, something is wrong with the fuzz target or the infrastructure, and corpus pruning task does not finish successfully. Step #5: ******************************************************************************** Step #5: Code coverage report generation failed. Step #5: To reproduce, run: Step #5: python infra/helper.py build_image htslib Step #5: python infra/helper.py build_fuzzers --sanitizer coverage htslib Step #5: python infra/helper.py coverage htslib Step #5: ******************************************************************************** Finished Step #5 ERROR ERROR: build step 5 "gcr.io/oss-fuzz-base/base-runner" failed: step exited with non-zero status: 1