starting build "f5003713-18a7-4b50-b2e7-025e29b5fa49" FETCHSOURCE BUILD Starting Step #0 Step #0: Pulling image: gcr.io/oss-fuzz-base/base-runner Step #0: Using default tag: latest Step #0: latest: Pulling from oss-fuzz-base/base-runner Step #0: b549f31133a9: Pulling fs layer Step #0: 5fc1849ea29a: Pulling fs layer Step #0: 5bca3ba2fc7d: Pulling fs layer Step #0: fae44f6c4afb: Pulling fs layer Step #0: 6bb086a76dac: Pulling fs layer Step #0: 93d27c16d33e: Pulling fs layer Step #0: 2ed907c114e3: Pulling fs layer Step #0: c356b7427c88: Pulling fs layer Step #0: e8d856c3fdca: Pulling fs layer Step #0: 3931eca29f39: Pulling fs layer Step #0: b76e3f62a0ba: Pulling fs layer Step #0: 7bfd5336ece5: Pulling fs layer Step #0: e0b08c0fdc11: Pulling fs layer Step #0: 2846796a4416: Pulling fs layer Step #0: 6cc7e05a106e: Pulling fs layer Step #0: 6c44541c6a30: Pulling fs layer Step #0: 110ea339d19c: Pulling fs layer Step #0: fae44f6c4afb: Waiting Step #0: 080996c25b34: Pulling fs layer Step #0: 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sha256:dc299f69dfed0a7c14bd3c39c65c153824e6f98156f34438d47c59f39aa939bf Step #0: Status: Downloaded newer image for gcr.io/oss-fuzz-base/base-runner:latest Step #0: gcr.io/oss-fuzz-base/base-runner:latest Finished Step #0 Starting Step #1 Step #1: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #1: Copying gs://oss-fuzz-coverage/openbabel/textcov_reports/20250117/fuzz_convert.covreport... Step #1: / [0/3 files][ 0.0 B/ 3.1 MiB] 0% Done / [1/3 files][ 1.8 MiB/ 3.1 MiB] 58% Done Copying gs://oss-fuzz-coverage/openbabel/textcov_reports/20250117/fuzz_obconversion_sdf.covreport... Step #1: / [1/3 files][ 1.8 MiB/ 3.1 MiB] 58% Done Copying gs://oss-fuzz-coverage/openbabel/textcov_reports/20250117/fuzz_obconversion_smiles.covreport... Step #1: / [1/3 files][ 1.8 MiB/ 3.1 MiB] 58% Done / [2/3 files][ 2.7 MiB/ 3.1 MiB] 85% Done / [3/3 files][ 3.1 MiB/ 3.1 MiB] 100% Done Step #1: Operation completed over 3 objects/3.1 MiB. Finished Step #1 Starting Step #2 Step #2: Already have image (with digest): gcr.io/oss-fuzz-base/base-runner Step #2: total 3224 Step #2: -rw-r--r-- 1 root root 1919196 Jan 17 10:06 fuzz_convert.covreport Step #2: -rw-r--r-- 1 root root 905902 Jan 17 10:06 fuzz_obconversion_sdf.covreport Step #2: -rw-r--r-- 1 root root 467187 Jan 17 10:06 fuzz_obconversion_smiles.covreport Finished Step #2 Starting Step #3 Step #3: Already have image (with digest): gcr.io/cloud-builders/git Step #3: Cloning into 'oss-fuzz'... Finished Step #3 Starting Step #4 Step #4: Already have image (with digest): gcr.io/cloud-builders/docker Step #4: Sending build context to Docker daemon 5.12kB Step #4: Step 1/5 : FROM gcr.io/oss-fuzz-base/base-builder Step #4: latest: Pulling from oss-fuzz-base/base-builder Step #4: b549f31133a9: Already exists Step #4: 5fc1849ea29a: Already exists Step #4: 5bca3ba2fc7d: Already exists Step #4: c3f8f264f82b: Pulling fs layer Step #4: 4beb7a10c8f4: Pulling fs layer Step #4: 0ca13ee436c2: Pulling fs layer Step #4: d11b53fc85fe: Pulling fs layer Step #4: 1cbdd3829a23: Pulling fs layer Step #4: 7f7781280c06: Pulling fs layer Step #4: 846994f6541d: Pulling fs layer Step #4: 83087fdbd323: Pulling fs layer Step #4: 5e20af423505: Pulling fs layer Step #4: 7e2d2d2efe99: Pulling fs layer Step #4: bae98e0cfe62: Pulling fs layer Step #4: 7c94181fc29a: Pulling fs layer Step #4: 4018e9ce42a6: Pulling fs layer Step #4: bf9219ec845b: Pulling fs layer Step #4: 71174894d930: Pulling fs layer Step #4: 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Digest: sha256:a2f870afb8e148c5cfc32450b790335c008e4a0c77e210bbb8adf0c60caae5c6 Step #4: Status: Downloaded newer image for gcr.io/oss-fuzz-base/base-builder:latest Step #4: ---> dd198c39e8a6 Step #4: Step 2/5 : RUN apt-get update && apt install -y cmake Step #4: ---> Running in bdc8f9c5776f Step #4: Get:1 http://security.ubuntu.com/ubuntu focal-security InRelease [128 kB] Step #4: Hit:2 http://archive.ubuntu.com/ubuntu focal InRelease Step #4: Get:3 http://archive.ubuntu.com/ubuntu focal-updates InRelease [128 kB] Step #4: Get:4 http://archive.ubuntu.com/ubuntu focal-backports InRelease [128 kB] Step #4: Fetched 383 kB in 1s (351 kB/s) Step #4: Reading package lists... Step #4:  Step #4: WARNING: apt does not have a stable CLI interface. Use with caution in scripts. Step #4: Step #4: Reading package lists... Step #4: Building dependency tree... Step #4: Reading state information... Step #4: The following additional packages will be installed: Step #4: cmake-data libarchive13 libicu66 libjsoncpp1 librhash0 libuv1 libxml2 Step #4: Suggested packages: Step #4: cmake-doc ninja-build lrzip Step #4: The following NEW packages will be installed: Step #4: cmake cmake-data libarchive13 libicu66 libjsoncpp1 librhash0 libuv1 libxml2 Step #4: 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. Step #4: Need to get 15.0 MB of archives. Step #4: After this operation, 65.0 MB of additional disk space will be used. Step #4: Get:1 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libicu66 amd64 66.1-2ubuntu2.1 [8515 kB] Step #4: Get:2 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libxml2 amd64 2.9.10+dfsg-5ubuntu0.20.04.7 [640 kB] Step #4: Get:3 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libuv1 amd64 1.34.2-1ubuntu1.5 [80.9 kB] Step #4: Get:4 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 cmake-data all 3.16.3-1ubuntu1.20.04.1 [1613 kB] Step #4: Get:5 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libarchive13 amd64 3.4.0-2ubuntu1.4 [327 kB] Step #4: Get:6 http://archive.ubuntu.com/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] Step #4: Get:7 http://archive.ubuntu.com/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] Step #4: Get:8 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 cmake amd64 3.16.3-1ubuntu1.20.04.1 [3668 kB] Step #4: debconf: delaying package configuration, since apt-utils is not installed Step #4: Fetched 15.0 MB in 2s (9306 kB/s) Step #4: Selecting previously unselected package libicu66:amd64. Step #4: (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17393 files and directories currently installed.) Step #4: Preparing to unpack .../0-libicu66_66.1-2ubuntu2.1_amd64.deb ... Step #4: Unpacking libicu66:amd64 (66.1-2ubuntu2.1) ... Step #4: Selecting previously unselected package libxml2:amd64. Step #4: Preparing to unpack .../1-libxml2_2.9.10+dfsg-5ubuntu0.20.04.7_amd64.deb ... Step #4: Unpacking libxml2:amd64 (2.9.10+dfsg-5ubuntu0.20.04.7) ... Step #4: Selecting previously unselected package libuv1:amd64. Step #4: Preparing to unpack .../2-libuv1_1.34.2-1ubuntu1.5_amd64.deb ... Step #4: Unpacking libuv1:amd64 (1.34.2-1ubuntu1.5) ... Step #4: Selecting previously unselected package cmake-data. Step #4: Preparing to unpack .../3-cmake-data_3.16.3-1ubuntu1.20.04.1_all.deb ... Step #4: Unpacking cmake-data (3.16.3-1ubuntu1.20.04.1) ... Step #4: Selecting previously unselected package libarchive13:amd64. Step #4: Preparing to unpack .../4-libarchive13_3.4.0-2ubuntu1.4_amd64.deb ... Step #4: Unpacking libarchive13:amd64 (3.4.0-2ubuntu1.4) ... Step #4: Selecting previously unselected package libjsoncpp1:amd64. Step #4: Preparing to unpack .../5-libjsoncpp1_1.7.4-3.1ubuntu2_amd64.deb ... Step #4: Unpacking libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... Step #4: Selecting previously unselected package librhash0:amd64. Step #4: Preparing to unpack .../6-librhash0_1.3.9-1_amd64.deb ... Step #4: Unpacking librhash0:amd64 (1.3.9-1) ... Step #4: Selecting previously unselected package cmake. Step #4: Preparing to unpack .../7-cmake_3.16.3-1ubuntu1.20.04.1_amd64.deb ... Step #4: Unpacking cmake (3.16.3-1ubuntu1.20.04.1) ... Step #4: Setting up libicu66:amd64 (66.1-2ubuntu2.1) ... Step #4: Setting up libuv1:amd64 (1.34.2-1ubuntu1.5) ... Step #4: Setting up librhash0:amd64 (1.3.9-1) ... Step #4: Setting up cmake-data (3.16.3-1ubuntu1.20.04.1) ... Step #4: Setting up libxml2:amd64 (2.9.10+dfsg-5ubuntu0.20.04.7) ... Step #4: Setting up libjsoncpp1:amd64 (1.7.4-3.1ubuntu2) ... Step #4: Setting up libarchive13:amd64 (3.4.0-2ubuntu1.4) ... Step #4: Setting up cmake (3.16.3-1ubuntu1.20.04.1) ... Step #4: Processing triggers for libc-bin (2.31-0ubuntu9.16) ... Step #4: Removing intermediate container bdc8f9c5776f Step #4: ---> 098982074c82 Step #4: Step 3/5 : RUN git clone --depth 1 https://github.com/openbabel/openbabel.git Step #4: ---> Running in 326ab0a8d347 Step #4: Cloning into 'openbabel'... 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Step #4: Removing intermediate container 326ab0a8d347 Step #4: ---> cf5ce9b16a7e Step #4: Step 4/5 : COPY build.sh $SRC Step #4: ---> fc37e3e8a0be Step #4: Step 5/5 : WORKDIR $SRC/openbabel Step #4: ---> Running in 5d21580958fc Step #4: Removing intermediate container 5d21580958fc Step #4: ---> dc4447983c9c Step #4: Successfully built dc4447983c9c Step #4: Successfully tagged gcr.io/oss-fuzz/openbabel:latest Finished Step #4 Starting Step #5 - "srcmap" Step #5 - "srcmap": Already have image: gcr.io/oss-fuzz/openbabel Step #5 - "srcmap": ++ tempfile Step #5 - "srcmap": + SRCMAP=/tmp/fileoHn0FN Step #5 - "srcmap": + echo '{}' Step #5 - "srcmap": + PATHS_TO_SCAN=/src Step #5 - "srcmap": + [[ c++ == \g\o ]] Step #5 - "srcmap": ++ find /src -name .git -type d Step #5 - "srcmap": + for DOT_GIT_DIR in $(find $PATHS_TO_SCAN -name ".git" -type d) Step #5 - "srcmap": ++ dirname /src/openbabel/.git Step #5 - "srcmap": + GIT_DIR=/src/openbabel Step #5 - "srcmap": + cd /src/openbabel Step #5 - "srcmap": ++ git config --get remote.origin.url Step #5 - "srcmap": + GIT_URL=https://github.com/openbabel/openbabel.git Step #5 - "srcmap": ++ git rev-parse HEAD Step #5 - "srcmap": + GIT_REV=889c350feb179b43aa43985799910149d4eaa2bc Step #5 - "srcmap": + jq_inplace /tmp/fileoHn0FN '."/src/openbabel" = { type: "git", url: "https://github.com/openbabel/openbabel.git", rev: "889c350feb179b43aa43985799910149d4eaa2bc" }' Step #5 - "srcmap": ++ tempfile Step #5 - "srcmap": + F=/tmp/fileQlKUOb Step #5 - "srcmap": + cat /tmp/fileoHn0FN Step #5 - "srcmap": + jq '."/src/openbabel" = { type: "git", url: "https://github.com/openbabel/openbabel.git", rev: "889c350feb179b43aa43985799910149d4eaa2bc" }' Step #5 - "srcmap": + mv /tmp/fileQlKUOb /tmp/fileoHn0FN Step #5 - "srcmap": ++ find /src -name .svn -type d Step #5 - "srcmap": ++ find /src -name .hg -type d Step #5 - "srcmap": + '[' '' '!=' '' ']' Step #5 - "srcmap": + cat /tmp/fileoHn0FN Step #5 - "srcmap": + rm /tmp/fileoHn0FN Step #5 - "srcmap": { Step #5 - "srcmap": "/src/openbabel": { Step #5 - "srcmap": "type": "git", Step #5 - "srcmap": "url": "https://github.com/openbabel/openbabel.git", Step #5 - "srcmap": "rev": "889c350feb179b43aa43985799910149d4eaa2bc" Step #5 - "srcmap": } Step #5 - "srcmap": } Finished Step #5 - "srcmap" Starting Step #6 - "compile-libfuzzer-introspector-x86_64" Step #6 - "compile-libfuzzer-introspector-x86_64": Already have image (with digest): gcr.io/cloud-builders/docker Step #6 - "compile-libfuzzer-introspector-x86_64": --------------------------------------------------------------- Step #6 - "compile-libfuzzer-introspector-x86_64": vm.mmap_rnd_bits = 28 Step #6 - "compile-libfuzzer-introspector-x86_64": Compiling libFuzzer to /usr/lib/libFuzzingEngine.a... done. 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Done Step #6 - "compile-libfuzzer-introspector-x86_64": Building dependency tree... 0% Building dependency tree... 0% Building dependency tree... 50% Building dependency tree... 50% Building dependency tree Step #6 - "compile-libfuzzer-introspector-x86_64": Reading state information... 0% Reading state information... 0% Reading state information... Done Step #6 - "compile-libfuzzer-introspector-x86_64": The following additional packages will be installed: Step #6 - "compile-libfuzzer-introspector-x86_64": libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libyaml-0-2 Step #6 - "compile-libfuzzer-introspector-x86_64": Suggested packages: Step #6 - "compile-libfuzzer-introspector-x86_64": libyaml-doc Step #6 - "compile-libfuzzer-introspector-x86_64": The following NEW packages will be installed: Step #6 - "compile-libfuzzer-introspector-x86_64": libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev Step #6 - "compile-libfuzzer-introspector-x86_64": libyaml-0-2 libyaml-dev zlib1g-dev Step #6 - "compile-libfuzzer-introspector-x86_64": 0 upgraded, 8 newly installed, 0 to remove and 0 not upgraded. Step #6 - "compile-libfuzzer-introspector-x86_64": Need to get 624 kB of archives. Step #6 - "compile-libfuzzer-introspector-x86_64": After this operation, 2657 kB of additional disk space will be used. Step #6 - "compile-libfuzzer-introspector-x86_64": 0% [Working] Get:1 http://archive.ubuntu.com/ubuntu focal/main amd64 libyaml-0-2 amd64 0.2.2-1 [48.9 kB] Step #6 - "compile-libfuzzer-introspector-x86_64": 2% [1 libyaml-0-2 14.2 kB/48.9 kB 29%] 9% [Working] Get:2 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libjpeg-turbo8 amd64 2.0.3-0ubuntu1.20.04.3 [118 kB] Step #6 - "compile-libfuzzer-introspector-x86_64": 9% [2 libjpeg-turbo8 2604 B/118 kB 2%] 26% [Waiting for headers] Get:3 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libjpeg-turbo8-dev amd64 2.0.3-0ubuntu1.20.04.3 [238 kB] Step #6 - "compile-libfuzzer-introspector-x86_64": 26% [3 libjpeg-turbo8-dev 104 B/238 kB 0%] 59% [Waiting for headers] Get:4 http://archive.ubuntu.com/ubuntu focal/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] Step #6 - "compile-libfuzzer-introspector-x86_64": 60% [4 libjpeg8 1872 B/2194 B 85%] 62% [Waiting for headers] Get:5 http://archive.ubuntu.com/ubuntu focal/main amd64 libjpeg8-dev amd64 8c-2ubuntu8 [1552 B] Step #6 - "compile-libfuzzer-introspector-x86_64": 65% [Waiting for headers] Get:6 http://archive.ubuntu.com/ubuntu focal/main amd64 libjpeg-dev amd64 8c-2ubuntu8 [1546 B] Step #6 - "compile-libfuzzer-introspector-x86_64": 65% [6 libjpeg-dev 446 B/1546 B 29%] 68% [Waiting for headers] Get:7 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2ubuntu1.5 [155 kB] Step #6 - "compile-libfuzzer-introspector-x86_64": 68% [7 zlib1g-dev 1504 B/155 kB 1%] 90% [Waiting for headers] Get:8 http://archive.ubuntu.com/ubuntu focal/main amd64 libyaml-dev amd64 0.2.2-1 [58.2 kB] Step #6 - "compile-libfuzzer-introspector-x86_64": 90% [8 libyaml-dev 1798 B/58.2 kB 3%] 100% [Working] Fetched 624 kB in 1s (657 kB/s) Step #6 - "compile-libfuzzer-introspector-x86_64": debconf: delaying package configuration, since apt-utils is not installed Step #6 - "compile-libfuzzer-introspector-x86_64": Selecting previously unselected package libyaml-0-2:amd64. Step #6 - "compile-libfuzzer-introspector-x86_64": (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20227 files and directories currently installed.) Step #6 - "compile-libfuzzer-introspector-x86_64": Preparing to unpack .../0-libyaml-0-2_0.2.2-1_amd64.deb ... Step #6 - "compile-libfuzzer-introspector-x86_64": Unpacking libyaml-0-2:amd64 (0.2.2-1) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Selecting previously unselected package libjpeg-turbo8:amd64. Step #6 - "compile-libfuzzer-introspector-x86_64": Preparing to unpack .../1-libjpeg-turbo8_2.0.3-0ubuntu1.20.04.3_amd64.deb ... Step #6 - "compile-libfuzzer-introspector-x86_64": Unpacking libjpeg-turbo8:amd64 (2.0.3-0ubuntu1.20.04.3) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Selecting previously unselected package libjpeg-turbo8-dev:amd64. Step #6 - "compile-libfuzzer-introspector-x86_64": Preparing to unpack .../2-libjpeg-turbo8-dev_2.0.3-0ubuntu1.20.04.3_amd64.deb ... Step #6 - "compile-libfuzzer-introspector-x86_64": Unpacking libjpeg-turbo8-dev:amd64 (2.0.3-0ubuntu1.20.04.3) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Selecting previously unselected package libjpeg8:amd64. Step #6 - "compile-libfuzzer-introspector-x86_64": Preparing to unpack .../3-libjpeg8_8c-2ubuntu8_amd64.deb ... Step #6 - "compile-libfuzzer-introspector-x86_64": Unpacking libjpeg8:amd64 (8c-2ubuntu8) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Selecting previously unselected package libjpeg8-dev:amd64. Step #6 - "compile-libfuzzer-introspector-x86_64": Preparing to unpack .../4-libjpeg8-dev_8c-2ubuntu8_amd64.deb ... Step #6 - "compile-libfuzzer-introspector-x86_64": Unpacking libjpeg8-dev:amd64 (8c-2ubuntu8) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Selecting previously unselected package libjpeg-dev:amd64. Step #6 - "compile-libfuzzer-introspector-x86_64": Preparing to unpack .../5-libjpeg-dev_8c-2ubuntu8_amd64.deb ... Step #6 - "compile-libfuzzer-introspector-x86_64": Unpacking libjpeg-dev:amd64 (8c-2ubuntu8) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Selecting previously unselected package zlib1g-dev:amd64. Step #6 - "compile-libfuzzer-introspector-x86_64": Preparing to unpack .../6-zlib1g-dev_1%3a1.2.11.dfsg-2ubuntu1.5_amd64.deb ... Step #6 - "compile-libfuzzer-introspector-x86_64": Unpacking zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu1.5) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Selecting previously unselected package libyaml-dev:amd64. Step #6 - "compile-libfuzzer-introspector-x86_64": Preparing to unpack .../7-libyaml-dev_0.2.2-1_amd64.deb ... Step #6 - "compile-libfuzzer-introspector-x86_64": Unpacking libyaml-dev:amd64 (0.2.2-1) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Setting up libyaml-0-2:amd64 (0.2.2-1) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Setting up libjpeg-turbo8:amd64 (2.0.3-0ubuntu1.20.04.3) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu1.5) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Setting up libjpeg8:amd64 (8c-2ubuntu8) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Setting up libjpeg-turbo8-dev:amd64 (2.0.3-0ubuntu1.20.04.3) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Setting up libyaml-dev:amd64 (0.2.2-1) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Setting up libjpeg8-dev:amd64 (8c-2ubuntu8) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Setting up libjpeg-dev:amd64 (8c-2ubuntu8) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Processing triggers for libc-bin (2.31-0ubuntu9.16) ... Step #6 - "compile-libfuzzer-introspector-x86_64": Requirement already satisfied: pip in /usr/local/lib/python3.10/site-packages (24.3.1) Step #6 - "compile-libfuzzer-introspector-x86_64": Requirement already satisfied: setuptools in /usr/local/lib/python3.10/site-packages (65.5.0) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting setuptools Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading setuptools-75.8.0-py3-none-any.whl.metadata (6.7 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading setuptools-75.8.0-py3-none-any.whl (1.2 MB) Step #6 - "compile-libfuzzer-introspector-x86_64": [?25l ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0/1.2 MB ? eta -:--:--  ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.2/1.2 MB 24.0 MB/s eta 0:00:00 Step #6 - "compile-libfuzzer-introspector-x86_64": [?25hInstalling collected packages: setuptools Step #6 - "compile-libfuzzer-introspector-x86_64": Attempting uninstall: setuptools Step #6 - "compile-libfuzzer-introspector-x86_64": Found existing installation: setuptools 65.5.0 Step #6 - "compile-libfuzzer-introspector-x86_64": Uninstalling setuptools-65.5.0: Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully uninstalled setuptools-65.5.0 Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully installed setuptools-75.8.0 Step #6 - "compile-libfuzzer-introspector-x86_64": WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager, possibly rendering your system unusable.It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv. Use the --root-user-action option if you know what you are doing and want to suppress this warning. Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting cxxfilt Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading cxxfilt-0.3.0-py2.py3-none-any.whl.metadata (3.5 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting pyyaml Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading PyYAML-6.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting beautifulsoup4 Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading beautifulsoup4-4.12.3-py3-none-any.whl.metadata (3.8 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting lxml Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading lxml-5.3.0-cp310-cp310-manylinux_2_28_x86_64.whl.metadata (3.8 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting soupsieve Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading soupsieve-2.6-py3-none-any.whl.metadata (4.6 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting rust-demangler Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading rust_demangler-1.0-py3-none-any.whl.metadata (866 bytes) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading cxxfilt-0.3.0-py2.py3-none-any.whl (4.6 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading PyYAML-6.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (751 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": [?25l ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0/751.2 kB ? eta -:--:--  ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 751.2/751.2 kB 20.2 MB/s eta 0:00:00 Step #6 - "compile-libfuzzer-introspector-x86_64": [?25hDownloading beautifulsoup4-4.12.3-py3-none-any.whl (147 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading lxml-5.3.0-cp310-cp310-manylinux_2_28_x86_64.whl (5.0 MB) Step #6 - "compile-libfuzzer-introspector-x86_64": [?25l ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0/5.0 MB ? eta -:--:--  ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 5.0/5.0 MB 90.2 MB/s eta 0:00:00 Step #6 - "compile-libfuzzer-introspector-x86_64": [?25hDownloading soupsieve-2.6-py3-none-any.whl (36 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading rust_demangler-1.0-py3-none-any.whl (8.3 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Installing collected packages: rust-demangler, cxxfilt, soupsieve, pyyaml, lxml, beautifulsoup4 Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully installed beautifulsoup4-4.12.3 cxxfilt-0.3.0 lxml-5.3.0 pyyaml-6.0.2 rust-demangler-1.0 soupsieve-2.6 Step #6 - "compile-libfuzzer-introspector-x86_64": WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager, possibly rendering your system unusable.It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv. Use the --root-user-action option if you know what you are doing and want to suppress this warning. Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting matplotlib Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading matplotlib-3.10.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (11 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting contourpy>=1.0.1 (from matplotlib) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading contourpy-1.3.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (5.4 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting cycler>=0.10 (from matplotlib) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading cycler-0.12.1-py3-none-any.whl.metadata (3.8 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting fonttools>=4.22.0 (from matplotlib) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading fonttools-4.55.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (165 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting kiwisolver>=1.3.1 (from matplotlib) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading kiwisolver-1.4.8-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl.metadata (6.2 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting numpy>=1.23 (from matplotlib) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading numpy-2.2.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (62 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting packaging>=20.0 (from matplotlib) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading packaging-24.2-py3-none-any.whl.metadata (3.2 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting pillow>=8 (from matplotlib) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading pillow-11.1.0-cp310-cp310-manylinux_2_28_x86_64.whl.metadata (9.1 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting pyparsing>=2.3.1 (from matplotlib) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading pyparsing-3.2.1-py3-none-any.whl.metadata (5.0 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting python-dateutil>=2.7 (from matplotlib) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Requirement already satisfied: six>=1.5 in /usr/local/lib/python3.10/site-packages (from python-dateutil>=2.7->matplotlib) (1.15.0) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading matplotlib-3.10.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (8.6 MB) Step #6 - "compile-libfuzzer-introspector-x86_64": [?25l ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0/8.6 MB ? eta -:--:--  ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 8.6/8.6 MB 105.3 MB/s eta 0:00:00 Step #6 - "compile-libfuzzer-introspector-x86_64": [?25hDownloading contourpy-1.3.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (324 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading cycler-0.12.1-py3-none-any.whl (8.3 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading fonttools-4.55.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.6 MB) Step #6 - "compile-libfuzzer-introspector-x86_64": [?25l ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0/4.6 MB ? eta -:--:--  ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.6/4.6 MB 131.7 MB/s eta 0:00:00 Step #6 - "compile-libfuzzer-introspector-x86_64": [?25hDownloading kiwisolver-1.4.8-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (1.6 MB) Step #6 - "compile-libfuzzer-introspector-x86_64": [?25l ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0/1.6 MB ? eta -:--:--  ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.6/1.6 MB 87.6 MB/s eta 0:00:00 Step #6 - "compile-libfuzzer-introspector-x86_64": [?25hDownloading numpy-2.2.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (16.4 MB) Step #6 - "compile-libfuzzer-introspector-x86_64": [?25l ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0/16.4 MB ? eta -:--:--  ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 16.4/16.4 MB 156.5 MB/s eta 0:00:00 Step #6 - "compile-libfuzzer-introspector-x86_64": [?25hDownloading packaging-24.2-py3-none-any.whl (65 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading pillow-11.1.0-cp310-cp310-manylinux_2_28_x86_64.whl (4.5 MB) Step #6 - "compile-libfuzzer-introspector-x86_64": [?25l ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 0.0/4.5 MB ? eta -:--:--  ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.5/4.5 MB 129.8 MB/s eta 0:00:00 Step #6 - "compile-libfuzzer-introspector-x86_64": [?25hDownloading pyparsing-3.2.1-py3-none-any.whl (107 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Installing collected packages: python-dateutil, pyparsing, pillow, packaging, numpy, kiwisolver, fonttools, cycler, contourpy, matplotlib Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully installed contourpy-1.3.1 cycler-0.12.1 fonttools-4.55.3 kiwisolver-1.4.8 matplotlib-3.10.0 numpy-2.2.1 packaging-24.2 pillow-11.1.0 pyparsing-3.2.1 python-dateutil-2.9.0.post0 Step #6 - "compile-libfuzzer-introspector-x86_64": WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager, possibly rendering your system unusable.It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv. Use the --root-user-action option if you know what you are doing and want to suppress this warning. Step #6 - "compile-libfuzzer-introspector-x86_64": /fuzz-introspector/src /src/openbabel Step #6 - "compile-libfuzzer-introspector-x86_64": Processing /fuzz-introspector/src Step #6 - "compile-libfuzzer-introspector-x86_64": Installing build dependencies ... [?25l- \ | / done Step #6 - "compile-libfuzzer-introspector-x86_64": [?25h Getting requirements to build wheel ... [?25l- done Step #6 - "compile-libfuzzer-introspector-x86_64": [?25h Preparing metadata (pyproject.toml) ... [?25l- done Step #6 - "compile-libfuzzer-introspector-x86_64": [?25hCollecting beautifulsoup4==4.10.0 (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading beautifulsoup4-4.10.0-py3-none-any.whl.metadata (3.5 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Requirement already satisfied: cxxfilt==0.3.0 in /usr/local/lib/python3.10/site-packages (from fuzz-introspector==0.1.3) (0.3.0) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting lxml==4.9.1 (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading lxml-4.9.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (3.3 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting matplotlib==3.7.5 (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading matplotlib-3.7.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (5.7 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting PyYAML==6.0 (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading PyYAML-6.0-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_12_x86_64.manylinux2010_x86_64.whl.metadata (2.0 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting soupsieve==2.2.1 (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading soupsieve-2.2.1-py3-none-any.whl.metadata (5.5 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting yapf==0.32.0 (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading yapf-0.32.0-py2.py3-none-any.whl.metadata (34 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting flake8 (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading flake8-7.1.1-py2.py3-none-any.whl.metadata (3.8 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting pep8 (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading pep8-1.7.1-py2.py3-none-any.whl.metadata (22 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting mypy (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading mypy-1.14.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_28_x86_64.whl.metadata (2.1 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting psutil (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading psutil-6.1.1-cp36-abi3-manylinux_2_12_x86_64.manylinux2010_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (22 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting toml (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading toml-0.10.2-py2.py3-none-any.whl.metadata (7.1 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting pytest (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading pytest-8.3.4-py3-none-any.whl.metadata (7.5 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting sphinx==6.0.0 (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading sphinx-6.0.0-py3-none-any.whl.metadata (6.2 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting sphinx_rtd_theme (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading sphinx_rtd_theme-3.0.2-py2.py3-none-any.whl.metadata (4.4 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting configparser (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading configparser-7.1.0-py3-none-any.whl.metadata (5.4 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting coverage (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading coverage-7.6.10-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.2 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting atheris (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading atheris-2.3.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (17 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Requirement already satisfied: setuptools>=65.5.1 in /usr/local/lib/python3.10/site-packages (from fuzz-introspector==0.1.3) (75.8.0) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting tqdm (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading tqdm-4.67.1-py3-none-any.whl.metadata (57 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Requirement already satisfied: rust-demangler in /usr/local/lib/python3.10/site-packages (from fuzz-introspector==0.1.3) (1.0) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting tree-sitter (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading tree_sitter-0.24.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.8 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting tree-sitter-python (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading tree_sitter_python-0.23.6-cp39-abi3-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.9 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting networkx (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading networkx-3.4.2-py3-none-any.whl.metadata (6.3 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting tree-sitter-languages (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading tree_sitter_languages-1.10.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (10 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting tree-sitter-c (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading tree_sitter_c-0.23.4-cp39-abi3-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.7 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting tree-sitter-cpp (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading tree_sitter_cpp-0.23.4-cp39-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.8 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Collecting tree-sitter-go (from fuzz-introspector==0.1.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Downloading tree_sitter_go-0.23.4-cp39-abi3-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.7 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Requirement already satisfied: contourpy>=1.0.1 in /usr/local/lib/python3.10/site-packages (from matplotlib==3.7.5->fuzz-introspector==0.1.3) (1.3.1) Step #6 - "compile-libfuzzer-introspector-x86_64": Requirement already satisfied: cycler>=0.10 in /usr/local/lib/python3.10/site-packages (from matplotlib==3.7.5->fuzz-introspector==0.1.3) (0.12.1) Step #6 - "compile-libfuzzer-introspector-x86_64": Requirement already satisfied: fonttools>=4.22.0 in /usr/local/lib/python3.10/site-packages (from matplotlib==3.7.5->fuzz-introspector==0.1.3) (4.55.3) Step #6 - "compile-libfuzzer-introspector-x86_64": Requirement already satisfied: kiwisolver>=1.0.1 in /usr/local/lib/python3.10/site-packages (from matplotlib==3.7.5->fuzz-introspector==0.1.3) (1.4.8) Step #6 - 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"compile-libfuzzer-introspector-x86_64": Downloading urllib3-2.3.0-py3-none-any.whl (128 kB) Step #6 - "compile-libfuzzer-introspector-x86_64": Building wheels for collected packages: fuzz-introspector Step #6 - "compile-libfuzzer-introspector-x86_64": Building wheel for fuzz-introspector (pyproject.toml) ... [?25l- done Step #6 - "compile-libfuzzer-introspector-x86_64": [?25h Created wheel for fuzz-introspector: filename=fuzz_introspector-0.1.3-py3-none-any.whl size=171395 sha256=ceabfde657073198fcc37c8259b5aedf86745260cbba874104ebcde489323323 Step #6 - "compile-libfuzzer-introspector-x86_64": Stored in directory: /tmp/pip-ephem-wheel-cache-k8494rlu/wheels/ce/ec/9e/e0f680466f0d02256e58f72aba9efaf05145b62b6274f28ccb Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully built fuzz-introspector Step #6 - "compile-libfuzzer-introspector-x86_64": Installing collected packages: yapf, snowballstemmer, pep8, atheris, urllib3, typing_extensions, tree-sitter-python, tree-sitter-go, tree-sitter-cpp, tree-sitter-c, tree-sitter, tqdm, tomli, toml, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, soupsieve, PyYAML, Pygments, pyflakes, pycodestyle, psutil, pluggy, numpy, networkx, mypy_extensions, mccabe, MarkupSafe, lxml, iniconfig, imagesize, idna, exceptiongroup, docutils, coverage, configparser, charset-normalizer, certifi, babel, alabaster, tree-sitter-languages, requests, pytest, mypy, Jinja2, flake8, beautifulsoup4, sphinx, matplotlib, sphinxcontrib-jquery, sphinx_rtd_theme, fuzz-introspector Step #6 - "compile-libfuzzer-introspector-x86_64": Attempting uninstall: soupsieve Step #6 - "compile-libfuzzer-introspector-x86_64": Found existing installation: soupsieve 2.6 Step #6 - "compile-libfuzzer-introspector-x86_64": Uninstalling soupsieve-2.6: Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully uninstalled soupsieve-2.6 Step #6 - "compile-libfuzzer-introspector-x86_64": Attempting uninstall: PyYAML Step #6 - "compile-libfuzzer-introspector-x86_64": Found existing installation: PyYAML 6.0.2 Step #6 - "compile-libfuzzer-introspector-x86_64": Uninstalling PyYAML-6.0.2: Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully uninstalled PyYAML-6.0.2 Step #6 - "compile-libfuzzer-introspector-x86_64": Attempting uninstall: numpy Step #6 - "compile-libfuzzer-introspector-x86_64": Found existing installation: numpy 2.2.1 Step #6 - "compile-libfuzzer-introspector-x86_64": Uninstalling numpy-2.2.1: Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully uninstalled numpy-2.2.1 Step #6 - "compile-libfuzzer-introspector-x86_64": Attempting uninstall: lxml Step #6 - "compile-libfuzzer-introspector-x86_64": Found existing installation: lxml 5.3.0 Step #6 - "compile-libfuzzer-introspector-x86_64": Uninstalling lxml-5.3.0: Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully uninstalled lxml-5.3.0 Step #6 - "compile-libfuzzer-introspector-x86_64": Attempting uninstall: beautifulsoup4 Step #6 - "compile-libfuzzer-introspector-x86_64": Found existing installation: beautifulsoup4 4.12.3 Step #6 - "compile-libfuzzer-introspector-x86_64": Uninstalling beautifulsoup4-4.12.3: Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully uninstalled beautifulsoup4-4.12.3 Step #6 - "compile-libfuzzer-introspector-x86_64": Attempting uninstall: matplotlib Step #6 - "compile-libfuzzer-introspector-x86_64": Found existing installation: matplotlib 3.10.0 Step #6 - "compile-libfuzzer-introspector-x86_64": Uninstalling matplotlib-3.10.0: Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully uninstalled matplotlib-3.10.0 Step #6 - "compile-libfuzzer-introspector-x86_64": Successfully installed Jinja2-3.1.5 MarkupSafe-3.0.2 PyYAML-6.0 Pygments-2.19.1 alabaster-0.7.16 atheris-2.3.0 babel-2.16.0 beautifulsoup4-4.10.0 certifi-2024.12.14 charset-normalizer-3.4.1 configparser-7.1.0 coverage-7.6.10 docutils-0.19 exceptiongroup-1.2.2 flake8-7.1.1 fuzz-introspector-0.1.3 idna-3.10 imagesize-1.4.1 iniconfig-2.0.0 lxml-4.9.1 matplotlib-3.7.5 mccabe-0.7.0 mypy-1.14.1 mypy_extensions-1.0.0 networkx-3.4.2 numpy-1.26.4 pep8-1.7.1 pluggy-1.5.0 psutil-6.1.1 pycodestyle-2.12.1 pyflakes-3.2.0 pytest-8.3.4 requests-2.32.3 snowballstemmer-2.2.0 soupsieve-2.2.1 sphinx-6.0.0 sphinx_rtd_theme-3.0.2 sphinxcontrib-applehelp-2.0.0 sphinxcontrib-devhelp-2.0.0 sphinxcontrib-htmlhelp-2.1.0 sphinxcontrib-jquery-4.1 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-2.0.0 sphinxcontrib-serializinghtml-2.0.0 toml-0.10.2 tomli-2.2.1 tqdm-4.67.1 tree-sitter-0.24.0 tree-sitter-c-0.23.4 tree-sitter-cpp-0.23.4 tree-sitter-go-0.23.4 tree-sitter-languages-1.10.2 tree-sitter-python-0.23.6 typing_extensions-4.12.2 urllib3-2.3.0 yapf-0.32.0 Step #6 - "compile-libfuzzer-introspector-x86_64": WARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager, possibly rendering your system unusable.It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv. Use the --root-user-action option if you know what you are doing and want to suppress this warning. Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:07:29.741 INFO main - main: Running fuzz introspector post-processing Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:07:31.902 INFO analysis - extract_tests_from_directories: All test files Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:07:31.902 INFO analysis - extract_tests_from_directories: /src/openbabel/test/unitcell.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:07:31.903 INFO analysis - extract_tests_from_directories: /src/openbabel/test/smilestest.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:07:31.903 INFO analysis - extract_tests_from_directories: /src/openbabel/test/cansmi.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:07:31.903 INFO analysis - extract_tests_from_directories: /src/openbabel/test/phmodel.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:07:31.903 INFO analysis - 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"compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obfitall.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obfragment-index.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obfragment.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obgen.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obgrep.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obminimize.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obmm.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obprobe.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obprop.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obrms.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obrotamer.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obrotate.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obseq.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obsort-fragment.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obspectrophore.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obsym.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obtautomer.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obthermo.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obtorsion.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/obxyz.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": light/source_files/src/openbabel/tools/svgdepict.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64": sent 24,050,044 bytes received 13,828 bytes 48,127,744.00 bytes/sec Step #6 - "compile-libfuzzer-introspector-x86_64": total size is 23,996,250 speedup is 1.00 Step #6 - "compile-libfuzzer-introspector-x86_64": --------------------------------------------------------------- Step #6 - "compile-libfuzzer-introspector-x86_64": CC=clang Step #6 - "compile-libfuzzer-introspector-x86_64": CXX=clang++ Step #6 - "compile-libfuzzer-introspector-x86_64": CFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=enum-constexpr-conversion -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -O0 -flto -fno-inline-functions -fuse-ld=gold -Wno-unused-command-line-argument -fsanitize=fuzzer-no-link -g Step #6 - "compile-libfuzzer-introspector-x86_64": CXXFLAGS=-O1 -fno-omit-frame-pointer -gline-tables-only -Wno-error=enum-constexpr-conversion -Wno-error=incompatible-function-pointer-types -Wno-error=int-conversion -Wno-error=deprecated-declarations -Wno-error=implicit-function-declaration -Wno-error=implicit-int -Wno-error=vla-cxx-extension -DFUZZING_BUILD_MODE_UNSAFE_FOR_PRODUCTION -O0 -flto -fno-inline-functions -fuse-ld=gold -Wno-unused-command-line-argument -fsanitize=fuzzer-no-link -stdlib=libc++ -g Step #6 - "compile-libfuzzer-introspector-x86_64": RUSTFLAGS=-Cdebuginfo=2 -Cforce-frame-pointers Step #6 - "compile-libfuzzer-introspector-x86_64": --------------------------------------------------------------- Step #6 - "compile-libfuzzer-introspector-x86_64": + mkdir build Step #6 - "compile-libfuzzer-introspector-x86_64": + cd build Step #6 - "compile-libfuzzer-introspector-x86_64": + cmake .. -DBUILD_SHARED=OFF -DBUILD_MIXED=ON Step #6 - "compile-libfuzzer-introspector-x86_64": CMake Deprecation Warning at CMakeLists.txt:3 (cmake_minimum_required): Step #6 - "compile-libfuzzer-introspector-x86_64": Compatibility with CMake < 3.5 will be removed from a future version of Step #6 - "compile-libfuzzer-introspector-x86_64": CMake. Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64": Update the VERSION argument value or use a ... suffix to tell Step #6 - "compile-libfuzzer-introspector-x86_64": CMake that the project does not need compatibility with older versions. Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64":  Step #6 - "compile-libfuzzer-introspector-x86_64": -- The C compiler identification is Clang 18.1.8 Step #6 - "compile-libfuzzer-introspector-x86_64": -- The CXX compiler identification is Clang 18.1.8 Step #6 - "compile-libfuzzer-introspector-x86_64": -- Detecting C compiler ABI info Step #6 - "compile-libfuzzer-introspector-x86_64": -- Detecting C compiler ABI info - done Step #6 - "compile-libfuzzer-introspector-x86_64": -- Check for working C compiler: /usr/local/bin/clang - skipped Step #6 - "compile-libfuzzer-introspector-x86_64": -- Detecting C compile features Step #6 - "compile-libfuzzer-introspector-x86_64": -- Detecting C compile features - done Step #6 - "compile-libfuzzer-introspector-x86_64": -- Detecting CXX compiler ABI info Step #6 - "compile-libfuzzer-introspector-x86_64": -- Detecting CXX compiler ABI info - done Step #6 - "compile-libfuzzer-introspector-x86_64": -- Check for working CXX compiler: /usr/local/bin/clang++ - skipped Step #6 - "compile-libfuzzer-introspector-x86_64": -- Detecting CXX compile features Step #6 - "compile-libfuzzer-introspector-x86_64": -- Detecting CXX compile features - done Step #6 - "compile-libfuzzer-introspector-x86_64": CMake Deprecation Warning at CMakeLists.txt:14 (cmake_policy): Step #6 - "compile-libfuzzer-introspector-x86_64": The OLD behavior for policy CMP0042 will be removed from a future version Step #6 - "compile-libfuzzer-introspector-x86_64": of CMake. Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64": The cmake-policies(7) manual explains that the OLD behaviors of all Step #6 - "compile-libfuzzer-introspector-x86_64": policies are deprecated and that a policy should be set to OLD only under Step #6 - "compile-libfuzzer-introspector-x86_64": specific short-term circumstances. Projects should be ported to the NEW Step #6 - "compile-libfuzzer-introspector-x86_64": behavior and not rely on setting a policy to OLD. Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64":  Step #6 - "compile-libfuzzer-introspector-x86_64": -- Using included inchi library. Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find LibXml2 (missing: LIBXML2_LIBRARY LIBXML2_INCLUDE_DIR) Step #6 - "compile-libfuzzer-introspector-x86_64": CMake Warning at CMakeLists.txt:164 (message): Step #6 - "compile-libfuzzer-introspector-x86_64": libxml2 not found - disabling CML support! Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64":  Step #6 - "compile-libfuzzer-introspector-x86_64": -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.a (found version "1.2.11") Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find wxWidgets (missing: wxWidgets_LIBRARIES wxWidgets_INCLUDE_DIRS) Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for conio.h Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for conio.h - not found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for sys/time.h Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for sys/time.h - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for time.h Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for time.h - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for strings.h Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for strings.h - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for regex.h Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for regex.h - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for C++ include sstream Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for C++ include sstream - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for rint Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for rint - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for snprintf Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for snprintf - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for sranddev Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for sranddev - not found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for strcasecmp Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for strcasecmp - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for strncasecmp Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for strncasecmp - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for xdrstdio_create Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for xdrstdio_create - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for dlopen in dl Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for dlopen in dl - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for sys/types.h Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for sys/types.h - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for stdint.h Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for stdint.h - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for stddef.h Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for stddef.h - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- Check size of clock_t Step #6 - "compile-libfuzzer-introspector-x86_64": -- Check size of clock_t - done Step #6 - "compile-libfuzzer-introspector-x86_64": -- Performing Test SCANDIR_NEEDS_CONST Step #6 - "compile-libfuzzer-introspector-x86_64": -- Performing Test SCANDIR_NEEDS_CONST - Failed Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find Boost (missing: Boost_INCLUDE_DIR program_options iostreams) Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0") Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find Eigen2 (missing: EIGEN2_INCLUDE_DIR EIGEN2_VERSION_OK) (Required is at least version "2.0.0") Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find Boost (missing: Boost_INCLUDE_DIR filesystem iostreams unit_test_framework) Step #6 - "compile-libfuzzer-introspector-x86_64": -- Maestro formats will NOT be supported. Please install Boost to enable Maestro formats. Step #6 - "compile-libfuzzer-introspector-x86_64": -- Coordinate generation with Coordgen will NOT be supported. Please install Boost to enable Maestro formats. Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find RapidJSON (missing: RAPIDJSON_INCLUDE_DIRS) (Required is at least version "1.1.0") Step #6 - "compile-libfuzzer-introspector-x86_64": -- Downloaded RapidJSON to /src/openbabel/external/rapidjson-7c73dd7de7c4f14379b781418c6e947ad464c818. Step #6 - "compile-libfuzzer-introspector-x86_64": -- JSON formats will be supported. Using RapidJSON 7c73dd7de7c4f14379b781418c6e947ad464c818 at /src/openbabel/external/rapidjson-7c73dd7de7c4f14379b781418c6e947ad464c818/include Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find Cairo (missing: CAIRO_LIBRARIES CAIRO_INCLUDE_DIRS) Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find Cairo. PNG output will NOT be supported. Step #6 - "compile-libfuzzer-introspector-x86_64": -- Found Perl: /usr/bin/perl (found version "5.30.0") Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find Boost (missing: Boost_INCLUDE_DIR system) (Required is at least version "1.45.0") Step #6 - "compile-libfuzzer-introspector-x86_64": -- Performing Test CMAKE_HAVE_LIBC_PTHREAD Step #6 - "compile-libfuzzer-introspector-x86_64": -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success Step #6 - "compile-libfuzzer-introspector-x86_64": -- Found Threads: TRUE Step #6 - "compile-libfuzzer-introspector-x86_64": -- Could NOT find Boost (missing: Boost_INCLUDE_DIR program_options iostreams) Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for getopt Step #6 - "compile-libfuzzer-introspector-x86_64": -- Looking for getopt - found Step #6 - "compile-libfuzzer-introspector-x86_64": -- GUI will not be built Step #6 - "compile-libfuzzer-introspector-x86_64": CMake Warning (dev) at cmake/modules/UsePythonTest.cmake:29 (FIND_PACKAGE): Step #6 - "compile-libfuzzer-introspector-x86_64": Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules Step #6 - "compile-libfuzzer-introspector-x86_64": are removed. Run "cmake --help-policy CMP0148" for policy details. Use Step #6 - "compile-libfuzzer-introspector-x86_64": the cmake_policy command to set the policy and suppress this warning. Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64": Call Stack (most recent call first): Step #6 - "compile-libfuzzer-introspector-x86_64": test/CMakeLists.txt:233 (include) Step #6 - "compile-libfuzzer-introspector-x86_64": This warning is for project developers. Use -Wno-dev to suppress it. Step #6 - "compile-libfuzzer-introspector-x86_64":  Step #6 - "compile-libfuzzer-introspector-x86_64": -- Found PythonInterp: /usr/local/bin/python (found version "3.10.14") Step #6 - "compile-libfuzzer-introspector-x86_64": CMake Deprecation Warning at scripts/CMakeLists.txt:1 (cmake_minimum_required): Step #6 - "compile-libfuzzer-introspector-x86_64": Compatibility with CMake < 3.5 will be removed from a future version of Step #6 - "compile-libfuzzer-introspector-x86_64": CMake. Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64": Update the VERSION argument value or use a ... suffix to tell Step #6 - "compile-libfuzzer-introspector-x86_64": CMake that the project does not need compatibility with older versions. Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64":  Step #6 - "compile-libfuzzer-introspector-x86_64": -- Configuring done (3.8s) Step #6 - "compile-libfuzzer-introspector-x86_64": -- Generating done (0.1s) Step #6 - "compile-libfuzzer-introspector-x86_64": -- Build files have been written to: /src/openbabel/build Step #6 - "compile-libfuzzer-introspector-x86_64": ++ nproc Step #6 - "compile-libfuzzer-introspector-x86_64": + make -j 32 Step #6 - "compile-libfuzzer-introspector-x86_64": [ 0%] Generating atomtyp.h Step #6 - "compile-libfuzzer-introspector-x86_64": [ 0%] Generating bondtyp.h Step #6 - "compile-libfuzzer-introspector-x86_64": [ 1%] Generating phmodeldata.h Step #6 - "compile-libfuzzer-introspector-x86_64": [ 1%] Generating resdata.h Step #6 - "compile-libfuzzer-introspector-x86_64": [ 1%] Generating torlib.h Step #6 - "compile-libfuzzer-introspector-x86_64": [ 1%] Generating atomizationenergies.h Step #6 - "compile-libfuzzer-introspector-x86_64": [ 2%] Generating types.h Step #6 - "compile-libfuzzer-introspector-x86_64": [ 2%] Generating spacegroups.h Step #6 - "compile-libfuzzer-introspector-x86_64": [ 2%] Generating ringtyp.h Step #6 - "compile-libfuzzer-introspector-x86_64": [ 2%] Built target data_headers Step #6 - "compile-libfuzzer-introspector-x86_64": [ 2%] Building CXX object src/CMakeFiles/openbabel.dir/alias.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/atom.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/base.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 3%] Building CXX object src/CMakeFiles/openbabel.dir/bitvec.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/bond.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/bondtyper.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 4%] Building CXX object src/CMakeFiles/openbabel.dir/builder.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/chains.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/canon.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 5%] Building CXX object src/CMakeFiles/openbabel.dir/chargemodel.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/data.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/data_utilities.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 6%] Building CXX object src/CMakeFiles/openbabel.dir/descriptor.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/elements.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprint.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 7%] Building CXX object src/CMakeFiles/openbabel.dir/forcefield.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/format.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/generic.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 8%] Building CXX object src/CMakeFiles/openbabel.dir/graphsym.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/grid.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/griddata.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 9%] Building CXX object src/CMakeFiles/openbabel.dir/isomorphism.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/kekulize.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/locale.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/matrix.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 10%] Building CXX object src/CMakeFiles/openbabel.dir/molchrg.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/mcdlutil.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 11%] Building CXX object src/CMakeFiles/openbabel.dir/mol.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/obiter.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 12%] Building CXX object src/CMakeFiles/openbabel.dir/obfunctions.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/obconversion.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/oberror.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/obutil.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": In file included from /src/openbabel/src/grid.cpp:24: Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:118:11: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 118 | if (_ival) delete [] _ival; Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": In file included from /src/openbabel/src/grid.cpp:24: Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:118:28: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 118 | if (_ival) delete [] _ival; Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/grid.cpp:82:5: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 82 | _ival=nullptr; Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": In file included from /src/openbabel/src/griddata.cpp:27: Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:118:11: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 118 | if (_ival) delete [] _ival; Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": In file included from /src/openbabel/src/griddata.cpp:27: Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:118:28: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 118 | if (_ival) delete [] _ival; Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/molchrg.cpp:297:10: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 297 | if (!IsNearZero(val[2])) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/bond.cpp:124:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 124 | if (IsNearZero(v3.length_2())) { // too small to normalize, move the atoms apart Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 13%] Building CXX object src/CMakeFiles/openbabel.dir/op.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/parsmart.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/patty.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/atom.cpp:826:62: warning: 'PathSize' is deprecated: Use Size() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 826 | if ((*i)->IsInRing(GetIdx()) && static_cast((*i)->PathSize()) == size) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/ring.h:65:5: note: 'PathSize' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 65 | OB_DEPRECATED_MSG("Use Size() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": In file included from /src/openbabel/src/forcefield.cpp:34: Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:118:11: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 118 | if (_ival) delete [] _ival; Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[d/src/openbabel/src/atom.cpp:1143:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1143 | eprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": In file included from /src/openbabel/src/forcefield.cpp:34: Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:118:28: warning: '_ival' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 118 | if (_ival) delete [] _ival; Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/grid.h:105:5: note: '_ival' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 105 | OB_DEPRECATED int *_ival; //!< for integer values \deprecated Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[depr e c a tiefd ](]Is Step #6 - "compile-libfuzzer-introspector-x86_64": N e| ar ^Zero(v1 Step #6 - "compile-libfuzzer-introspector-x86_64": .length(), 1.0e-3) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/atom.cpp:1144:10: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1144 | || IsNearZero(v2.length(), 1.0e-3)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:482:31: warning: 'VectorLengthDerivative' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 482 | rab = OBForceField::VectorLengthDerivative(da, db); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/forcefield.h:1523:5: note: 'VectorLengthDerivative' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 1523 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:499:33: warning: 'VectorAngleDerivative' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 499 | theta = OBForceField::VectorAngleDerivative(da, db, dc); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/forcefield.h:1539:5: note: 'VectorAngleDerivative' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 1539 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:518:33: warning: 'VectorTorsionDerivative' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 518 | theta = OBForceField::VectorTorsionDerivative(da, db, dc, dd); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/forcefield.h:1572:5: note: 'VectorTorsionDerivative' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 1572 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": In file included from /src/openbabel/src/obconversion.cpp:53: Step #6 - "compile-libfuzzer-introspector-x86_64": In file included from /src/openbabel/src/zipstream.h:333: Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/zipstreamimpl.h:179:9: warning: reference cannot be bound to dereferenced null pointer in well-defined C++ code; pointer may be assumed to always convert to true [-Wundefined-bool-conversion] Step #6 - "compile-libfuzzer-introspector-x86_64": 179 | if(&_ostream) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~ ^~~~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/zipstreamimpl.h:86:5: note: in instantiation of member function 'zlib_stream::basic_zip_streambuf::flush' requested here Step #6 - "compile-libfuzzer-introspector-x86_64": 86 | flush(); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/zipstreamimpl.h:620:35: note: in instantiation of member function 'zlib_stream::basic_zip_streambuf::~basic_zip_streambuf' requested here Step #6 - "compile-libfuzzer-introspector-x86_64": 620 | basic_zip_ostream::basic_zip_ostream(ostream_reference ostream, Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/obconversion.cpp:395:46: note: in instantiation of member function 'zlib_stream::basic_zip_ostream::basic_zip_ostream' requested here Step #6 - "compile-libfuzzer-introspector-x86_64": 395 | zlib_stream::zip_ostream *zOut = new zlib_stream::zip_ostream(*pOutput, true); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 14%] Building CXX object src/CMakeFiles/openbabel.dir/phmodel.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:1180:8: warning: 'SetFixAtoms' is deprecated: See SetFixedBonds() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1180 | rl.SetFixAtoms(fixed);/src/openbabel/src/mcdlutil.cpp:5032: Step #6 - "compile-libfuzzer-introspector-x86_64": | 95: warning: add explicit braces to avoid dangling else [-Wdangling-else] Step #6 - "compile-libfuzzer-introspector-x86_64":  ^ Step #6 - "compile-libfuzzer-introspector-x86_64":  5032 | i/src/openbabel/include/openbabel/rotor.h:633:5f (test2) f:o r (j=0; jnBonds(); note: j++) if (bSTested[j]>'SetFixAtoms' has been explicitly marked deprecated here=0) (*bondLa Step #6 - "compile-libfuzzer-introspector-x86_64": bel)[ 633j]=1; else (*bo | ndLabel)[j ]=0; Step #6 - "compile-libfuzzer-introspector-x86_64": O|  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": B_DEPRECATED_MSG("See SetFixedBonds()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:1193:32: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1193 | combinations *= rotor->GetResolution().size(); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:1213:33: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1213 | rotorKeys.AddRotor(rotor->GetResolution().size()); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:1301:8: warning: 'SetFixAtoms' is deprecated: See SetFixedBonds() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1301 | rl.SetFixAtoms(fixed); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:633:5: note: 'SetFixAtoms' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 633 | OB_DEPRECATED_MSG("See SetFixedBonds()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:310:19: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 310 | if (bond2 == VZero || v1 == VZero) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:310:34: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 310 | if (bond2 == VZero || v1 == VZero) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:359:21: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 359 | if (bond1 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:361:26: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 361 | else if (bond2 == V/src/openbabel/src/forcefield.cpp:1372:32: Zero) Step #6 - "compile-libfuzzer-introspector-x86_64": warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations]|  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: Step #6 - "compile-libfuzzer-introspector-x86_64": 1372 | for note: 'operator==' has been explicitly marked deprecated here(j = 0; Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEP j < rotRECATEDor->G_eMStG(R"eUssoel uvteicotno(r)3.:s:iIzse()A;p pjr+o+x)( ){ i/n/s tFeoard .e"a)ch Step #6 - "compile-libfuzzer-introspector-x86_64": r| ot ^o Step #6 - "compile-libfuzzer-introspector-x86_64": r po/src/openbabel/build/include/openbabel/babelconfig.hs:i38t:i38o:n  Step #6 - "compile-libfuzzer-introspector-x86_64": note:  expanded from macro 'OB_DEPRECATED_MSG'|  Step #6 - "compile-libfuzzer-introspector-x86_64": ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | /src/openbabel/include/openbabel/rotor.h#:d449e:f5i:n e OBnote: _D'GetResolution' has been explicitly marked deprecated hereEP Step #6 - "compile-libfuzzer-introspector-x86_64": R EC449A | T E D _ MOSGB(_mDsEgP)R E[C[AdTeEpDr_eMcSaGt(e"dS(emes gG)e]t]To Step #6 - "compile-libfuzzer-introspector-x86_64": r s| io ^n Step #6 - "compile-libfuzzer-introspector-x86_64": Values()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:430:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 430 | if (bond1 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define O/src/openbabel/src/forcefield.cpp:1444:8: warning: 'SetFixAtoms' is deprecated: See SetFixedBonds() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1444 | B_DEPRECATED_MSG(msg) [[deprecated(msg) rl].SetFixAtoms(fixed); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": ] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:633:5: note: 'SetFixAtoms' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 633 | OB_DEPRECATED_MSG("See SetFixedBonds()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:432 :28: warning: 38 | #de'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": fine OB_DEPRECATED_MSG(msg) [432 | [depreca ted(msg)else if ]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": (bond2 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | O/src/openbabel/src/forcefield.cpp:1457:32: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1457 | combinations *= rotor->GetResolution().size(); Step #6 - "compile-libfuzzer-introspector-x86_64": | B_DEPRECA ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:449:T5: ED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:434:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 434 | else if (bond3 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApnote: 'GetResolution' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": prox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:1482:52: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1482 | rotorKey[i] = generator.NextInt() % rotor->GetResolution().size(); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 449 | /src/openbabel/src/builder.cpp:450:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": OB_DEPRECATED_MSG("See GetTorsionValues()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 450 | if (bond1 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:1622:8: warning: 'SetFixAtoms' is deprecated: See SetFixedBonds() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1622 | rl.SetFix/src/openbabel/src/builder.cppA:t452o:m28s:( fixwarning: ed)'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations]; Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64": | 452 ^ | Step #6 - "compile-libfuzzer-introspector-x86_64":   /src/openbabel/include/openbabel/rotor.h : 633 : 5 : elnote: se'SetFixAtoms' has been explicitly marked deprecated here i Step #6 - "compile-libfuzzer-introspector-x86_64": f ( b633o | n d 2 =O=B _VDZEePrRoE)CA Step #6 - "compile-libfuzzer-introspector-x86_64": T E| D_ ^M Step #6 - "compile-libfuzzer-introspector-x86_64": SG("/src/openbabel/include/openbabel/math/vector3.hS:e273e: 5S:e tFinote: xe'operator==' has been explicitly marked deprecated heredB Step #6 - "compile-libfuzzer-introspector-x86_64": ond s273( | ) " )  Step #6 - "compile-libfuzzer-introspector-x86_64": O B| _D ^E Step #6 - "compile-libfuzzer-introspector-x86_64": PRECAT/src/openbabel/build/include/openbabel/babelconfig.hE:D38_:M38S:G ("Unote: seexpanded from macro 'OB_DEPRECATED_MSG' v Step #6 - "compile-libfuzzer-introspector-x86_64": ect o38r | 3::IsA p p r o#xdefin(e) OiBn_sDtEePaRdE.C"A)TE Step #6 - "compile-libfuzzer-introspector-x86_64": D _| MS ^G Step #6 - "compile-libfuzzer-introspector-x86_64": (msg)/src/openbabel/build/include/openbabel/babelconfig.h :[38[:d38e:p recnote: atexpanded from macro 'OB_DEPRECATED_MSG'ed Step #6 - "compile-libfuzzer-introspector-x86_64": ( m38s | g ) ] ] # Step #6 - "compile-libfuzzer-introspector-x86_64": d e| fi ^n Step #6 - "compile-libfuzzer-introspector-x86_64": e OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:1635:32: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1635 | com/src/openbabel/src/builder.cppb:i454n:at28i:o ns warning: *= 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations]ro Step #6 - "compile-libfuzzer-introspector-x86_64": tor -454> | G e t R e s o l u t i o ne(l)s.es iizfe (()b;on Step #6 - "compile-libfuzzer-introspector-x86_64": d 3| = ^= Step #6 - "compile-libfuzzer-introspector-x86_64": VZero/src/openbabel/include/openbabel/rotor.h):449 Step #6 - "compile-libfuzzer-introspector-x86_64": : 5| : ^ Step #6 - "compile-libfuzzer-introspector-x86_64": note: /src/openbabel/include/openbabel/math/vector3.h'GetResolution' has been explicitly marked deprecated here:273 Step #6 - "compile-libfuzzer-introspector-x86_64": :5 :449 |   note:  'operator==' has been explicitly marked deprecated hereOB Step #6 - "compile-libfuzzer-introspector-x86_64": _ D273E | P R E C AOTBE_DD_EMPSRGE(C"ASTeEeD _GMeStGT(o"rUssieo nValues()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": vect/src/openbabel/build/include/openbabel/babelconfig.ho:r383::38::I note: sAexpanded from macro 'OB_DEPRECATED_MSG'pp Step #6 - "compile-libfuzzer-introspector-x86_64": ro x38( | ) i n s#tdeeafdi.n"e) O Step #6 - "compile-libfuzzer-introspector-x86_64": B _| DE ^P Step #6 - "compile-libfuzzer-introspector-x86_64": REC/src/openbabel/build/include/openbabel/babelconfig.hA:T38E:D38_:M SG(note: msexpanded from macro 'OB_DEPRECATED_MSG'g) Step #6 - "compile-libfuzzer-introspector-x86_64": [[d e38p | r e c a t#edde(fmisnge) ]O]B_ Step #6 - "compile-libfuzzer-introspector-x86_64": D E| PR ^E Step #6 - "compile-libfuzzer-introspector-x86_64": CATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:1685:43: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1685 | for (unsigned int j = 0; j < rotor->GetResolution().size(); j++) {/src/openbabel/src/builder.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": : 469| :23 ^: Step #6 - "compile-libfuzzer-introspector-x86_64": warning: /src/openbabel/include/openbabel/rotor.h:'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations]449: Step #6 - "compile-libfuzzer-introspector-x86_64": 5:  469note: |  'GetResolution' has been explicitly marked deprecated here  Step #6 - "compile-libfuzzer-introspector-x86_64": 449 | OiBf_ D(EbPoRnEdC1A T=E=D _VMZSeGr(o")Se Step #6 - "compile-libfuzzer-introspector-x86_64": e | Ge ^t Step #6 - "compile-libfuzzer-introspector-x86_64": Torsi/src/openbabel/include/openbabel/math/vector3.ho:n273V:a5l:u es(note: )"'operator==' has been explicitly marked deprecated here) Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64": 273| |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64":  OB/src/openbabel/build/include/openbabel/babelconfig.h:_38D:E38P:R ECAnote: TEexpanded from macro 'OB_DEPRECATED_MSG'D_ Step #6 - "compile-libfuzzer-introspector-x86_64": MS G38( | " U s e #vdeecftionre3 :O:BI_sDAEpPpRrEoCxA(T)E Di_nMsStGe(amds.g")) [ Step #6 - "compile-libfuzzer-introspector-x86_64": [ d| ep ^r Step #6 - "compile-libfuzzer-introspector-x86_64": ecat/src/openbabel/build/include/openbabel/babelconfig.he:d38(:m38s:g )]]note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64":  Step #6 - "compile-libfuzzer-introspector-x86_64": | 38 | ^ Step #6 - "compile-libfuzzer-introspector-x86_64":  #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:471:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 471 | else if (bond2 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:473:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 473 | else if (bond3 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:1712:43: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1712 | for (unsigned int j = 0; j < rotor->GetResolution().size(); j++) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:494:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 494 | if (bond1 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_M/src/openbabel/src/forcefield.cppSG(msg) [[d:e1719p:r43ecated(m: warning: sg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1719 | for (unsigned int j = 0; j < rotor->G |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": etResolution().size(); j++) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 449 | OB_DEPRECATED_MSG(/src/openbabel/src/builder.cpp:496:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 496 | else i"fS ee (GbeotnTdo2r s=i=o nVVZaelureos)() Step #6 - "compile-libfuzzer-introspector-x86_64": " )|  Step #6 - "compile-libfuzzer-introspector-x86_64": ^ Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:/src/openbabel/include/openbabel/math/vector3.h38::273 :5:note: expanded from macro 'OB_DEPRECATED_MSG'note: Step #6 - "compile-libfuzzer-introspector-x86_64":  'operator==' has been explicitly marked deprecated here38 Step #6 - "compile-libfuzzer-introspector-x86_64": | 273 | # d e f iOnBe_ DOEBP_RDEECPARTEECDA_TMESDG_(M"SUGs(em svge)c t[o[rd3e:pr:eIcsaAptperdo(xm(s)g )i]n]st Step #6 - "compile-libfuzzer-introspector-x86_64": e a| d. ^" Step #6 - "compile-libfuzzer-introspector-x86_64": ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG'/src/openbabel/src/forcefield.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": : 1720:1338: |   warning: #d'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations]efi Step #6 - "compile-libfuzzer-introspector-x86_64": n e 1720O | B _ D E P R E C AiTfE D(_IMsSNGe(amrs(gw)o r[s[tdEe,pr ebceasttEe,d (1m.s0ge)-]3])) Step #6 - "compile-libfuzzer-introspector-x86_64":  Step #6 - "compile-libfuzzer-introspector-x86_64": | | ^ Step #6 - "compile-libfuzzer-introspector-x86_64": ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:498:28: /src/openbabel/src/forcefield.cppwarning: :1721:'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations]31: Step #6 - "compile-libfuzzer-introspector-x86_64": warning: 498 |  'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations]  Step #6 - "compile-libfuzzer-introspector-x86_64": 1721 | e l s e i fw e(ibgohntd 3= =1= /V Zreortoo)r- Step #6 - "compile-libfuzzer-introspector-x86_64": > G| et ^R Step #6 - "compile-libfuzzer-introspector-x86_64": esolu/src/openbabel/include/openbabel/math/vector3.ht:io273n:(5).si:z e()note: ;'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64":  Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 273 |  /src/openbabel/include/openbabel/rotor.h O:B449_:D5E:P RECnote: A'GetResolution' has been explicitly marked deprecated hereTE Step #6 - "compile-libfuzzer-introspector-x86_64": D _MS449G | ( " U s eO Bv_eDcEtPoRrE3C:A:TIEsDA_pMpSrGo(x"(S)e ei nGsetteTaodr.s"i)on Step #6 - "compile-libfuzzer-introspector-x86_64": V a| lu ^e Step #6 - "compile-libfuzzer-introspector-x86_64": s()"/src/openbabel/build/include/openbabel/babelconfig.h):38 Step #6 - "compile-libfuzzer-introspector-x86_64": : 38| : ^ Step #6 - "compile-libfuzzer-introspector-x86_64": note: expanded from macro 'OB_DEPRECATED_MSG'/src/openbabel/build/include/openbabel/babelconfig.h: Step #6 - "compile-libfuzzer-introspector-x86_64": 38 :3838:  |  note:  expanded from macro 'OB_DEPRECATED_MSG' # Step #6 - "compile-libfuzzer-introspector-x86_64": d ef38i | n e O B_#DdEePfRiEnCeA TOEBD__DMESPGR(EmCsAgT)E D[_[MdSeGp(rmescga)t e[d(m[sdge)p]r]ec Step #6 - "compile-libfuzzer-introspector-x86_64": a t| ed ^( Step #6 - "compile-libfuzzer-introspector-x86_64": msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:1761:45: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1761 | for (unsigned int j = 0; j < rotor->GetResolution().size(); j++) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 449 | OB_DEPRECA/src/openbabel/src/builder.cppTE:514:D_M23S:G ("Swarning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": ee G etT514o | r s i o nV a l ues() " i)f Step #6 - "compile-libfuzzer-introspector-x86_64": ( b| on ^d Step #6 - "compile-libfuzzer-introspector-x86_64": 1 == /src/openbabel/build/include/openbabel/babelconfig.hV:Z38e:r38o:)  Step #6 - "compile-libfuzzer-introspector-x86_64":  note: | expanded from macro 'OB_DEPRECATED_MSG' ^ Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64":  38 | /src/openbabel/include/openbabel/math/vector3.h : 273 :#5d:e finnote: e 'operator==' has been explicitly marked deprecated hereOB Step #6 - "compile-libfuzzer-introspector-x86_64": _ DE273P | R E C A TOEBD__DMESPGR(EmCsAgT)E D[_[MdSeGp(r"eUcsaet evde(cmtosrg3):]:]Is Step #6 - "compile-libfuzzer-introspector-x86_64": A p| pr ^o Step #6 - "compile-libfuzzer-introspector-x86_64": x() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:516:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 516 | else if (bond2 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:518:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 518 | else if (bond3 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:520:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 520 | else if (bond4 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:533:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 533 | if (bond1 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:535:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 535 | else if (bond2 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:537:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 537 | else if (bond3 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:539:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 539 | else if (bond4 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:564:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 564 | if (bond1 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:566:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 566 | else if (bond2 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:568:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 568 | else if (bond3 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:570:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 570 | else if (bond4 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:572:28: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 572 | else if (bond5 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/mol.cpp:2788:29: warning: 'operator!=' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2788 | if (atom->GetVector() != VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:278:5: note: 'operator!=' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 278 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/mol.cpp:2803:23: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2803 | if (!hasX && !IsNearZero(atom->x())) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/mol.cpp:2805:23: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2805 | if (!hasY && !IsNearZero(atom->y())) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:660:21: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 660 | if (bond1 == VZero) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #defi/src/openbabel/src/mol.cppn:e2826 :O23B:_ DEPwarning: REC'IsNearZero' is deprecated [-Wdeprecated-declarations]AT Step #6 - "compile-libfuzzer-introspector-x86_64": ED _2826M | S G ( m s g ) [i[fd e(p!rheacsaXt e&d&( m!sIgs)N]e]ar Step #6 - "compile-libfuzzer-introspector-x86_64": Z e| ro ^( Step #6 - "compile-libfuzzer-introspector-x86_64": atom->x())) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #[ 15%] Building CXX object src/CMakeFiles/openbabel.dir/plugin.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/mol.cpp:2828:23: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2828 | if (!hasY && !IsNearZero(atom->y())) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:718:23: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64":  /src/openbabel/src/mol.cpp718: | 2830 : 23 :   warning:   'IsNearZero' is deprecated [-Wdeprecated-declarations] i Step #6 - "compile-libfuzzer-introspector-x86_64": f (b o2830n | d 1 = = V Z er oi)f Step #6 - "compile-libfuzzer-introspector-x86_64": ( !| ha ^s Step #6 - "compile-libfuzzer-introspector-x86_64": Z &/src/openbabel/include/openbabel/math/vector3.h:&273 :!5I:s Neanote: rZ'operator==' has been explicitly marked deprecated hereer Step #6 - "compile-libfuzzer-introspector-x86_64": o (273a | t o m - >OzB(_)D)E)PR Step #6 - "compile-libfuzzer-introspector-x86_64": E C| AT ^E Step #6 - "compile-libfuzzer-introspector-x86_64": D_MS/src/openbabel/include/openbabel/obutil.hG:(197":U3s:e vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: /src/openbabel/src/builder.cppnote: :720expanded from macro 'OB_DEPRECATED':28 Step #6 - "compile-libfuzzer-introspector-x86_64": : 37 | warning:   'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] # Step #6 - "compile-libfuzzer-introspector-x86_64": de f720i | n e O B _ D E P R E C AeTlEsDe [i[fd e(pbroecatendd]2] = Step #6 - "compile-libfuzzer-introspector-x86_64": = | VZ ^e Step #6 - "compile-libfuzzer-introspector-x86_64": ro) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/pointgroup.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:1089:9: warning: 'GetFirstAtom' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1089 | mol.GetFirstAtom()->GetHyb(); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/mol.h:287:5: note: 'GetFirstAtom' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 287 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:2420:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2420 | if (IsNearZero(scale)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:2539:11: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2539 | if (IsNear(e_n2, e_n1, 1.0e-3)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:2657:11: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2657 | if (IsNear(e_n2, e_n1, 1.0e-7)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/mol.cpp:3252:24: warning: 'PathSize' is deprecated: Use Size() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3252 | if ((*ringit)->PathSize() == 5) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/ring.h:65:5: note: 'PathSize' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 65 | OB_DEPRECATED_MSG("U/src/openbabel/src/forcefield.cpp:2725se Siz:13: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2725 | if (IsNear(e_n2, e_n1, 1.0e-7)) e{( Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": ) instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38/src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here | #def Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | Oine OB_DEPBRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/mol.cpp:3274:29: warning: 'PathSize' is deprecated: Use Size() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3274 | else if ((*ringit)->PathSize() == 6) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/ring.h:65:5: note: 'PathSize' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 65 | OB_DEPRECATED_MSG("Use Size() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": _DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(m/src/openbabel/src/forcefield.cpp:2838:11: warning: sg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2838 | if (IsNear(e_n2, _e_n1, _econv) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/builder.cpp:1427:17: warning: 'operator==' is deprecated: Use vector3::IsApprox() instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1427 | if (bond1 == VZero) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/vector3.h:273:5: note: 'operator==' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | OB_DEPRECATED_MSG("Use vector3::IsApprox() instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": | /src/openbabel/src/mol.cpp:3343:31: warning:  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: 'PathSize' is deprecated: Use Size() instead [-Wdeprecated-declarations]note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64":  Step #6 - "compile-libfuzzer-introspector-x86_64": 3343 | loopSize = (*ringit)->Path38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": Size(); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/ring.h:65:5: note: 'PathSize' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 65 | OB_DEPRECATED_MSG("Use Size() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3039:11: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3039 | if (IsNear(e_n2, _e_n1, _econv) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3719:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3719 | if (IsNearZero(l_ij) || IsNearZero(l_jk)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3719:29: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3719 | if (IsNearZero(l_ij) || IsNearZero(l_jk)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3735:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3735 | if (IsNearZero(length)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3789:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3789 | if (IsNearZero(l_ij) || IsNearZero(l_jk)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3789:29: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3789 | if (IsNearZero(l_ij) || IsNearZero(l_jk)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3802:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3802 | if (IsNearZero(length)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3949:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3949 | if (IsNearZero(length_ji)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3962:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3962 | if (IsNearZero(length_jk)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3973:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3973 | if (IsNearZero(length_jl)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3991:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3991 | if (IsNearZero(theta) || IsNearZero(fabs(theta - M_PI))) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:3991:30: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 3991 | if (IsNearZero(theta) || IsNearZero(fabs(theta - M_PI))) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 15%] Building CXX object src/CMakeFiles/openbabel.dir/query.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4006:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4006 | if (IsNearZero(dl) || IsNearZero(fabs(dl - M_PI))) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4006:27: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4006 | if (IsNearZero(dl) || IsNearZero(fabs(dl - M_PI))) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4067:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4067 | if (IsNearZero(length_ji)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4076:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4076 | if (IsNearZero(length_jk)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4083:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4083 | if (IsNearZero(length_jl)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4097:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4097 | if (IsNearZero(theta) || IsNearZero(fabs(theta - M_PI))) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4097:30: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4097 | if (IsNearZero(theta) || IsNearZero(fabs(theta - M_PI))) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4195:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4195 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4195:29: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4195 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4195:49: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4195 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4285:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4285 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4285:29: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4285 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefield.cpp:4285:49: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 4285 | if (IsNearZero(l_ij) || IsNearZero(l_jk) || IsNearZero(l_kl) ) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/rand.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 3 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/reactionfacade.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 16%] Building CXX object src/CMakeFiles/openbabel.dir/residue.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 2 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/ring.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/rotamer.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/rotor.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 17%] Building CXX object src/CMakeFiles/openbabel.dir/spectrophore.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/tautomer.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/tokenst.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 18%] Building CXX object src/CMakeFiles/openbabel.dir/transform.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/typer.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/obmolecformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 19%] Building CXX object src/CMakeFiles/openbabel.dir/formats/smilesformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mdlformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mol2format.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 20%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pdbformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/formats/asciiformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 3 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/formats/copyformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 21%] Building CXX object src/CMakeFiles/openbabel.dir/formats/MNAformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/formats/molreport.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/rotor.cpp:114:14: warning: 'HasFixedAtoms' is deprecated: See HasFixedBonds() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 114 | if ((HasFixedAtoms() || HasFixedBonds()) && IsFixedBond(bond)) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:643:5: note: 'HasFixedAtoms' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 643 | OB_DEPRECATED_MSG("See HasFixedBonds()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/rotor.cpp:138:14: warning: 'SetNumCoords' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 138 | rotor->SetNumCoords(mol.NumAtoms()*3); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:452:5: note: 'SetNumCoords' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 452 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/formats/nulformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 22%] Building CXX object src/CMakeFiles/openbabel.dir/formats/painterformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/rotor.cpp:318:65: warning: 'HasFixedAtoms' is deprecated: See HasFixedBonds() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/rotamer.cpp:232:32: warning: 'GetResolution' is deprecated: See GetTorsionValues() [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 232 | _vres.push_back(rotor->GetResolution()); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:449:5: note: 'GetResolution' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 449 | OB_DEPRECATED_MSG("See GetTorsionValues()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64":  318 | if (!((OBBond*)*k)->IsRotor(_ringRotors)||((HasFixedAtoms()||HasFixedBonds())&&IsFixedBond((OBBond*)*k))) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:643:5: note: 'HasFixedAtoms' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 643 | OB_DEPRECATED_MSG("See HasFixedBonds()") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/rotor.cpp:336:16: warning: 'SetEvalAtoms' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 336 | rotor->SetEvalAtoms(eval); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:443:5: note: 'SetEvalAtoms' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 443 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/rotor.cpp:355:14: warning: 'SetDelta' is deprecated: Has no effect. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 355 | rotor->SetDelta(delta); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/rotor.h:428:5: note: 'SetDelta' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 428 | OB_DEPRECATED_MSG("Has no effect.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/formats/povrayformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/formats/reportformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 23%] Building CXX object src/CMakeFiles/openbabel.dir/formats/svgformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 24%] Building CXX object src/CMakeFiles/openbabel.dir/formats/textformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 24%] Building CXX object src/CMakeFiles/openbabel.dir/formats/titleformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 24%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pngformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 25%] Building CXX object src/CMakeFiles/openbabel.dir/formats/acesformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 25%] Building CXX object src/CMakeFiles/openbabel.dir/formats/abinitformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/mol2format.cpp:371:14: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 371 | if (!IsNearZero(pcharge)) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 25%] Building CXX object src/CMakeFiles/openbabel.dir/formats/adfformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 26%] Building CXX object src/CMakeFiles/openbabel.dir/formats/aoforceformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 26%] Building CXX object src/CMakeFiles/openbabel.dir/formats/castepformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 26%] Building CXX object src/CMakeFiles/openbabel.dir/formats/crystal09format.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 27%] Building CXX object src/CMakeFiles/openbabel.dir/formats/daltonformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 27%] Building CXX object src/CMakeFiles/openbabel.dir/formats/dmolformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 34 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 27%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fchkformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 51 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 28%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fhiaimsformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 28%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gamessformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 28%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gaussformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 29%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gausscubeformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 29%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gausszmatformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 29%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gulpformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 30%] Building CXX object src/CMakeFiles/openbabel.dir/formats/hinformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 30%] Building CXX object src/CMakeFiles/openbabel.dir/formats/jaguarformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 30%] Building CXX object src/CMakeFiles/openbabel.dir/formats/molproformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 31%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mopacformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 31%] Building CXX object src/CMakeFiles/openbabel.dir/formats/nwchemformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 31%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pwscfformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 32%] Building CXX object src/CMakeFiles/openbabel.dir/formats/qchemformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 5 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 32%] Building CXX object src/CMakeFiles/openbabel.dir/formats/siestaformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 32%] Building CXX object src/CMakeFiles/openbabel.dir/formats/turbomoleformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 33%] Building CXX object src/CMakeFiles/openbabel.dir/formats/vaspformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/adfformat.cpp:795:18: warning: 'SetLimits' is deprecated: Use vector version instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 795 | t41Data->SetLimits( gd.startPoint, gd.xAxis, gd.yAxis, gd.zAxis ); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/griddata.h:111:5: note: 'SetLimits' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 111 | OB_DEPRECATED_MSG("Use vector version instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 33%] Building CXX object src/CMakeFiles/openbabel.dir/formats/xsfformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 33%] Building CXX object src/CMakeFiles/openbabel.dir/formats/zindoformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 34%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gamessukformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 34%] Building CXX object src/CMakeFiles/openbabel.dir/formats/orcaformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 9 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 34%] Building CXX object src/CMakeFiles/openbabel.dir/formats/APIInterface.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/gausscubeformat.cpp:589:9: warning: 'GetOriginVector' is deprecated: Use GetOriginVector() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 589 | gd->GetOriginVector(origin); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/griddata.h:88:5: note: 'GetOriginVector' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 88 | OB_DEPRECATED_MSG("Use GetOriginVector() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 35%] Building CXX object src/CMakeFiles/openbabel.dir/formats/CSRformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/nwchemformat.cpp:321:24: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 321 | quadrupole.Set(i[0], i[1], value); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/nwchemformat.cpp:322:24: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 322 | quadrupole.Set(i[1], i[0], value); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/nwchemformat.cpp:310:9: warning: add explicit braces to avoid dangling else [-Wdangling-else] Step #6 - "compile-libfuzzer-introspector-x86_64": 310 | else if (vs[0][0] == '2') Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 35%] Building CXX object src/CMakeFiles/openbabel.dir/formats/PQSformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 35%] Building CXX object src/CMakeFiles/openbabel.dir/formats/MCDLformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 36%] Building CXX object src/CMakeFiles/openbabel.dir/formats/alchemyformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 36%] Building CXX object src/CMakeFiles/openbabel.dir/formats/acrformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 36%] Building CXX object src/CMakeFiles/openbabel.dir/formats/amberformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 37%] Building CXX object src/CMakeFiles/openbabel.dir/formats/balstformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 37%] Building CXX object src/CMakeFiles/openbabel.dir/formats/bgfformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 37%] Building CXX object src/CMakeFiles/openbabel.dir/formats/boxformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 37%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cacaoformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 38%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cacheformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 38%] Building CXX object src/CMakeFiles/openbabel.dir/formats/carformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 38%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cccformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 39%] Building CXX object src/CMakeFiles/openbabel.dir/formats/chem3dformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 39%] Building CXX object src/CMakeFiles/openbabel.dir/formats/chemdrawcdx.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 39%] Building CXX object src/CMakeFiles/openbabel.dir/formats/chemdrawct.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 40%] Building CXX object src/CMakeFiles/openbabel.dir/formats/chemkinformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 40%] Building CXX object src/CMakeFiles/openbabel.dir/formats/chemtoolformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 40%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cifformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 41%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cofformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 41%] Building CXX object src/CMakeFiles/openbabel.dir/formats/crkformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 41%] Building CXX object src/CMakeFiles/openbabel.dir/formats/cssrformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 42%] Building CXX object src/CMakeFiles/openbabel.dir/formats/dlpolyformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 42%] Building CXX object src/CMakeFiles/openbabel.dir/formats/exyzformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 42%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fastsearchformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 43%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fastaformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 43%] Building CXX object src/CMakeFiles/openbabel.dir/formats/featformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 43%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fhformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 3 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 44%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fingerprintformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 44%] Building CXX object src/CMakeFiles/openbabel.dir/formats/fpsformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 44%] Building CXX object src/CMakeFiles/openbabel.dir/formats/freefracformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 45%] Building CXX object src/CMakeFiles/openbabel.dir/formats/ghemicalformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 45%] Building CXX object src/CMakeFiles/openbabel.dir/formats/gromos96format.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 45%] Building CXX object src/CMakeFiles/openbabel.dir/formats/groformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 46%] Building CXX object src/CMakeFiles/openbabel.dir/formats/lmpdatformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 46%] Building CXX object src/CMakeFiles/openbabel.dir/formats/lpmdformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 46%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mdffformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 47%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mmcifformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 47%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mmodformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 47%] Building CXX object src/CMakeFiles/openbabel.dir/formats/moldenformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/chemkinformat.cpp:911:12: warning: enumeration values 'ARRHENIUS' and 'THREEBODY' not handled in switch [-Wswitch] Step #6 - "compile-libfuzzer-introspector-x86_64": 911 | switch(pRD->ReactionType) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^~~~~~~~~~~~~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 48%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mpdformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/chemkinformat.cpp:990:12: warning: enumeration values 'ARRHENIUS' and 'SRI' not handled in switch [-Wswitch] Step #6 - "compile-libfuzzer-introspector-x86_64": 990 | switch(pRD->ReactionType) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^~~~~~~~~~~~~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 48%] Building CXX object src/CMakeFiles/openbabel.dir/formats/mpqcformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 48%] Building CXX object src/CMakeFiles/openbabel.dir/formats/msiformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 49%] Building CXX object src/CMakeFiles/openbabel.dir/formats/msmsformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 49%] Building CXX object src/CMakeFiles/openbabel.dir/formats/opendxformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 49%] Building CXX object src/CMakeFiles/openbabel.dir/formats/outformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 50%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pcmodelformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 50%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pdbqtformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 50%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pointcloudformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 51%] Building CXX object src/CMakeFiles/openbabel.dir/formats/posformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 51%] Building CXX object src/CMakeFiles/openbabel.dir/formats/pqrformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 51%] Building CXX object src/CMakeFiles/openbabel.dir/formats/rinchiformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 52%] Building CXX object src/CMakeFiles/openbabel.dir/formats/rsmiformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 52%] Building CXX object src/CMakeFiles/openbabel.dir/formats/rxnformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/mdffformat.cpp:135:50: warning: variable 'path' is uninitialized when used within its own initialization [-Wuninitialized] Step #6 - "compile-libfuzzer-introspector-x86_64": 135 | string path = (found == string::npos) ? "" : path.substr(0, found); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~~~ ^~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 52%] Building CXX object src/CMakeFiles/openbabel.dir/formats/shelxformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 53%] Building CXX object src/CMakeFiles/openbabel.dir/formats/smileyformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 53%] Building CXX object src/CMakeFiles/openbabel.dir/formats/stlformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 53%] Building CXX object src/CMakeFiles/openbabel.dir/formats/thermoformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/opendxformat.cpp:275:9: warning: 'GetOriginVector' is deprecated: Use GetOriginVector() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 275 | gd->GetOriginVector(origin); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/griddata.h:88:5: note: 'GetOriginVector' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 88 | OB_DEPRECATED_MSG("Use GetOriginVector() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 54%] Building CXX object src/CMakeFiles/openbabel.dir/formats/tinkerformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 54%] Building CXX object src/CMakeFiles/openbabel.dir/formats/unichemformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 54%] Building CXX object src/CMakeFiles/openbabel.dir/formats/viewmolformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 55%] Building CXX object src/CMakeFiles/openbabel.dir/formats/wlnformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 55%] Building CXX object src/CMakeFiles/openbabel.dir/formats/xedformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 55%] Building CXX object src/CMakeFiles/openbabel.dir/formats/xyzformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 56%] Building CXX object src/CMakeFiles/openbabel.dir/formats/yasaraformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 2 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 56%] Building CXX object src/CMakeFiles/openbabel.dir/formats/genbankformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 56%] Building CXX object src/CMakeFiles/openbabel.dir/formats/xtcformat.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 57%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/cansmidescriptor.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 57%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/cmpdfilter.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 57%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/groupcontrib.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 57%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/filters.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 58%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/inchidescriptor.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 58%] Building CXX object src/CMakeFiles/openbabel.dir/descriptors/smartsdescriptors.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 58%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprints/finger2.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/rinchiformat.cpp:147:40: warning: 'GetFirstAtom' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 147 | if (mol.NumAtoms() == 1 && mol.GetFirstAtom()->GetAtomicNum() == 0) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/mol.h:287:5: note: 'GetFirstAtom' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 287 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/rxnformat.cpp:262:25: warning: 'GetFirstAtom' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 262 | OBAtom *atm = pmol->GetFirstAtom(); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/mol.h:287:5: note: 'GetFirstAtom' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 287 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 59%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprints/finger3.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 59%] Building CXX object src/CMakeFiles/openbabel.dir/fingerprints/fingerecfp.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/smileyformat.cpp:158:15: warning: 58 enumeration values not handled in switch: 'NotChiral', 'TH1', 'TH2'... [-Wswitch] Step #6 - "compile-libfuzzer-introspector-x86_64": 158 | switch (chirality) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^~~~~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 59%] Building CXX object src/CMakeFiles/openbabel.dir/forcefields/forcefieldgaff.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 60%] Building CXX object src/CMakeFiles/openbabel.dir/forcefields/forcefieldghemical.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 60%] Building CXX object src/CMakeFiles/openbabel.dir/forcefields/forcefieldmmff94.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 60%] Building CXX object src/CMakeFiles/openbabel.dir/forcefields/forcefielduff.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 61%] Building CXX object src/CMakeFiles/openbabel.dir/ops/addfilename.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/yasaraformat.cpp:571:7: warning: 'snprintf' will always be truncated; specified size is 4, but format string expands to at least 5 [-Wformat-truncation] Step #6 - "compile-libfuzzer-introspector-x86_64": 571 | snprintf(&buffer[12], 4, "%4d",res->GetNum()); } Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 61%] Building CXX object src/CMakeFiles/openbabel.dir/ops/addinindex.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:703:24: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #6 - "compile-libfuzzer-introspector-x86_64": 703 | if (fabs(lf) > MAXABS) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~ ^~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #6 - "compile-libfuzzer-introspector-x86_64": 32 | #define MAXABS INT_MAX-2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~~~~~~^~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:716:24: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #6 - "compile-libfuzzer-introspector-x86_64": 716 | if (fabs(lf) > MAXABS) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~ ^~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #6 - "compile-libfuzzer-introspector-x86_64": 32 | #define MAXABS INT_MAX-2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~~~~~~^~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:729:24: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #6 - "compile-libfuzzer-introspector-x86_64": 729 | if (fabs(lf) > MAXABS) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~ ^~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #6 - "compile-libfuzzer-introspector-x86_64": 32 | #define MAXABS INT_MAX-2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~~~~~~^~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:755:50: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #6 - "compile-libfuzzer-introspector-x86_64": 755 | (float)maxint[2] - (float)minint[2] >= MAXABS) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~ ^~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #6 - "compile-libfuzzer-introspector-x86_64": 32 | #define MAXABS INT_MAX-2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~~~~~~^~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:754:50: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #6 - "compile-libfuzzer-introspector-x86_64": 754 | (float)maxint[1] - (float)minint[1] >= MAXABS || Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~ ^~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #6 - "compile-libfuzzer-introspector-x86_64": 32 | #define MAXABS INT_MAX-2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~~~~~~^~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:753:50: warning: implicit conversion from 'int' to 'float' changes value from 2147483645 to 2147483648 [-Wimplicit-const-int-float-conversion] Step #6 - "compile-libfuzzer-introspector-x86_64": 753 | if ((float)maxint[0] - (float)minint[0] >= MAXABS || Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~ ^~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/formats/xtcformat.cpp:32:23: note: expanded from macro 'MAXABS' Step #6 - "compile-libfuzzer-introspector-x86_64": 32 | #define MAXABS INT_MAX-2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~~~~~~^~ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 61%] Building CXX object src/CMakeFiles/openbabel.dir/ops/addpolarh.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 62%] Building CXX object src/CMakeFiles/openbabel.dir/ops/addnonpolarh.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 62%] Building CXX object src/CMakeFiles/openbabel.dir/ops/canonical.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 62%] Building CXX object src/CMakeFiles/openbabel.dir/ops/changecell.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 63%] Building CXX object src/CMakeFiles/openbabel.dir/ops/delpolarh.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 63%] Building CXX object src/CMakeFiles/openbabel.dir/ops/delnonpolarh.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 63%] Building CXX object src/CMakeFiles/openbabel.dir/ops/gen2D.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 64%] Building CXX object src/CMakeFiles/openbabel.dir/ops/fillUC.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 64%] Building CXX object src/CMakeFiles/openbabel.dir/ops/forcefield.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 64%] Building CXX object src/CMakeFiles/openbabel.dir/ops/gen3d.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": In file included from /src/openbabel/src/descriptors/inchidescriptor.cpp:24: Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/inchiformat.h:148:50: warning: while loop has empty body [-Wempty-body] Step #6 - "compile-libfuzzer-introspector-x86_64": 148 | while(p1!=s1.end() && isdigit(*p1++)); --p1; Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/inchiformat.h:148:50: note: put the semicolon on a separate line to silence this warning Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/inchiformat.h:153:50: warning: while loop has empty body [-Wempty-body] Step #6 - "compile-libfuzzer-introspector-x86_64": 153 | while(p2!=s2.end() && isdigit(*p2++)); --p2; Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/inchiformat.h:153:50: note: put the semicolon on a separate line to silence this warning Step #6 - "compile-libfuzzer-introspector-x86_64": [ 65%] Building CXX object src/CMakeFiles/openbabel.dir/ops/largest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 65%] Building CXX object src/CMakeFiles/openbabel.dir/ops/loader.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 65%] Building CXX object src/CMakeFiles/openbabel.dir/ops/neutralize.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 66%] Building CXX object src/CMakeFiles/openbabel.dir/ops/opsplit.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 66%] Building CXX object src/CMakeFiles/openbabel.dir/ops/optransform.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 66%] Building CXX object src/CMakeFiles/openbabel.dir/ops/partialcharges.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 6 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 67%] Building CXX object src/CMakeFiles/openbabel.dir/ops/readconformers.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 2 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 67%] Building CXX object src/CMakeFiles/openbabel.dir/ops/sort.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 67%] Building CXX object src/CMakeFiles/openbabel.dir/ops/opisomorph.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 68%] Building CXX object src/CMakeFiles/openbabel.dir/ops/ophighlight.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefields/forcefieldgaff.cpp:441:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 441 | if (IsNearZero(rab, 1.0e-3)) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefields/forcefieldghemical.cpp:344:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 344 | if (IsNearZero(rab, 1.0e-3)) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 68%] Building CXX object src/CMakeFiles/openbabel.dir/ops/xout.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 68%] Building CXX object src/CMakeFiles/openbabel.dir/charges/eem.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 69%] Building CXX object src/CMakeFiles/openbabel.dir/charges/gasteiger.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefields/forcefielduff.cpp:269:11: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 269 | if (IsNearZero(dotAbbcBccd) || !isfinite(tor)) { // stop any NaN or infinity Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefields/forcefielduff.cpp:515:27: warning: 'VectorLengthDerivative' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 515 | rab = OBForceField::VectorLengthDerivative(da, db); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/forcefield.h:1523:5: note: 'VectorLengthDerivative' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 1523 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefields/forcefielduff.cpp:519:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 519 | if (IsNearZero(rab, 1.0e-3)) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/forcefields/forcefielduff.cpp:1325:11: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 1325 | if (IsNearZero(torsioncalc.V)) // don't bother calcuating this torsion Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 69%] Building CXX object src/CMakeFiles/openbabel.dir/charges/none.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 69%] Building CXX object src/CMakeFiles/openbabel.dir/charges/mmff94.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 70%] Building CXX object src/CMakeFiles/openbabel.dir/charges/fromfile.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 70%] Building CXX object src/CMakeFiles/openbabel.dir/depict/depict.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 70%] Building CXX object src/CMakeFiles/openbabel.dir/depict/svgpainter.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/ops/gen3d.cpp:169:12: warning: 'UpdateCoordinates' is deprecated: Use GetCooordinates instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 169 | pFF->UpdateCoordinates(molCopy); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/forcefield.h:713:5: note: 'UpdateCoordinates' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 713 | OB_DEPRECATED_MSG("Use GetCooordinates instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/ops/gen3d.cpp:187:10: warning: 'UpdateCoordinates' is deprecated: Use GetCooordinates instead. [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 187 | pFF->UpdateCoordinates(molCopy); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/forcefield.h:713:5: note: 'UpdateCoordinates' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 713 | OB_DEPRECATED_MSG("Use GetCooordinates instead.") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 71%] Building CXX object src/CMakeFiles/openbabel.dir/math/matrix3x3.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 71%] Building CXX object src/CMakeFiles/openbabel.dir/math/spacegroup.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 71%] Building CXX object src/CMakeFiles/openbabel.dir/math/transform3d.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 72%] Building CXX object src/CMakeFiles/openbabel.dir/math/vector3.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 72%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/stereo.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 72%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetranonplanar.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 73%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetraplanar.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 73%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/squareplanar.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 2 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 73%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/cistrans.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 74%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/tetrahedral.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 74%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/perception.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 74%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/facade.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 75%] Building CXX object src/CMakeFiles/openbabel.dir/stereo/gen3dstereohelper.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/math/matrix3x3.cpp:273:19: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | vv.SetX(x()*m.Get(0,0) + y()*m.Get(0,1) + z()*m.Get(0,2)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/math/matrix3x3.cpp:273:36: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | vv.SetX(x()*m.Get(0,0) + y()*m.Get(0,1) + z()*m.Get(0,2)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/math/matrix3x3.cpp:273:53: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 273 | vv.SetX(x()*m.Get(0,0) + y()*m.Get(0,1) + z()*m.Get(0,2)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/math/matrix3x3.cpp:274:19: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 274 | vv.SetY(x()*m.Get(1,0) + y()*m.Get(1,1) + z()*m.Get(1,2)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/math/matrix3x3.cpp:274:36: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 274 | vv.SetY(x()*m.Get(1,0) + y()*m.Get(1,1) + z()*m.Get(1,2)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/math/matrix3x3.cpp:274:53: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 274 | vv.SetY(x()*m.Get(1,0) + y()*m.Get(1,1) + z()*m.Get(1,2)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/math/matrix3x3.cpp:275:19: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 275 | vv.SetZ(x()*m.Get(2,0) + y()*m.Get(2,1) + z()*m.Get(2,2)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/math/matrix3x3.cpp:275:36: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 275 | vv.SetZ(x()*m.Get(2,0) + y()*m.Get(2,1) + z()*m.Get(2,2)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/math/matrix3x3.cpp:275:53: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 275 | vv.SetZ(x()*m.Get(2,0) + y()*m.Get(2,1) + z()*m.Get(2,2)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 9 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/depict/depict.cpp:1237:99: warning: expression does not compute the number of elements in this array; element type is 'const float', not 'double' [-Wsizeof-array-div] Step #6 - "compile-libfuzzer-introspector-x86_64": 1237 | static const vector pat = vector(dashpattern,dashpattern + sizeof(dashpattern)/sizeof(double)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ~~~~~~~~~~~ ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/depict/depict.cpp:1236:24: note: array 'dashpattern' declared here Step #6 - "compile-libfuzzer-introspector-x86_64": 1236 | static const float dashpattern[] = {5., 5.}; Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/depict/depict.cpp:1237:99: note: place parentheses around the 'sizeof(double)' expression to silence this warning Step #6 - "compile-libfuzzer-introspector-x86_64": 1237 | static const vector pat = vector(dashpattern,dashpattern + sizeof(dashpattern)/sizeof(double)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/stereo/perception.cpp:2401:9: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2401 | if (IsNearZero(v1.length(), 1.0e-3) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/src/stereo/perception.cpp:2402:10: warning: 'IsNearZero' is deprecated [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 2402 | || IsNearZero(v2.length(), 1.0e-3)) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:197:3: note: 'IsNearZero' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 197 | OB_DEPRECATED Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:37:29: note: expanded from macro 'OB_DEPRECATED' Step #6 - "compile-libfuzzer-introspector-x86_64": 37 | #define OB_DEPRECATED [[deprecated]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 4 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": 1 warning generated. Step #6 - "compile-libfuzzer-introspector-x86_64": 2 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 75%] Linking CXX static library libopenbabel.a Step #6 - "compile-libfuzzer-introspector-x86_64": [ 75%] Built target openbabel Step #6 - "compile-libfuzzer-introspector-x86_64": [ 76%] Building CXX object tools/CMakeFiles/obabel.dir/obabel.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 76%] Building CXX object test/CMakeFiles/roundtrip.dir/roundtrip.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 76%] Building CXX object test/CMakeFiles/fuzz_obconversion_smiles.dir/fuzz/fuzz_obconversion.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 76%] Building CXX object test/CMakeFiles/fuzz_obconversion_sdf.dir/fuzz/fuzz_obconversion.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 77%] Building CXX object test/CMakeFiles/fuzz_convert.dir/fuzz/fuzz_convert.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 77%] Building CXX object test/CMakeFiles/test_runner.dir/test_runner.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 77%] Building CXX object test/CMakeFiles/test_runner.dir/aliastest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 78%] Building CXX object test/CMakeFiles/test_runner.dir/automorphismtest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 78%] Building CXX object test/CMakeFiles/test_runner.dir/buildertest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 78%] Building CXX object test/CMakeFiles/test_runner.dir/canonconsistenttest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 78%] Building CXX object test/CMakeFiles/test_runner.dir/canonfragmenttest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 79%] Building CXX object test/CMakeFiles/test_runner.dir/canonstabletest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 79%] Building CXX object test/CMakeFiles/test_runner.dir/carspacegrouptest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 79%] Building CXX object test/CMakeFiles/test_runner.dir/cifspacegrouptest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 80%] Building CXX object test/CMakeFiles/test_runner.dir/cistranstest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 80%] Building CXX object test/CMakeFiles/test_runner.dir/conversiontest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 80%] Building CXX object test/CMakeFiles/test_runner.dir/addhtest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 80%] Building CXX object test/CMakeFiles/test_runner.dir/graphsymtest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 81%] Building CXX object test/CMakeFiles/test_runner.dir/gziptest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 81%] Building CXX object test/CMakeFiles/test_runner.dir/implicitHtest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 82%] Building CXX object test/CMakeFiles/test_runner.dir/isomorphismtest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 82%] Building CXX object test/CMakeFiles/test_runner.dir/lssrtest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 82%] Building CXX object test/CMakeFiles/test_runner.dir/multicmltest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 83%] Building CXX object test/CMakeFiles/test_runner.dir/periodictest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 83%] Building CXX object test/CMakeFiles/test_runner.dir/regressionstest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 83%] Building CXX object test/CMakeFiles/test_runner.dir/rotortest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 84%] Building CXX object test/CMakeFiles/test_runner.dir/shuffletest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 84%] Building CXX object test/CMakeFiles/test_runner.dir/smilestest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 84%] Building CXX object test/CMakeFiles/test_runner.dir/spectrophoretest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/squareplanartest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/stereoperceptiontest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 85%] Building CXX object test/CMakeFiles/test_runner.dir/stereotest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 86%] Building CXX object test/CMakeFiles/test_runner.dir/tautomertest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:255:21: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #6 - "compile-libfuzzer-introspector-x86_64": 255 | // / \  Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:270:21: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #6 - "compile-libfuzzer-introspector-x86_64": 270 | // / \  Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:285:16: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #6 - "compile-libfuzzer-introspector-x86_64": 285 | // \  Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:287:21: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #6 - "compile-libfuzzer-introspector-x86_64": 287 | // \  Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:310:21: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #6 - "compile-libfuzzer-introspector-x86_64": 310 | // \  Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/stereoperceptiontest.cpp:432:10: warning: backslash and newline separated by space [-Wbackslash-newline-escape] Step #6 - "compile-libfuzzer-introspector-x86_64": 432 | // \  Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/rotortest.cpp:96:13: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 96 | OB_ASSERT(IsNear(RAD_TO_DEG * rotor.CalcTorsion(mol->GetCoordinates()), 60.0, 1.0)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/stereotest.cpp:102:13: warning: 5 enumeration values not handled in switch: 'ExtendedCisTrans', 'SquarePlanar', 'ExtendedTetrahedral'... [-Wswitch] Step #6 - "compile-libfuzzer-introspector-x86_64": 102 | switch (units.at(i).type) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^~~~~~~~~~~~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/rotortest.cpp:134:13: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 134 | OB_ASSERT(IsNear(RAD_TO_DEG * rotor.CalcTorsion(mol->GetCoordinates()), 0.0, 1.0)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/stereotest.cpp:132:13: warning: 5 enumeration values not handled in switch: 'ExtendedCisTrans', 'SquarePlanar', 'ExtendedTetrahedral'... [-Wswitch] Step #6 - "compile-libfuzzer-introspector-x86_64": 132 | switch (units.at(i).type) { Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^~~~~~~~~~~~~~~~ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/rotortest.cpp:140:13: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 140 | OB_ASSERT(IsNear(RAD_TO_DEG * rotor.CalcTorsion(mol->GetCoordinates()), 0.0, 1.0));  Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": [ 87%] Linking CXX executable ../bin/fuzz_obconversion_sdf Step #6 - "compile-libfuzzer-introspector-x86_64": [ 87%] Linking CXX executable ../bin/fuzz_obconversion_smiles Step #6 - "compile-libfuzzer-introspector-x86_64": [ 87%] Building CXX object test/CMakeFiles/test_runner.dir/tetrahedraltest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 87%] Building CXX object test/CMakeFiles/test_runner.dir/tetranonplanartest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/tetraplanartest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 88%] Linking CXX executable ../bin/obabel Step #6 - "compile-libfuzzer-introspector-x86_64": [ 88%] Building CXX object test/CMakeFiles/test_runner.dir/uniqueidtest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 89%] Linking CXX executable ../bin/roundtrip Step #6 - "compile-libfuzzer-introspector-x86_64": [ 89%] Linking CXX executable ../bin/fuzz_convert Step #6 - "compile-libfuzzer-introspector-x86_64": [ 89%] Building CXX object test/CMakeFiles/test_runner.dir/aromatest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/atom.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/bond.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 90%] Building CXX object test/CMakeFiles/test_runner.dir/cansmi.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/charge_mmff94.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/charge_gasteiger.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 91%] Building CXX object test/CMakeFiles/test_runner.dir/conversion.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/datatest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 6 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/ffgaff.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 92%] Building CXX object test/CMakeFiles/test_runner.dir/ffghemical.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/ffmmff94.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/ffuff.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 93%] Building CXX object test/CMakeFiles/test_runner.dir/formalcharge.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/format.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/formula.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 94%] Building CXX object test/CMakeFiles/test_runner.dir/internalcoord.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 3 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmarts.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/invalidsmiles.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 95%] Building CXX object test/CMakeFiles/test_runner.dir/iterators.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/logp_psa.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": 2 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/mol.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 96%] Building CXX object test/CMakeFiles/test_runner.dir/math.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/pdbreadfile.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/phmodel.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 97%] Building CXX object test/CMakeFiles/test_runner.dir/residue.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/ringtest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/smartstest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 98%] Building CXX object test/CMakeFiles/test_runner.dir/smartsparse.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/smilesmatch.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/unitcell.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [ 99%] Building CXX object test/CMakeFiles/test_runner.dir/obtest.cpp.o Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:190:14: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 190 | x = m2.Get( i, j ); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:201:10: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 201 | m3.Set(i,j, m2(i,j) ); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:325:16: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 325 | Diagonal.Set(i, j, 0.0); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:326:12: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 326 | Diagonal.Set(0, 0, randomizer.NextFloat()); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:327:12: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 327 | Diagonal.Set(1, 1, Diagonal.Get(0,0)+fabs(randomizer.NextFloat())); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:327:31: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 327 | Diagonal.Set(1, 1, Diagonal.Get(0,0)+fabs(randomizer.NextFloat())); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:328:12: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 328 | Diagonal.Set(2, 2, Diagonal.Get(1,1)+fabs(randomizer.NextFloat())); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:328:31: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 328 | Diagonal.Set(2, 2, Diagonal.Get(1,1)+fabs(randomizer.NextFloat())); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:346:51: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 346 | VERIFY( IsNegligible( eigenvals[j] - Diagonal.Get(j,j), Diagonal.Get(2,2) ) ); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:346:70: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 346 | VERIFY( IsNegligible( eigenvals[j] - Diagonal.Get(j,j), Diagonal.Get(2,2) ) ); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:360:7: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 360 | rnd.Set(0,1, rnd.Get(1,0)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:360:20: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 360 | rnd.Set(0,1, rnd.Get(1,0)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:361:7: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 361 | rnd.Set(0,2, rnd.Get(2,0)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:361:20: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 361 | rnd.Set(0,2, rnd.Get(2,0)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:362:7: warning: 'Set' is deprecated: use the non-constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 362 | rnd.Set(1,2, rnd.Get(2,1)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:188:7: note: 'Set' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 188 | OB_DEPRECATED_MSG("use the non-constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:362:20: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 362 | rnd.Set(1,2, rnd.Get(2,1)); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/math.cpp:376:39: warning: 'Get' is deprecated: use the constant operator() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 376 | VERIFY( compare( shouldBeDiagonal.Get(j,j), eigenvals[j] ) ); Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/math/matrix3x3.h:171:7: note: 'Get' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 171 | OB_DEPRECATED_MSG("use the constant operator() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/logp_psa.cpp:78:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 78 | if (IsNear(logP , 1.4008)) { // value from JOELib2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/logp_psa.cpp:85:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 85 | if (IsNear(psa , 29.46)) { // value from JOELib2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/logp_psa.cpp:95:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 95 | if (IsNear(logP, 2.5815)) { // Value from JOELib2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/logp_psa.cpp:102:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 102 | if (IsNear(psa, 0.0)) { // Value from JOELib2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/logp_psa.cpp:112:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 112 | if (IsNear(logP, 2.0264)) { // JOELib2 = 1.9534, more H added on N Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/logp_psa.cpp:119:7: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 119 | if (IsNear(psa, 29.1)) { // Value from JOELib2 Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 17 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": 6 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:125:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 125 | if ( IsNear(a, atof(vs[0].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:129:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 129 | if ( IsNear(b, atof(vs[1].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:133:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 133 | if ( IsNear(c, atof(vs[2].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:138:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 138 | if ( IsNear(alpha, atof(vs[3].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:142:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 142 | if ( IsNear(beta, atof(vs[4].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:146:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 146 | if ( IsNear(gamma, atof(vs[5].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:155:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 155 | if ( IsNear(a, cell2.GetA(), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:159:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 159 | if ( IsNear(b, cell2.GetB(), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:163:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 163 | if ( IsNear(c, cell2.GetC(), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:168:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 168 | if ( IsNear(alpha, cell2.GetAlpha(), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:172:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 172 | if ( IsNear(beta, cell2.GetBeta(), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:176:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 176 | if ( IsNear(gamma, cell2.GetGamma(), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:208:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 208 | if ( IsNear(tmpcoords[0], atof(vs[0].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:212:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 212 | if ( IsNear(tmpcoords[1], atof(vs[1].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:216:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 216 | if ( IsNear(tmpcoords[2], atof(vs[2].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:232:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 232 | if ( IsNear(tmpcoords[0], atof(vs[0].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:236:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 236 | if ( IsNear(tmpcoords[1], atof(vs[1].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:240:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 240 | if ( IsNear(tmpcoords[2], atof(vs[2].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:256:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 256 | if ( IsNear(tmpcoords[0], atof(vs[0].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:260:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 260 | if ( IsNear(tmpcoords[1], atof(vs[1].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:264:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 264 | if ( IsNear(tmpcoords[2], atof(vs[2].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:280:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 280 | if ( IsNear(tmpcoords[0], atof(vs[0].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:284:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 284 | if ( IsNear(tmpcoords[1], atof(vs[1].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/test/unitcell.cpp:288:10: warning: 'IsNear' is deprecated: Use IsApprox() instead [-Wdeprecated-declarations] Step #6 - "compile-libfuzzer-introspector-x86_64": 288 | if ( IsNear(tmpcoords[2], atof(vs[2].c_str()), 1.0e-3) ) Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/include/openbabel/obutil.h:189:3: note: 'IsNear' has been explicitly marked deprecated here Step #6 - "compile-libfuzzer-introspector-x86_64": 189 | OB_DEPRECATED_MSG("Use IsApprox() instead") Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": /src/openbabel/build/include/openbabel/babelconfig.h:38:38: note: expanded from macro 'OB_DEPRECATED_MSG' Step #6 - "compile-libfuzzer-introspector-x86_64": 38 | #define OB_DEPRECATED_MSG(msg) [[deprecated(msg)]] Step #6 - "compile-libfuzzer-introspector-x86_64": |  ^ Step #6 - "compile-libfuzzer-introspector-x86_64": 24 warnings generated. Step #6 - "compile-libfuzzer-introspector-x86_64": [100%] Linking CXX executable ../bin/test_runner Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Fuzz introspector is running Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 2] : 10:08:27 : Using default configuration Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Running introspector on ld-temp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Main function filename: /src/openbabel/tools/obabel.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Main function is non-empty Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : This means a main function is in the source code rather in the libfuzzer library, and thus we do not care about it. We only want to study the actual fuzzers. Exiting this run. Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Forcing analysis of all functions. This in auto-fuzz mode[Log level 1] : 10:08:27 : Logging next yaml tile to /src/allFunctionsWithMain-22-fa37JncCHr.yaml Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Fuzz introspector is running Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 2] : 10:08:27 : Using default configuration Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Running introspector on ld-temp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : This is a fuzzer, performing analysis Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Logging next yaml tile to /src/fuzzerLogFile-0-SJmEFrxq4l.data.yaml Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Fuzz introspector is running Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 2] : 10:08:27 : Using default configuration Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Running introspector on ld-temp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : This is a fuzzer, performing analysis Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Logging next yaml tile to /src/fuzzerLogFile-0-vjQgmlAiKK.data.yaml Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Fuzz introspector is running Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 2] : 10:08:27 : Using default configuration Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Running introspector on ld-temp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Main function filename: /src/openbabel/test/roundtrip.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Main function is non-empty Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : This means a main function is in the source code rather in the libfuzzer library, and thus we do not care about it. We only want to study the actual fuzzers. Exiting this run. Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Forcing analysis of all functions. This in auto-fuzz mode[Log level 1] : 10:08:27 : Logging next yaml tile to /src/allFunctionsWithMain-22-fa37JncCHr.yaml Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Fuzz introspector is running Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 2] : 10:08:27 : Using default configuration Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Running introspector on ld-temp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : This is a fuzzer, performing analysis Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Logging next yaml tile to /src/fuzzerLogFile-0-VsiTpjpDXV.data.yaml Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:27 : Wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:32 : Fuzz introspector is running Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 2] : 10:08:32 : Using default configuration Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:32 : Running introspector on ld-temp.o Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:32 : Main function filename: /src/openbabel/build/test/test_runner.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:32 : Main function is non-empty Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:32 : This means a main function is in the source code rather in the libfuzzer library, and thus we do not care about it. We only want to study the actual fuzzers. Exiting this run. Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:32 : Forcing analysis of all functions. This in auto-fuzz mode[Log level 1] : 10:08:32 : Logging next yaml tile to /src/allFunctionsWithMain-22-fa37JncCHr.yaml Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:32 : Wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:41 : Ended wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:41 : Ended wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:41 : Ended wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:41 : Ended wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:41 : Ended wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:43 : Finished introspector module Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:43 : Finished introspector module Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:43 : Finished introspector module Step #6 - "compile-libfuzzer-introspector-x86_64": [Log level 1] : 10:08:47 : Ended wrapping all functions Step #6 - "compile-libfuzzer-introspector-x86_64": [100%] Built target obabel Step #6 - "compile-libfuzzer-introspector-x86_64": [100%] Built target fuzz_obconversion_sdf Step #6 - "compile-libfuzzer-introspector-x86_64": [100%] Built target roundtrip Step #6 - "compile-libfuzzer-introspector-x86_64": [100%] Built target fuzz_obconversion_smiles Step #6 - "compile-libfuzzer-introspector-x86_64": [100%] Built target fuzz_convert Step #6 - "compile-libfuzzer-introspector-x86_64": [100%] Built target test_runner Step #6 - "compile-libfuzzer-introspector-x86_64": + cp bin/fuzz_convert bin/fuzz_obconversion_sdf bin/fuzz_obconversion_smiles /workspace/out/libfuzzer-introspector-x86_64/ Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data' and '/src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data' and '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data' and '/src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.yaml' and '/src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.yaml' and '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.yaml' and '/src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_info' and '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_info' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.debug_all_functions' and '/src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.debug_all_functions' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.debug_all_types' and '/src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.debug_all_types' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_all_types' and '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_all_types' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.debug_info' and '/src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.debug_info' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_all_functions' and '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_all_functions' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.debug_all_globals' and '/src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.debug_all_globals' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.debug_info' and '/src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.debug_info' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_all_globals' and '/src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_all_globals' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-11-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-11-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-15-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-15-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-21-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-21-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-14-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-14-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-0-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-0-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-1-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-1-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-20-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-20-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-10-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-10-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-12-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-12-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-6-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-6-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-7-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-7-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-17-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-17-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-8-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-8-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-3-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-3-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": cp: '/src/inspector/allFunctionsWithMain-5-fa37JncCHr.yaml' and '/src/inspector/allFunctionsWithMain-5-fa37JncCHr.yaml' are the same file Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:14.285 INFO main - main: Running fuzz introspector post-processing Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:14.286 INFO utils - scan_executables_for_fuzz_introspector_logs: File: /workspace/out/libfuzzer-introspector-x86_64/fuzz_obconversion_sdf is executable Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:14.286 INFO utils - scan_executables_for_fuzz_introspector_logs: File: /workspace/out/libfuzzer-introspector-x86_64/fuzz_obconversion_smiles is executable Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:14.286 INFO utils - scan_executables_for_fuzz_introspector_logs: File: /workspace/out/libfuzzer-introspector-x86_64/fuzz_convert is executable Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:14.286 INFO utils - scan_executables_for_fuzz_introspector_logs: File: /workspace/out/libfuzzer-introspector-x86_64/llvm-symbolizer is executable Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:14.510 INFO utils - scan_executables_for_fuzz_introspector_logs: Found match fuzzerLogFile-0-SJmEFrxq4l Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:14.732 INFO utils - scan_executables_for_fuzz_introspector_logs: Found match fuzzerLogFile-0-vjQgmlAiKK Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:14.954 INFO utils - scan_executables_for_fuzz_introspector_logs: Found match fuzzerLogFile-0-VsiTpjpDXV Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.066 INFO commands - correlate_binaries_to_logs: Pairings: [{'executable_path': '/workspace/out/libfuzzer-introspector-x86_64/fuzz_obconversion_sdf', 'fuzzer_log_file': 'fuzzerLogFile-0-SJmEFrxq4l'}, {'executable_path': '/workspace/out/libfuzzer-introspector-x86_64/fuzz_obconversion_smiles', 'fuzzer_log_file': 'fuzzerLogFile-0-vjQgmlAiKK'}, {'executable_path': '/workspace/out/libfuzzer-introspector-x86_64/fuzz_convert', 'fuzzer_log_file': 'fuzzerLogFile-0-VsiTpjpDXV'}] Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.067 INFO main - main: Ending fuzz introspector post-processing Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.237 INFO main - main: Running fuzz introspector post-processing Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.243 INFO data_loader - load_all_profiles: [] Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.243 INFO data_loader - load_all_profiles: - found 3 profiles to load Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.264 INFO data_loader - read_fuzzer_data_file_to_profile: - loading /src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.265 INFO data_loader - read_fuzzer_data_file_to_profile: target data f: /src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.265 INFO utils - data_file_read_yaml: Set base loader to use CSafeLoader Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.266 INFO data_loader - read_fuzzer_data_file_to_profile: - loading /src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.267 INFO data_loader - read_fuzzer_data_file_to_profile: target data f: /src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.267 INFO utils - data_file_read_yaml: Set base loader to use CSafeLoader Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.267 INFO data_loader - read_fuzzer_data_file_to_profile: - loading /src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.267 INFO data_loader - read_fuzzer_data_file_to_profile: target data f: /src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:15.267 INFO utils - data_file_read_yaml: Set base loader to use CSafeLoader Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:49.816 INFO utils - data_file_read_yaml: Loaded single yaml module Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:50.174 INFO utils - data_file_read_yaml: Loaded single yaml module Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:50.467 INFO utils - data_file_read_yaml: Loaded single yaml module Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:50.470 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:51.225 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:51.529 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:51.785 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:51.991 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:52.092 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:52.212 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:52.748 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:53.303 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:53.432 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:53.524 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:53.638 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:53.861 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:54.058 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:54.402 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:54.742 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:55.101 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:55.604 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:55.626 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:55.701 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.25 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:56.069 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:56.221 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:56.910 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:56.932 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:57.007 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.25 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:57.295 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:57.317 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:57.379 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:57.392 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.25 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:57.540 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:57.545 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:57.766 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:57.926 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:58.346 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.10 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:58.388 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.6 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:58.853 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:58.874 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:59.258 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:59.483 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:59.656 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.10 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:10:59.698 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.6 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.071 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.10 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.113 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.6 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.183 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.214 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.214 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.215 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.5 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.217 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.5 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.223 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.223 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.7 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.234 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.253 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.253 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.253 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.5 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.253 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.7 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.253 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.9 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.609 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:00.797 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.003 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.231 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.534 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.534 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.535 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.5 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.536 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.5 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.543 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.543 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.7 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.554 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.571 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.572 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.572 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.5 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.572 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.7 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.572 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.9 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.971 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.971 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.971 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.5 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.973 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.5 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.979 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.979 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.7 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:01.991 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:02.008 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:02.008 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:02.008 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.5 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:02.008 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.7 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:02.009 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.9 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:02.328 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:02.762 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:03.344 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.8 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:03.384 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.2 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:04.677 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.8 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:04.716 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.2 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:04.781 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:04.782 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.2 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:04.782 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:05.118 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.8 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:05.157 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.2 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:05.502 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:06.156 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:06.156 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.2 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:06.157 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:06.612 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:06.613 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.2 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:06.613 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:06.875 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:07.340 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:08.561 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:08.618 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:08.698 INFO data_loader - read_fuzzer_data_file_to_profile: Returning profile Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:08.838 INFO data_loader - _load_profile: profile is none Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:09.051 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:09.075 INFO data_loader - read_fuzzer_data_file_to_profile: Returning profile Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:09.216 INFO data_loader - _load_profile: profile is none Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:09.559 INFO fuzzer_profile - _set_function_list: May have non-normalised function: __cxx_global_var_init.1 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:09.583 INFO data_loader - read_fuzzer_data_file_to_profile: Returning profile Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:09.729 INFO data_loader - _load_profile: profile is none Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.827 INFO analysis - load_data_files: Found 3 profiles Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.827 INFO utils - data_file_read_yaml: Set base loader to use CSafeLoader Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.828 INFO utils - data_file_read_yaml: Loaded single yaml module Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.828 INFO fuzzer_profile - correlate_executable_name: Correlated fuzzerLogFile-0-VsiTpjpDXV.data with fuzzerLogFile-0-VsiTpjpDXV.data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.828 INFO fuzzer_profile - correlate_executable_name: Correlated fuzzerLogFile-0-SJmEFrxq4l.data with fuzzerLogFile-0-SJmEFrxq4l.data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.828 INFO fuzzer_profile - correlate_executable_name: Correlated fuzzerLogFile-0-vjQgmlAiKK.data with fuzzerLogFile-0-vjQgmlAiKK.data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.828 INFO analysis - load_data_files: [+] Accummulating profiles Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.828 INFO analysis - load_data_files: Accummulating using multiprocessing Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.890 INFO fuzzer_profile - accummulate_profile: fuzz_convert: propagating functions reached Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.915 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_sdf: propagating functions reached Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:24.941 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_smiles: propagating functions reached Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.101 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_sdf: setting reached funcs Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.102 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_sdf: setting unreached funcs Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.110 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_sdf: loading coverage Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.110 INFO fuzzer_profile - _load_coverage: Loading coverage of type c-cpp Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.110 INFO code_coverage - load_llvm_coverage: Loading LLVM coverage for target fuzz_obconversion_sdf Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.113 INFO code_coverage - load_llvm_coverage: Found 3 coverage reports Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.113 INFO code_coverage - load_llvm_coverage: Using the following coverages ['/src/inspector/fuzz_obconversion_sdf.covreport'] Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.113 INFO code_coverage - load_llvm_coverage: Reading coverage report: /src/inspector/fuzz_obconversion_sdf.covreport Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.150 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_smiles: setting reached funcs Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.150 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_smiles: setting unreached funcs Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.159 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_smiles: loading coverage Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.159 INFO fuzzer_profile - _load_coverage: Loading coverage of type c-cpp Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.160 INFO code_coverage - load_llvm_coverage: Loading LLVM coverage for target fuzz_obconversion_smiles Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.163 INFO code_coverage - load_llvm_coverage: Found 3 coverage reports Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.163 INFO code_coverage - load_llvm_coverage: Using the following coverages ['/src/inspector/fuzz_obconversion_smiles.covreport'] Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.163 INFO code_coverage - load_llvm_coverage: Reading coverage report: /src/inspector/fuzz_obconversion_smiles.covreport Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.260 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_smiles: setting file targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.261 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_smiles: setting total basic blocks Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.261 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_smiles: setting cyclomatic complexity Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.261 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_smiles: setting fd cache Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.273 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_smiles: finished accummulating profile Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.280 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_sdf: setting file targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.281 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_sdf: setting total basic blocks Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.281 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_sdf: setting cyclomatic complexity Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.281 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_sdf: setting fd cache Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.293 INFO fuzzer_profile - accummulate_profile: fuzz_obconversion_sdf: finished accummulating profile Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.465 INFO fuzzer_profile - accummulate_profile: fuzz_convert: setting reached funcs Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.466 INFO fuzzer_profile - accummulate_profile: fuzz_convert: setting unreached funcs Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.475 INFO fuzzer_profile - accummulate_profile: fuzz_convert: loading coverage Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.475 INFO fuzzer_profile - _load_coverage: Loading coverage of type c-cpp Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.475 INFO code_coverage - load_llvm_coverage: Loading LLVM coverage for target fuzz_convert Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.478 INFO code_coverage - load_llvm_coverage: Found 3 coverage reports Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.478 INFO code_coverage - load_llvm_coverage: Using the following coverages ['/src/inspector/fuzz_convert.covreport'] Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.478 INFO code_coverage - load_llvm_coverage: Reading coverage report: /src/inspector/fuzz_convert.covreport Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.562 INFO code_coverage - load_llvm_coverage: found case outside a switch?! Step #6 - "compile-libfuzzer-introspector-x86_64": 164| | In the simple case: Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.650 INFO code_coverage - load_llvm_coverage: found case outside a switch?! Step #6 - "compile-libfuzzer-introspector-x86_64": 690| | //There should be three cases: Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.810 INFO fuzzer_profile - accummulate_profile: fuzz_convert: setting file targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.811 INFO fuzzer_profile - accummulate_profile: fuzz_convert: setting total basic blocks Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.811 INFO fuzzer_profile - accummulate_profile: fuzz_convert: setting cyclomatic complexity Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.811 INFO fuzzer_profile - accummulate_profile: fuzz_convert: setting fd cache Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:25.823 INFO fuzzer_profile - accummulate_profile: fuzz_convert: finished accummulating profile Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.264 INFO analysis - load_data_files: [+] Creating project profile Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.266 INFO project_profile - __init__: Creating merged profile of 3 profiles Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.266 INFO project_profile - __init__: Populating functions reached Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.266 INFO project_profile - __init__: Populating functions unreached Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.270 INFO project_profile - __init__: Creating all_functions dictionary Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.357 INFO project_profile - __init__: Gathering complexity and incoming references of each function Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.716 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:15:22, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.716 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:16:23, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.717 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:17:24, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.717 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:18:26, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.717 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:19:27, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.717 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:20:28, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.717 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:23:29, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.717 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:24:31, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.717 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:25:32, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.717 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:26:34, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.717 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:27:35, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.717 INFO project_profile - __init__: Line numbers are different in the same function: LLVMFuzzerTestOneInput:28:36, ignoring Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.744 INFO project_profile - __init__: Completed creationg of merged profile Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:46.744 INFO analysis - load_data_files: [+] Refining profiles Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:47.064 INFO utils - get_target_coverage_url: Extracting coverage for https://storage.googleapis.com/oss-fuzz-coverage/openbabel/reports/20250117/linux -- fuzz_obconversion_smiles Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:47.064 INFO analysis - overlay_calltree_with_coverage: Using coverage url: https://storage.googleapis.com/oss-fuzz-coverage/openbabel/reports-by-target/20250117/fuzz_obconversion_smiles/linux Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:47.083 INFO analysis - overlay_calltree_with_coverage: Overlaying 2 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:47.084 INFO analysis - overlay_calltree_with_coverage: Overlaying 3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:11:47.084 INFO analysis - overlay_calltree_with_coverage: Updating branch complexities Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:16:03.336 INFO analysis - overlay_calltree_with_coverage: [+] found 39 branch blockers. Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:16:03.339 INFO utils - get_target_coverage_url: Extracting coverage for https://storage.googleapis.com/oss-fuzz-coverage/openbabel/reports/20250117/linux -- fuzz_obconversion_sdf Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:16:03.339 INFO analysis - overlay_calltree_with_coverage: Using coverage url: https://storage.googleapis.com/oss-fuzz-coverage/openbabel/reports-by-target/20250117/fuzz_obconversion_sdf/linux Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:16:03.362 INFO analysis - overlay_calltree_with_coverage: Overlaying 2 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:16:03.362 INFO analysis - overlay_calltree_with_coverage: Overlaying 3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:16:03.363 INFO analysis - overlay_calltree_with_coverage: Updating branch complexities Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:19:02.533 INFO analysis - overlay_calltree_with_coverage: [+] found 190 branch blockers. Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:19:02.539 INFO utils - get_target_coverage_url: Extracting coverage for https://storage.googleapis.com/oss-fuzz-coverage/openbabel/reports/20250117/linux -- fuzz_convert Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:19:02.539 INFO analysis - overlay_calltree_with_coverage: Using coverage url: https://storage.googleapis.com/oss-fuzz-coverage/openbabel/reports-by-target/20250117/fuzz_convert/linux Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:19:02.574 INFO analysis - overlay_calltree_with_coverage: Overlaying 2 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:19:02.574 INFO analysis - overlay_calltree_with_coverage: Overlaying 3 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:19:02.575 INFO analysis - overlay_calltree_with_coverage: Updating branch complexities Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:21:54.987 INFO analysis - overlay_calltree_with_coverage: [+] found 592 branch blockers. Step #6 - "compile-libfuzzer-introspector-x86_64": debug info file: %s /src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_info Step #6 - "compile-libfuzzer-introspector-x86_64": debug info file: %s /src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.debug_info Step #6 - "compile-libfuzzer-introspector-x86_64": debug info file: %s /src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.debug_info Step #6 - "compile-libfuzzer-introspector-x86_64": debug info file: %s /src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.debug_all_types Step #6 - "compile-libfuzzer-introspector-x86_64": debug info file: %s /src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_all_types Step #6 - "compile-libfuzzer-introspector-x86_64": debug info file: %s /src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.debug_all_types Step #6 - "compile-libfuzzer-introspector-x86_64": debug info file: %s /src/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.debug_all_functions Step #6 - "compile-libfuzzer-introspector-x86_64": debug info file: %s /src/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_all_functions Step #6 - "compile-libfuzzer-introspector-x86_64": debug info file: %s /src/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.debug_all_functions Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:21:55.721 INFO commands - run_analysis_on_dir: Analyses to run: ['OptimalTargets', 'RuntimeCoverageAnalysis', 'FuzzEngineInputAnalysis', 'FilePathAnalyser', 'MetadataAnalysis', 'AnnotatedCFG'] Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:21:55.721 INFO commands - run_analysis_on_dir: [+] Creating HTML report Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:21:55.722 INFO html_report - create_html_report: - Creating HTML report Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:21:55.722 INFO html_report - create_section_project_overview: - Creating reachability overview table Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:21:57.707 INFO html_report - create_section_fuzzers_overview: - Creating table with overview of all fuzzers Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:21:57.708 INFO html_report - create_section_all_functions: - Creating table with information about all functions in target Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.652 INFO html_report - create_all_function_table: Assembled a total of 4519 entries Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.652 INFO html_report - create_section_fuzzer_detailed_section: - Creating section with details about each fuzzer Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.681 INFO calltree_analysis - __init__: Creating FuzzCalltreeAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.681 INFO calltree_analysis - create_calltree: In calltree Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.684 INFO calltree_analysis - create_calltree: At end Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.684 INFO calltree_analysis - create_calltree: calltree_html_section_string: : 166 -- : 166 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.684 INFO calltree_analysis - create_calltree: Calltree created Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.684 INFO calltree_analysis - create_branch_blocker_table: Creating branch blocker table Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:01.685 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:02.847 INFO font_manager - _load_fontmanager: generated new fontManager Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.155 INFO html_helpers - create_horisontal_calltree_image: Creating image fuzz_obconversion_smiles_colormap.png Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.155 INFO html_helpers - create_horisontal_calltree_image: - extracted the callsites (124 nodes) Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.225 INFO html_helpers - create_horisontal_calltree_image: - iterated over color list Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.226 INFO html_helpers - create_horisontal_calltree_image: - saving image Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.328 INFO html_helpers - create_horisontal_calltree_image: - image saved Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.328 INFO calltree_analysis - create_branch_blocker_table: Creating branch blocker table Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.328 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.329 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.342 INFO calltree_analysis - __init__: Creating FuzzCalltreeAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.343 INFO calltree_analysis - create_calltree: In calltree Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.345 INFO calltree_analysis - create_calltree: At end Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.345 INFO calltree_analysis - create_calltree: calltree_html_section_string: : 166 -- : 166 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.345 INFO calltree_analysis - create_calltree: Calltree created Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.345 INFO calltree_analysis - create_branch_blocker_table: Creating branch blocker table Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.345 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.346 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.432 INFO html_helpers - create_horisontal_calltree_image: Creating image fuzz_obconversion_sdf_colormap.png Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.432 INFO html_helpers - create_horisontal_calltree_image: - extracted the callsites (124 nodes) Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.480 INFO html_helpers - create_horisontal_calltree_image: - iterated over color list Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.480 INFO html_helpers - create_horisontal_calltree_image: - saving image Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.555 INFO html_helpers - create_horisontal_calltree_image: - image saved Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.555 INFO calltree_analysis - create_branch_blocker_table: Creating branch blocker table Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.556 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.575 INFO calltree_analysis - __init__: Creating FuzzCalltreeAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.575 INFO calltree_analysis - create_calltree: In calltree Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.577 INFO calltree_analysis - create_calltree: At end Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.577 INFO calltree_analysis - create_calltree: calltree_html_section_string: : 188 -- : 188 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.578 INFO calltree_analysis - create_calltree: Calltree created Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.578 INFO calltree_analysis - create_branch_blocker_table: Creating branch blocker table Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.578 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.578 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.578 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.578 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.578 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.578 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.579 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.579 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.579 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.579 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.579 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.579 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.707 INFO html_helpers - create_horisontal_calltree_image: Creating image fuzz_convert_colormap.png Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.708 INFO html_helpers - create_horisontal_calltree_image: - extracted the callsites (144 nodes) Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.764 INFO html_helpers - create_horisontal_calltree_image: - iterated over color list Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.764 INFO html_helpers - create_horisontal_calltree_image: - saving image Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.852 INFO html_helpers - create_horisontal_calltree_image: - image saved Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.852 INFO calltree_analysis - create_branch_blocker_table: Creating branch blocker table Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.852 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.852 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.852 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.852 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.852 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.853 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.853 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.853 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.853 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.853 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.853 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.853 ERROR calltree_analysis - create_branch_blocker_table: The calltree index is not valid! Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.881 INFO html_report - create_section_optional_analyses: - Handling optional analyses Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.881 INFO optimal_targets - analysis_func: - Running analysis OptimalTargets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:03.881 INFO optimal_targets - iteratively_get_optimal_targets: - in iteratively_get_optimal_targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:18.616 INFO optimal_targets - analysis_get_optimal_targets: - in analysis_get_optimal_targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:18.623 INFO optimal_targets - iteratively_get_optimal_targets: Getting 7 optimal targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:18.623 INFO optimal_targets - iteratively_get_optimal_targets: - sorting by unreached complexity. Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:18.624 INFO optimal_targets - add_func_to_reached_and_clone: Creating a deepcopy Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:33.943 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:33.948 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount-related data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:34.408 INFO optimal_targets - analysis_get_optimal_targets: - in analysis_get_optimal_targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:34.415 INFO optimal_targets - iteratively_get_optimal_targets: - sorting by unreached complexity. Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:34.416 INFO optimal_targets - add_func_to_reached_and_clone: Creating a deepcopy Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:49.725 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:49.730 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount-related data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:50.153 INFO optimal_targets - analysis_get_optimal_targets: - in analysis_get_optimal_targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:50.202 INFO optimal_targets - iteratively_get_optimal_targets: - sorting by unreached complexity. Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:22:50.204 INFO optimal_targets - add_func_to_reached_and_clone: Creating a deepcopy Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:05.900 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:05.905 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount-related data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:06.345 INFO optimal_targets - analysis_get_optimal_targets: - in analysis_get_optimal_targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:06.396 INFO optimal_targets - iteratively_get_optimal_targets: - sorting by unreached complexity. Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:06.398 INFO optimal_targets - add_func_to_reached_and_clone: Creating a deepcopy Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:20.059 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:20.065 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount-related data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:20.513 INFO optimal_targets - analysis_get_optimal_targets: - in analysis_get_optimal_targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:20.561 INFO optimal_targets - iteratively_get_optimal_targets: - sorting by unreached complexity. Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:20.563 INFO optimal_targets - add_func_to_reached_and_clone: Creating a deepcopy Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:36.317 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:36.324 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount-related data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:36.777 INFO optimal_targets - analysis_get_optimal_targets: - in analysis_get_optimal_targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:36.826 INFO optimal_targets - iteratively_get_optimal_targets: - sorting by unreached complexity. Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:36.827 INFO optimal_targets - add_func_to_reached_and_clone: Creating a deepcopy Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:52.229 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:52.234 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount-related data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:52.685 INFO optimal_targets - analysis_get_optimal_targets: - in analysis_get_optimal_targets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:52.732 INFO optimal_targets - iteratively_get_optimal_targets: - sorting by unreached complexity. Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:23:52.733 INFO optimal_targets - add_func_to_reached_and_clone: Creating a deepcopy Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:08.891 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:08.896 INFO optimal_targets - add_func_to_reached_and_clone: Updating hitcount-related data Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:09.347 INFO optimal_targets - iteratively_get_optimal_targets: Found the following optimal functions: { ['OpenBabel::MDLFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)', 'OpenBabel::GAMESSOutputFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)', 'OpenBabel::MCDLFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)', 'OpenBabel::CIFFormat::ReadMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)', 'OpenBabel::OpGen3D::Do(OpenBabel::OBBase*, char const*, std::__1::map, std::__1::allocator >, std::__1::basic_string, std::__1::allocator >, std::__1::less, std::__1::allocator > >, std::__1::allocator, std::__1::allocator > const, std::__1::basic_string, std::__1::allocator > > > > const*, OpenBabel::OBConversion*)', 'OpenBabel::MCDLFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)', 'OpenBabel::SVGFormat::WriteChemObject(OpenBabel::OBConversion*)'] } Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.363 INFO html_report - create_all_function_table: Assembled a total of 4519 entries Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.444 INFO optimal_targets - analysis_func: - Completed analysis OptimalTargets Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.666 INFO engine_input - analysis_func: - Running analysis FuzzEngineInputAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.666 INFO engine_input - analysis_func: Generating input for fuzz_obconversion_smiles Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO calltree_analysis - __init__: Creating FuzzCalltreeAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversionC2EPNSt3__113basic_istreamIcNS1_11char_traitsIcEEEEPNS1_13basic_ostreamIcS4_EE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversionC2EPNSt3__113basic_istreamIcNS1_11char_traitsIcEEEEPNS1_13basic_ostreamIcS4_EE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion10FindFormatEPKc Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel8OBPlugin9GetPluginEPKcS2_ Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel8OBPlugin9GetPluginEPKcS2_ Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion10ReadStringEPNS_6OBBaseENSt3__112basic_stringIcNS3_11char_traitsIcEENS3_9allocatorIcEEEE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion14SetStartAndEndEv Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion19RegisterOptionParamENSt3__112basic_stringIcNS1_11char_traitsIcEENS1_9allocatorIcEEEEPNS_8OBFormatEiNS0_11Option_typeE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: LLVMFuzzerTestOneInput Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.667 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion14SetStartAndEndEv Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.668 INFO engine_input - analysis_func: Generating input for fuzz_obconversion_sdf Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.668 INFO calltree_analysis - __init__: Creating FuzzCalltreeAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.668 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversionC2EPNSt3__113basic_istreamIcNS1_11char_traitsIcEEEEPNS1_13basic_ostreamIcS4_EE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.668 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversionC2EPNSt3__113basic_istreamIcNS1_11char_traitsIcEEEEPNS1_13basic_ostreamIcS4_EE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.668 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion10FindFormatEPKc Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.669 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel8OBPlugin9GetPluginEPKcS2_ Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.669 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel8OBPlugin9GetPluginEPKcS2_ Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.669 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion10ReadStringEPNS_6OBBaseENSt3__112basic_stringIcNS3_11char_traitsIcEENS3_9allocatorIcEEEE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.669 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion14SetStartAndEndEv Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.669 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion19RegisterOptionParamENSt3__112basic_stringIcNS1_11char_traitsIcEENS1_9allocatorIcEEEEPNS_8OBFormatEiNS0_11Option_typeE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.669 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: LLVMFuzzerTestOneInput Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.669 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion14SetStartAndEndEv Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.669 INFO engine_input - analysis_func: Generating input for fuzz_convert Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO calltree_analysis - __init__: Creating FuzzCalltreeAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversionC2EPNSt3__113basic_istreamIcNS1_11char_traitsIcEEEEPNS1_13basic_ostreamIcS4_EE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversionC2EPNSt3__113basic_istreamIcNS1_11char_traitsIcEEEEPNS1_13basic_ostreamIcS4_EE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion10FindFormatEPKc Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel8OBPlugin9GetPluginEPKcS2_ Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel16OBMessageHandler10ThrowErrorERKNSt3__112basic_stringIcNS1_11char_traitsIcEENS1_9allocatorIcEEEES9_NS_14obMessageLevelENS_14errorQualifierE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel8OBPlugin9GetPluginEPKcS2_ Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion14SetStartAndEndEv Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion7ConvertEPNSt3__113basic_istreamIcNS1_11char_traitsIcEEEEPNS1_13basic_ostreamIcS4_EE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion7ConvertEPNSt3__113basic_istreamIcNS1_11char_traitsIcEEEEPNS1_13basic_ostreamIcS4_EE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.670 INFO engine_input - get_fuzzer_focus_function_section: Found focus function: _ZN9OpenBabel12OBConversion19RegisterOptionParamENSt3__112basic_stringIcNS1_11char_traitsIcEENS1_9allocatorIcEEEEPNS_8OBFormatEiNS0_11Option_typeE Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.671 INFO engine_input - analysis_func: - Completed analysis FuzzEngineInputAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.671 INFO runtime_coverage_analysis - analysis_func: - Running analysis RuntimeCoverageAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.671 INFO runtime_coverage_analysis - get_low_cov_high_line_funcs: Extracting low cov high line funcs Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.680 INFO runtime_coverage_analysis - analysis_func: - Completed analysis RuntimeCoverageAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:13.680 INFO filepath_analyser - analysis_func: - Running analysis FilePathAnalyser Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:20.977 INFO metadata - analysis_func: - Running analysis MetadataAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:20.977 INFO metadata - analysis_func: - Completed analysis MetadataAnalysis Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:20.977 INFO annotated_cfg - __init__: Creating annotated CFG Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:20.977 INFO annotated_cfg - analysis_func: Creating annotated CFGs Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:20.977 INFO annotated_cfg - analysis_func: Analysing: fuzz_obconversion_smiles Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:20.979 INFO annotated_cfg - analysis_func: Analysing: fuzz_obconversion_sdf Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:20.981 INFO annotated_cfg - analysis_func: Analysing: fuzz_convert Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:20.985 INFO utils - get_target_coverage_url: Extracting coverage for https://storage.googleapis.com/oss-fuzz-coverage/openbabel/reports/20250117/linux -- fuzz_obconversion_smiles Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:20.985 INFO utils - get_target_coverage_url: Extracting coverage for https://storage.googleapis.com/oss-fuzz-coverage/openbabel/reports/20250117/linux -- fuzz_obconversion_sdf Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:20.985 INFO utils - get_target_coverage_url: Extracting coverage for https://storage.googleapis.com/oss-fuzz-coverage/openbabel/reports/20250117/linux -- fuzz_convert Step #6 - "compile-libfuzzer-introspector-x86_64": Loading report: Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:21.248 INFO debug_info - extract_all_functions_in_debug_info: Extracting functions Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:23.184 INFO debug_info - extract_all_functions_in_debug_info: Extracting functions Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:24.988 INFO debug_info - extract_all_functions_in_debug_info: Extracting functions Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:24:26.584 INFO debug_info - load_debug_all_yaml_files: Set base loader to use CSafeLoader Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:26:16.128 INFO debug_info - load_debug_all_yaml_files: Set base loader to use CSafeLoader Step #6 - "compile-libfuzzer-introspector-x86_64": Correlating Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.297 INFO debug_info - correlate_debugged_function_to_debug_types: Creating dictionary Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.298 INFO debug_info - create_friendly_debug_types: Have to create for 365812 addresses Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.587 INFO debug_info - create_friendly_debug_types: Idx: 2500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.601 INFO debug_info - create_friendly_debug_types: Idx: 5000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.614 INFO debug_info - create_friendly_debug_types: Idx: 7500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.628 INFO debug_info - create_friendly_debug_types: Idx: 10000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.642 INFO debug_info - create_friendly_debug_types: Idx: 12500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.656 INFO debug_info - create_friendly_debug_types: Idx: 15000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.670 INFO debug_info - create_friendly_debug_types: Idx: 17500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.685 INFO debug_info - create_friendly_debug_types: Idx: 20000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.700 INFO debug_info - create_friendly_debug_types: Idx: 22500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.715 INFO debug_info - create_friendly_debug_types: Idx: 25000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.730 INFO debug_info - create_friendly_debug_types: Idx: 27500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.744 INFO debug_info - create_friendly_debug_types: Idx: 30000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.758 INFO debug_info - create_friendly_debug_types: Idx: 32500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.772 INFO debug_info - create_friendly_debug_types: Idx: 35000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.786 INFO debug_info - create_friendly_debug_types: Idx: 37500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.800 INFO debug_info - create_friendly_debug_types: Idx: 40000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.816 INFO debug_info - create_friendly_debug_types: Idx: 42500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.832 INFO debug_info - create_friendly_debug_types: Idx: 45000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.849 INFO debug_info - create_friendly_debug_types: Idx: 47500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.865 INFO debug_info - create_friendly_debug_types: Idx: 50000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.881 INFO debug_info - create_friendly_debug_types: Idx: 52500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.898 INFO debug_info - create_friendly_debug_types: Idx: 55000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.913 INFO debug_info - create_friendly_debug_types: Idx: 57500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.928 INFO debug_info - create_friendly_debug_types: Idx: 60000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.943 INFO debug_info - create_friendly_debug_types: Idx: 62500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.957 INFO debug_info - create_friendly_debug_types: Idx: 65000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.973 INFO debug_info - create_friendly_debug_types: Idx: 67500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:36.988 INFO debug_info - create_friendly_debug_types: Idx: 70000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.003 INFO debug_info - create_friendly_debug_types: Idx: 72500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.017 INFO debug_info - create_friendly_debug_types: Idx: 75000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.032 INFO debug_info - create_friendly_debug_types: Idx: 77500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.047 INFO debug_info - create_friendly_debug_types: Idx: 80000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.062 INFO debug_info - create_friendly_debug_types: Idx: 82500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.076 INFO debug_info - create_friendly_debug_types: Idx: 85000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.092 INFO debug_info - create_friendly_debug_types: Idx: 87500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.106 INFO debug_info - create_friendly_debug_types: Idx: 90000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.120 INFO debug_info - create_friendly_debug_types: Idx: 92500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.136 INFO debug_info - create_friendly_debug_types: Idx: 95000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.150 INFO debug_info - create_friendly_debug_types: Idx: 97500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.164 INFO debug_info - create_friendly_debug_types: Idx: 100000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.179 INFO debug_info - create_friendly_debug_types: Idx: 102500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.195 INFO debug_info - create_friendly_debug_types: Idx: 105000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.213 INFO debug_info - create_friendly_debug_types: Idx: 107500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.232 INFO debug_info - create_friendly_debug_types: Idx: 110000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.251 INFO debug_info - create_friendly_debug_types: Idx: 112500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.269 INFO debug_info - create_friendly_debug_types: Idx: 115000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.287 INFO debug_info - create_friendly_debug_types: Idx: 117500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.306 INFO debug_info - create_friendly_debug_types: Idx: 120000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.325 INFO debug_info - create_friendly_debug_types: Idx: 122500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.341 INFO debug_info - create_friendly_debug_types: Idx: 125000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.357 INFO debug_info - create_friendly_debug_types: Idx: 127500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.373 INFO debug_info - create_friendly_debug_types: Idx: 130000 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.390 INFO debug_info - create_friendly_debug_types: Idx: 132500 Step #6 - "compile-libfuzzer-introspector-x86_64": 2025-01-17 10:27:37.407 INFO debug_info - 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"compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__functional/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__functional/binary_function.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__functional/hash.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__functional/identity.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__functional/operations.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__functional/unary_function.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__fwd/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__fwd/fstream.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__fwd/ios.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__fwd/istream.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__fwd/ostream.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__fwd/sstream.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__fwd/streambuf.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__fwd/string.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__ios/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__ios/fpos.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/advance.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/back_insert_iterator.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/distance.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/istream_iterator.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/istreambuf_iterator.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/iterator.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/iterator_traits.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/move_iterator.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/next.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/ostream_iterator.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/ostreambuf_iterator.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/prev.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/reverse_iterator.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__iterator/wrap_iter.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__math/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__math/exponential_functions.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__math/inverse_trigonometric_functions.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__math/modulo.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__math/roots.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__math/rounding_functions.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__math/traits.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__math/trigonometric_functions.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/allocate_at_least.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/allocation_guard.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/allocator.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/allocator_destructor.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/allocator_traits.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/compressed_pair.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/construct_at.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/destruct_n.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/pointer_traits.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/shared_ptr.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/swap_allocator.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/temporary_buffer.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/uninitialized_algorithms.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__memory/unique_ptr.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__string/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__string/char_traits.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__string/constexpr_c_functions.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__tuple/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__tuple/tuple_indices.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__tuple/tuple_types.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/add_lvalue_reference.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/can_extract_key.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/datasizeof.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/enable_if.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/integral_constant.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/invoke.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/is_swappable.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/make_unsigned.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/nat.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/promote.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/remove_cv.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/remove_reference.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__type_traits/type_identity.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__utility/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__utility/convert_to_integral.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__utility/exception_guard.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__utility/pair.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__utility/piecewise_construct.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/include/c++/v1/__utility/swap.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/lib/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/lib/clang/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/lib/clang/18/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/lib/clang/18/include/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/lib/clang/18/include/__stdarg_va_list.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/lib/clang/18/include/__stddef_max_align_t.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/lib/clang/18/include/__stddef_ptrdiff_t.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/lib/clang/18/include/__stddef_size_t.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/lib/clang/18/include/fuzzer/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/usr/local/lib/clang/18/include/fuzzer/FuzzedDataProvider.h Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/projects/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/projects/example/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/projects/example/my-api-repo/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/projects/example/my-api-repo/do_stuff_unittest.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/projects/tinyxml2/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/projects/tinyxml2/xmltest.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/projects/tinyxml2/xmltest2.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/projects/upx/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/projects/upx/fuzzers/ Step #6 - "compile-libfuzzer-introspector-x86_64": source-code/workspace/oss-fuzz/projects/upx/fuzzers/test_packed_file_fuzzer.cpp Step #6 - "compile-libfuzzer-introspector-x86_64": Step #6 - "compile-libfuzzer-introspector-x86_64": sent 2,518,780,041 bytes received 15,315 bytes 201,503,628.48 bytes/sec Step #6 - "compile-libfuzzer-introspector-x86_64": total size is 2,542,086,883 speedup is 1.01 Finished Step #6 - "compile-libfuzzer-introspector-x86_64" Starting Step #7 Step #7: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #7: CommandException: 1 files/objects could not be removed. Finished Step #7 Starting Step #8 Step #8: Already have image (with digest): gcr.io/cloud-builders/gsutil Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/summary.json [Content-Type=application/json]... Step #8: / [0/1.5k files][ 0.0 B/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/allFunctionsWithMain-11-fa37JncCHr.yaml [Content-Type=application/octet-stream]... Step #8: / [0/1.5k files][ 0.0 B/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/prism.js [Content-Type=text/javascript]... Step #8: / [0/1.5k files][ 13.2 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/allFunctionsWithMain-15-fa37JncCHr.yaml [Content-Type=application/octet-stream]... Step #8: / [0/1.5k files][ 67.2 KiB/ 2.4 GiB] 0% Done / [1/1.5k files][ 67.2 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/exe_to_fuzz_introspector_logs.yaml [Content-Type=application/octet-stream]... Step #8: / [1/1.5k files][ 67.2 KiB/ 2.4 GiB] 0% Done / [2/1.5k files][ 67.2 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.debug_info [Content-Type=application/octet-stream]... Step #8: / [2/1.5k files][ 67.9 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/fuzzerLogFile-0-SJmEFrxq4l.data [Content-Type=application/octet-stream]... Step #8: / [2/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.debug_all_functions [Content-Type=application/octet-stream]... Step #8: / [2/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/allFunctionsWithMain-21-fa37JncCHr.yaml [Content-Type=application/octet-stream]... Step #8: / [2/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done / [3/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/custom.js [Content-Type=text/javascript]... Step #8: / [3/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done / [4/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done / [5/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/allFunctionsWithMain-14-fa37JncCHr.yaml [Content-Type=application/octet-stream]... Step #8: / [5/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/fuzzerLogFile-0-SJmEFrxq4l.data.debug_all_types [Content-Type=application/octet-stream]... Step #8: / [5/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/fuzzerLogFile-0-vjQgmlAiKK.data.yaml [Content-Type=application/octet-stream]... Step #8: / [5/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/allFunctionsWithMain-0-fa37JncCHr.yaml [Content-Type=application/octet-stream]... Step #8: / [5/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done ==> NOTE: You are uploading one or more large file(s), which would run Step #8: significantly faster if you enable parallel composite uploads. This Step #8: feature can be enabled by editing the Step #8: "parallel_composite_upload_threshold" value in your .boto Step #8: configuration file. However, note that if you do this large files will Step #8: be uploaded as `composite objects Step #8: `_,which Step #8: means that any user who downloads such objects will need to have a Step #8: compiled crcmod installed (see "gsutil help crcmod"). This is because Step #8: without a compiled crcmod, computing checksums on composite objects is Step #8: so slow that gsutil disables downloads of composite objects. Step #8: Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/allFunctionsWithMain-1-fa37JncCHr.yaml [Content-Type=application/octet-stream]... Step #8: / [5/1.5k files][ 68.3 KiB/ 2.4 GiB] 0% Done Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/fuzzerLogFile-0-VsiTpjpDXV.data.yaml [Content-Type=application/octet-stream]... 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Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/yasaraformat.cpp [Content-Type=text/x-c++src]... Step #8: / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 92% Done 97.0 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 92% Done 97.0 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 92% Done 97.0 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/svgformat.cpp [Content-Type=text/x-c++src]... Step #8: / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 92% Done 96.9 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 92% Done 97.0 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichirvr2.c [Content-Type=text/x-csrc]... 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Step #8: / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.0 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichiqueu.c [Content-Type=text/x-csrc]... Step #8: / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.0 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.0 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.0 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.1 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.1 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.1 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.1 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichilnct.c [Content-Type=text/x-csrc]... Step #8: / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.1 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichicano.c [Content-Type=text/x-csrc]... Step #8: / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.2 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.2 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichiprt2.c [Content-Type=text/x-csrc]... Step #8: / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.2 MiB/s ETA 00:00:02 / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.3 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichimake.c [Content-Type=text/x-csrc]... Step #8: / [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.2 MiB/s ETA 00:00:02 - Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/runichi.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.3 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichican2.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.3 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ikey_dll.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.3 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichirvr1.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.3 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.3 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichister.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.3 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichimap2.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.3 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.3 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichicans.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.3 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichitaut.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.4 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/strutil.c [Content-Type=text/x-csrc]... Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichiprt1.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.4 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.5 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichiread.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.4 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichiring.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.5 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/util.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.5 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ikey_base26.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.5 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/inchi_dll.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichiisot.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichimak2.c [Content-Type=text/x-csrc]... Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichirvr4.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichiprt3.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichirvr6.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichimap4.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichi_io.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/inchi_dll_a.c [Content-Type=text/x-csrc]... Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/ichinorm.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.6 MiB/s ETA 00:00:02 - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.7 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/sha2.c [Content-Type=text/x-csrc]... Step #8: - [1.2k/1.5k files][ 2.2 GiB/ 2.4 GiB] 93% Done 97.8 MiB/s ETA 00:00:02 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/src/formats/libinchi/inchi_dll_main.c [Content-Type=text/x-csrc]... 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Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/threads.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/parserInternals.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/HTMLparser.h [Content-Type=text/x-chdr]... 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Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/chvalid.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/pattern.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/xmlstring.h [Content-Type=text/x-chdr]... 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Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.1 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.2 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.1 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/xinclude.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.1 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.1 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/schemasInternals.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.2 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/c14n.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.2 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/xmlautomata.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.2 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/DOCBparser.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.2 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/encoding.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.2 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/xmlschemastypes.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.2 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/xlink.h [Content-Type=text/x-chdr]... Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/xmlerror.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.2 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.2 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.2 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/tree.h [Content-Type=text/x-chdr]... 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Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/HTMLtree.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/xpath.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/scripts/R/examples/openbabelR/src/openbabel-R.cpp [Content-Type=text/x-c++src]... Step #8: Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/include/libxml/xmlschemas.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 99.0 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.9 MiB/s ETA 00:00:00 Copying file:///workspace/out/libfuzzer-introspector-x86_64/inspector/light/source_files/src/openbabel/data/chemdrawcdx.h [Content-Type=text/x-chdr]... Step #8: | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.9 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.8 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.8 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.7 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.5 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.5 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.5 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.4 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.4 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.4 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.4 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.4 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.4 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.3 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.3 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.3 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 98.0 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.8 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.7 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.5 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.5 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.4 MiB/s ETA 00:00:00 | [1.4k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.3 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.3 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.2 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.2 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.2 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.2 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.0 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.0 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.0 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.0 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.0 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.0 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 96.9 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.0 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.0 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.1 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 99% Done 97.1 MiB/s ETA 00:00:00 | [1.5k/1.5k files][ 2.4 GiB/ 2.4 GiB] 100% Done 94.9 MiB/s ETA 00:00:00 Step #8: Operation completed over 1.5k objects/2.4 GiB. Finished Step #8 PUSH DONE